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(-) Description

Title :  CRYSTAL STRUCTURE OF HUMAN PAXILLIN LD4 MOTIF IN COMPLEX WITH FAB FRAGMENT
 
Authors :  M. Nocula-Lugowska, M. Lugowski, R. Salgia, A. A. Kossiakoff
Date :  04 Jan 15  (Deposition) - 01 Jul 15  (Release) - 31 May 17  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.00
Chains :  Asym. Unit :  A,B,C,D,E,F,G,H,I,J,K,L,a,c,e,g,h,j
Biol. Unit 1:  A,B,a  (1x)
Biol. Unit 2:  C,D,c  (1x)
Biol. Unit 3:  E,F,e  (1x)
Biol. Unit 4:  G,I,g  (1x)
Biol. Unit 5:  H,L,h  (1x)
Biol. Unit 6:  J,K,j  (1x)
Keywords :  Synthetic Antibody, Paxillin, Ld Motif, Immunoglobulin, Fab Fragment, Complex, Focal Adhesion, Cell Adhesion (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  M. Nocula-Lugowska, M. Lugowski, R. Salgia, A. A. Kossiakoff
Engineering Synthetic Antibody Inhibitors Specific For Ld2 Or Ld4 Motifs Of Paxillin.
J. Mol. Biol. V. 427 2532 2015
PubMed-ID: 26087144  |  Reference-DOI: 10.1016/J.JMB.2015.06.004

(-) Compounds

Molecule 1 - FAB HEAVY CHAIN
    Chains: A, C, E, G, H, J
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Expression System Vector Type: PHAGEMID
    Organism Common: HUMAN
    Organism Scientific: HOMO SAPIENS
    Organism Taxid: 9606
 
Molecule 2 - FAB LIGHT CHAIN
    Chains: B, D, F, I, K, L
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Expression System Vector Type: PHAGEMID
    Organism Common: HUMAN
    Organism Scientific: HOMO SAPIENS
    Organism Taxid: 9606
 
Molecule 3 - PAXILLIN LD4
    Chains: a, c, e, g, h, j
    Engineered: YES
    Organism Scientific: SYNTHETIC CONSTRUCT
    Organism Taxid: 32630
    Synthetic: YES

 Structural Features

(-) Chains, Units

  123456789101112131415161718
Asymmetric Unit : ABCDEFGHIJKLaceghj
Biological Unit 1 (1x): AB          a     
Biological Unit 2 (1x):   CD         c    
Biological Unit 3 (1x):     EF        e   
Biological Unit 4 (1x):       G I      g  
Biological Unit 5 (1x):        H   L    h 
Biological Unit 6 (1x):          JK      j

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (5, 26)

Asymmetric Unit (5, 26)
No.NameCountTypeFull Name
1ACE2Mod. Amino AcidACETYL GROUP
2ACT1Ligand/IonACETATE ION
3GOL20Ligand/IonGLYCEROL
4LDA1Ligand/IonLAURYL DIMETHYLAMINE-N-OXIDE
5PO42Ligand/IonPHOSPHATE ION
Biological Unit 1 (1, 2)
No.NameCountTypeFull Name
1ACE-1Mod. Amino AcidACETYL GROUP
2ACT-1Ligand/IonACETATE ION
3GOL2Ligand/IonGLYCEROL
4LDA-1Ligand/IonLAURYL DIMETHYLAMINE-N-OXIDE
5PO4-1Ligand/IonPHOSPHATE ION
Biological Unit 2 (2, 4)
No.NameCountTypeFull Name
1ACE-1Mod. Amino AcidACETYL GROUP
2ACT-1Ligand/IonACETATE ION
3GOL3Ligand/IonGLYCEROL
4LDA-1Ligand/IonLAURYL DIMETHYLAMINE-N-OXIDE
5PO41Ligand/IonPHOSPHATE ION
Biological Unit 3 (4, 7)
No.NameCountTypeFull Name
1ACE-1Mod. Amino AcidACETYL GROUP
2ACT1Ligand/IonACETATE ION
3GOL4Ligand/IonGLYCEROL
4LDA1Ligand/IonLAURYL DIMETHYLAMINE-N-OXIDE
5PO41Ligand/IonPHOSPHATE ION
Biological Unit 4 (1, 4)
No.NameCountTypeFull Name
1ACE-1Mod. Amino AcidACETYL GROUP
2ACT-1Ligand/IonACETATE ION
3GOL4Ligand/IonGLYCEROL
4LDA-1Ligand/IonLAURYL DIMETHYLAMINE-N-OXIDE
5PO4-1Ligand/IonPHOSPHATE ION
Biological Unit 5 (2, 5)
No.NameCountTypeFull Name
1ACE1Mod. Amino AcidACETYL GROUP
2ACT-1Ligand/IonACETATE ION
3GOL4Ligand/IonGLYCEROL
4LDA-1Ligand/IonLAURYL DIMETHYLAMINE-N-OXIDE
5PO4-1Ligand/IonPHOSPHATE ION
Biological Unit 6 (2, 4)
No.NameCountTypeFull Name
1ACE1Mod. Amino AcidACETYL GROUP
2ACT-1Ligand/IonACETATE ION
3GOL3Ligand/IonGLYCEROL
4LDA-1Ligand/IonLAURYL DIMETHYLAMINE-N-OXIDE
5PO4-1Ligand/IonPHOSPHATE ION

(-) Sites  (26, 26)

Asymmetric Unit (26, 26)
No.NameEvidenceResiduesDescription
01AC1SOFTWARETHR B:5 , GLN B:6 , PHE B:98 , GLN B:100 , HOH B:434binding site for residue GOL B 301
02AC2SOFTWAREHIS A:164 , THR B:164 , GLU B:165 , GLN B:166 , ASP B:167 , HOH B:432 , HOH B:448binding site for residue GOL B 302
03AC3SOFTWARESER C:130 , HOH C:423 , HOH C:445 , SER D:114 , PHE D:116 , LYS D:207 , GLY E:134 , THR E:135 , PRO E:185binding site for residue GOL C 301
04AC4SOFTWAREGLY C:134 , THR C:135 , HOH C:402 , HOH C:428 , HOH C:450 , SER F:114 , ASN F:138 , HOH F:420 , HOH F:482binding site for residue GOL C 302
05AC5SOFTWARELYS C:214 , TYR D:186 , ASN D:210 , ARG D:211 , GLY D:212 , GLU D:213binding site for residue GOL D 301
06AC6SOFTWARELYS C:129 , HOH C:430 , THR D:206 , LYS D:207 , HOH D:402 , HOH D:408 , HOH D:431 , HOH D:433 , HOH D:456 , GLY E:133 , HOH E:326binding site for residue PO4 D 302
07AC7SOFTWAREGLN F:37 , PRO F:59 , PHE F:62 , GLU F:81 , ASP F:82binding site for residue GOL F 301
08AC8SOFTWAREGLN F:155 , LEU F:181 , HIS F:189 , HOH F:459 , HOH F:474 , THR K:72binding site for residue GOL F 302
09AC9SOFTWAREPHE E:166 , PRO E:167 , VAL E:169 , SER E:177 , LEU E:178 , SER E:179 , HOH E:349 , SER F:162 , SER F:176 , SER F:177 , THR F:178binding site for residue GOL F 303
10AD1SOFTWARESER C:132 , GLY C:133 , LYS F:207 , HOH F:404 , HOH F:436 , HOH F:448 , HOH F:453binding site for residue PO4 F 304
11AD2SOFTWAREASP F:70 , THR K:129binding site for residue ACT F 305
12AD3SOFTWAREARG F:18 , THR F:20 , HOH F:424 , SER G:53 , THR G:73 , GOL G:301 , ALA K:153 , GLN K:155 , ASN K:158 , HIS K:189binding site for residue LDA F 306
13AD4SOFTWAREARG F:66 , GLY F:68binding site for residue GOL F 307
14AD5SOFTWARELDA F:306 , SER G:52A , SER G:53 , GLY G:55 , ASP K:151 , ASN K:152binding site for residue GOL G 301
15AD6SOFTWARESER H:161 , ARG K:108 , THR K:109binding site for residue GOL H 301
16AD7SOFTWAREPHE H:166 , PRO H:167 , VAL H:169 , SER H:177 , LEU H:178 , SER H:179 , GLN L:160 , SER L:176 , THR L:178 , HOH L:407binding site for residue GOL H 302
17AD8SOFTWAREALA I:112 , SER I:114 , ASN I:137 , ASN I:138binding site for residue GOL I 301
18AD9SOFTWAREVAL G:163 , HIS G:164 , THR I:164 , GLU I:165 , ASP I:167 , HOH I:419 , HOH I:426binding site for residue GOL I 302
19AE1SOFTWAREPHE G:166 , PRO G:167 , VAL G:169 , SER G:177 , LEU G:178 , SER G:179 , GLN I:160 , SER I:162 , SER I:176 , THR I:178binding site for residue GOL I 303
20AE2SOFTWARELYS J:117 , GLY J:118binding site for residue ACE J 301
21AE3SOFTWAREHIS J:164 , GLU K:165 , ASP K:167 , HOH K:416 , HOH K:445binding site for residue GOL K 301
22AE4SOFTWAREGLN F:199 , HIS K:198 , GLN K:199 , LEU K:201 , HOH K:444binding site for residue GOL K 302
23AE5SOFTWAREALA K:112 , GLY K:200binding site for residue GOL K 303
24AE6SOFTWAREPHE H:122 , PRO H:123 , LEU H:124 , LEU H:141 , PHE L:118 , PRO L:119 , PRO L:120 , SER L:121 , GLN L:124 , SER L:131binding site for residue GOL L 301
25AE7SOFTWARESER E:30 , SER E:53 , THR E:73 , ARG L:18 , SER L:76binding site for residue GOL L 302
26AE8SOFTWARESER E:74 , ARG L:61binding site for residue ACE L 303

(-) SS Bonds  (26, 26)

Asymmetric Unit
No.Residues
1A:22 -A:92
2A:140 -A:196
3B:23 -B:88
4B:134 -B:194
5C:22 -C:92
6C:140 -C:196
7C:216 -D:214
8D:23 -D:88
9D:134 -D:194
10E:22 -E:92
11E:140 -E:196
12F:23 -F:88
13F:134 -F:194
14G:22 -G:92
15G:140 -G:196
16H:22 -H:92
17H:140 -H:196
18I:23 -I:88
19I:134 -I:194
20J:22 -J:92
21J:140 -J:196
22J:216 -K:214
23K:23 -K:88
24K:134 -K:194
25L:23 -L:88
26L:134 -L:194

(-) Cis Peptide Bonds  (34, 34)

Asymmetric Unit
No.Residues
1Ser A:130 -Thr A:131
2Gly A:133 -Gly A:134
3Phe A:146 -Pro A:147
4Glu A:148 -Pro A:149
5Lys A:214 -Ser A:215
6Met B:4 -Thr B:5
7Lys B:94A-Glu B:94B
8Tyr B:140 -Pro B:141
9Phe C:146 -Pro C:147
10Glu C:148 -Pro C:149
11Thr D:5 -Gln D:6
12Lys D:94A-Glu D:94B
13Tyr D:140 -Pro D:141
14Phe E:146 -Pro E:147
15Glu E:148 -Pro E:149
16Thr F:5 -Gln F:6
17Cys F:23 -Arg F:24
18Ser F:28 -Val F:29
19Lys F:94A-Glu F:94B
20Tyr F:140 -Pro F:141
21Phe G:146 -Pro G:147
22Glu G:148 -Pro G:149
23Phe H:146 -Pro H:147
24Glu H:148 -Pro H:149
25Met I:4 -Thr I:5
26Lys I:94A-Glu I:94B
27Tyr I:140 -Pro I:141
28Phe J:146 -Pro J:147
29Glu J:148 -Pro J:149
30Lys K:94A-Glu K:94B
31Tyr K:140 -Pro K:141
32Lys L:94A-Glu L:94B
33Tyr L:140 -Pro L:141
34Arg L:211 -Gly L:212

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4XH2)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4XH2)

(-) Exons   (0, 0)

(no "Exon" information available for 4XH2)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:220
                                                                                                                                                                                                                                                             
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeeee..eee.....eeeeeeee........eeeeee.....eeeeeee......eee.......eeeeee....eeeeee...hhhhheeeeeeee....eeee...eeeee........eeeee..........eeeeeeeeeee.....eeee.hhh....eee...ee.....eeeeeeeeee.hhhhh...eeeeeehhhheeeeee..... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                4xh2 A    0 SEVQLVESGGGLVQPGGSLRLSCAASGFNVSSYSIHWVRQAPGKGLEWVAYISSSSGYTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARTWYYGFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKS  215
                                     9        19        29        39        49   |    58        68        78    ||| 85        95  |||  105       115       125       135       145       155       165       175       185       195       205       215
                                                                               52A                            82A||              98||                                                                                                                   
                                                                                                               82B|              100|                                                                                                                   
                                                                                                                82C              100A                                                                                                                   


Chain B from PDB  Type:PROTEIN  Length:210
                                                                                                                                                                                                                                                   
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .....eeeee....eeeee......eeeeeee......eeeee...ee.......eeeeee..eeeeee...hhhhh.eeeeeee......eee...eeeee.......eeeee..hhhhhhh.eeeeeeeeeee.....eeeeee..eeee..eeeee.........eeeeeeeeeehhhhhh..eeeeeee.......eeeeee.... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                4xh2 B    4 MTQSPSSLSASVGDRVTITCRSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQFKRQKEPITFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC  214
                                    13        23||      36        46        56        66        76        86       94B       104       114       124       134       144       154       164       174       184       194       204       214
                                               24|                                                                94A|                                                                                                                        
                                                28                                                                 94B                                                                                                                        


Chain C from PDB  Type:PROTEIN  Length:220
                                                                                                                                                                                                                                                             
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeee...ee.....eeeeeeee........eeeeee.....eeeeeeee....eeee.......eeeeee....eeeeee...hhhhheeeeeeee....eeee...eeeee........eeeee...hhhhh..eeeeeeeeeee.....eeee.hhh....eee...ee.....eeeeeeeeee.hhh.....eeeeeehhhheeeeee...... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                4xh2 C    1 EVQLVESGGGLVQPGGSLRLSCAASGFNVSSYSIHWVRQAPGKGLEWVAYISSSSGYTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARTWYYGFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC  216
                                    10        20        30        40        50  |     59        69        79   |||  86        96 |||   106       116       126       136       146       156       166       176       186       196       206       216
                                                                              52A                            82A||              98||                                                                                                                    
                                                                                                              82B|              100|                                                                                                                    
                                                                                                               82C              100A                                                                                                                    


Chain D from PDB  Type:PROTEIN  Length:210
                                                                                                                                                                                                                                                   
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .....eeeee....eeeee......eeeeeee......eeeee...ee.......eeeeee..eeeeee...hhhhh.eeeeeee......eee...eeeee.......eeeee..hhhhhhh.eeeeeeeeeee.....eeeeee..eeee..eeeee.........eeeeeeeeeehhhhh...eeeeeee.......eeeeee.... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                4xh2 D    4 MTQSPSSLSASVGDRVTITCRSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQFKRQKEPITFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC  214
                                    13        23||      36        46        56        66        76        86       94B       104       114       124       134       144       154       164       174       184       194       204       214
                                               24|                                                                94A|                                                                                                                        
                                                28                                                                 94B                                                                                                                        


Chain E from PDB  Type:PROTEIN  Length:220
                                                                                                                                                                                                                                                             
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....eeeee..eee.....eeeeeeee..hhhhh.eeeeee.....eeeeeee......eee.......eeeeee....eeeeee...hhhhheeeeeeee....eeee...eeeee........eeeee..........eeeeeeeeeee.....eeee.hhh.....ee...ee.....eeeeeeeeee.hhhhhh..eeeeeehhhheeeeee.... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                4xh2 E   -1 ISEVQLVESGGGLVQPGGSLRLSCAASGFNVSSYSIHWVRQAPGKGLEWVAYISSSSGYTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARTWYYGFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK  214
                                     8        18        28        38        48    |   57        67        77     |||84        94   ||| 104       114       124       134       144       154       164       174       184       194       204       214
                                                                                52A                            82A||              98||                                                                                                                  
                                                                                                                82B|              100|                                                                                                                  
                                                                                                                 82C              100A                                                                                                                  


Chain F from PDB  Type:PROTEIN  Length:209
                                                                                                                                                                                                                                                  
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....eeeee....eeeeee.....eeeeeee......eeeee...ee.......eeeeee..eeeeee...hhhhh.eeeeeee......eee...eeeee.......eeeee..hhhhhh..eeeeeeeeeee.....eeeeee..eeee..eeeee.........eeeeeeeeeehhhhh...eeeeeee.......eeeeee.... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                4xh2 F    5 TQSPSSLSASVGDRVTITCRSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQFKRQKEPITFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC  214
                                    14        24|       37        47        57        67        77        87       |95       105       115       125       135       145       155       165       175       185       195       205         
                                              24|                                                                94A|                                                                                                                        
                                               28                                                                 94B                                                                                                                        


Chain G from PDB  Type:PROTEIN  Length:220
                                                                                                                                                                                                                                                             
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeeee..eee.....eeeeeeee........eeeeee.....eeeeeee......eee.......eeeeee....eeeeee...hhhhheeeeeeee....eeee...eeeee........eeeee...........eeeeeeeeee.....eeee.hhh....eee...ee.....eeeeeeeee..........eeeeee....eeeeee..... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                4xh2 G    0 SEVQLVESGGGLVQPGGSLRLSCAASGFNVSSYSIHWVRQAPGKGLEWVAYISSSSGYTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARTWYYGFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKS  215
                                     9        19        29        39        49   |    58        68        78    ||| 85        95  |||  105       115       125       135       145       155       165       175       185       195       205       215
                                                                               52A                            82A||              98||                                                                                                                   
                                                                                                               82B|              100|                                                                                                                   
                                                                                                                82C              100A                                                                                                                   


Chain H from PDB  Type:PROTEIN  Length:213
                                                                                                                                                                                                                                                      
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....eeeee..eee.....eeeeeeee........eeeeee.....eeeeeee......eee.......eeeeee....eeeeee...hhhhheeeeeeee....eeee...eeeee........eeeee....eeeeeeeeeee.....eeee.hhh....eee...ee.....eeeeeeeeee.hhh.....eeeeeehhhheeeeee... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                4xh2 H   -1 ISEVQLVESGGGLVQPGGSLRLSCAASGFNVSSYSIHWVRQAPGKGLEWVAYISSSSGYTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARTWYYGFDYWGQGTLVTVSSASTKGPSVFPLAPSGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP  213
                                     8        18        28        38        48    |   57        67        77     |||84        94   ||| 104       114       124  ||   140       150       160       170       180       190       200       210   
                                                                                52A                            82A||              98||                        127|                                                                               
                                                                                                                82B|              100|                         134                                                                               
                                                                                                                 82C              100A                                                                                                           


Chain I from PDB  Type:PROTEIN  Length:209
                                                                                                                                                                                                                                                  
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....eeeee....eeeee.....eeeeeee......eeeee...ee.......eeeeee..eeeeee...hhhhh.eeeeeee......eee...eeeee.......eeeee..hhhhhhh.eeeeeeeeeee.....eeeeee..eeee..eeeee.........eeeeeeeeeehhhhh...eeeeeee.......eeeeee.... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                4xh2 I    4 MTQSPSSLSASVGDRVTITCRVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQFKRQKEPITFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC  214
                                    13        23||      37        47        57        67        77        87       |95       105       115       125       135       145       155       165       175       185       195       205         
                                               24|                                                               94A|                                                                                                                        
                                                29                                                                94B                                                                                                                        


Chain J from PDB  Type:PROTEIN  Length:223
                                                                                                                                                                                                                                                                
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....eeeee..eee.....eeeeeeee..hhhhh.eeeeee.....eeeeeeee....eeee.......eeeeee....eeeeee...hhhhheeeeeeee....eeee...eeeee........eeeee..........eeeeeeeeeee.....eeee.hhh....eee...ee.....eeeeeeeeee.hhh....eeeeeeehhhheeeeeee...... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                4xh2 J   -1 ISEVQLVESGGGLVQPGGSLRLSCAASGFNVSSYSIHWVRQAPGKGLEWVAYISSSSGYTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARTWYYGFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCx  301
                                     8        18        28        38        48    |   57        67        77     |||84        94   ||| 104       114       124       134       144       154       164       174       184       194       204       214 ||
                                                                                52A                            82A||              98||                                                                                                                 216|
                                                                                                                82B|              100|                                                                                                                  301-ACE
                                                                                                                 82C              100A                                                                                                                     


Chain K from PDB  Type:PROTEIN  Length:210
                                                                                                                                                                                                                                                   
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ....eeeee....eeeee.......eeeeeee......eeeee...ee.......eeeeee..eeeeee...hhhhh.eeeeeee......eee...eeeee.......eeeee..hhhhhh..eeeeeeeeeee.....eeeeee..eeee..eeeee.........eeeeeeeeeehhhhhhh.eeeeeee.......eeeeee.... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                4xh2 K    5 TQSPSSLSASVGDRVTITCRASVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQFKRQKEPITFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC  214
                                    14        24||      36        46        56        66        76        86       94B       104       114       124       134       144       154       164       174       184       194       204       214
                                               25|                                                                94A|                                                                                                                        
                                                28                                                                 94B                                                                                                                        


Chain L from PDB  Type:PROTEIN  Length:209
                                                                                                                                                                                                                                                  
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....eeeee....eeeee.....eeeeeee......eeeee...ee.......eeeeee..eeeeee...hhhhheeeeeeee......eee...eeeee.......eeeee..hhhhhhh.eeeeeeeeeee.....eeeeee..eeee..eeeee.........eeeeeeeeeehhhhhh..eeeeeee.......eeeeee.... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                4xh2 L    4 MTQSPSSLSASVGDRVTITCRVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQFKRQKEPITFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC  214
                                    13        23||      37        47        57        67        77        87       |95       105       115       125       135       145       155       165       175       185       195       205         
                                               24|                                                               94A|                                                                                                                        
                                                29                                                                94B                                                                                                                        


Chain a from PDB  Type:PROTEIN  Length:16
                                                 
               SCOP domains ---------------- SCOP domains
               CATH domains ---------------- CATH domains
               Pfam domains ---------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) ---------------- SAPs(SNPs)
                    PROSITE ---------------- PROSITE
                 Transcript ---------------- Transcript
                4xh2 a    3 GSATRELDELMASLSD   18
                                    12      


Chain c from PDB  Type:PROTEIN  Length:11
                                            
               SCOP domains ----------- SCOP domains
               CATH domains ----------- CATH domains
               Pfam domains ----------- Pfam domains
         Sec.struct. author .hhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ----------- SAPs(SNPs)
                    PROSITE ----------- PROSITE
                 Transcript ----------- Transcript
                4xh2 c    5 ATRELDELMAS   15
                                    14 


Chain e from PDB  Type:PROTEIN  Length:17
                                                  
               SCOP domains ----------------- SCOP domains
               CATH domains ----------------- CATH domains
               Pfam domains ----------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ----------------- SAPs(SNPs)
                    PROSITE ----------------- PROSITE
                 Transcript ----------------- Transcript
                4xh2 e    2 GGSATRELDELMASLSD   18
                                    11       


Chain g from PDB  Type:PROTEIN  Length:14
                                               
               SCOP domains -------------- SCOP domains
               CATH domains -------------- CATH domains
               Pfam domains -------------- Pfam domains
         Sec.struct. author ..hhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) -------------- SAPs(SNPs)
                    PROSITE -------------- PROSITE
                 Transcript -------------- Transcript
                4xh2 g    3 SATRELDELMASLS   16
                                    12    


Chain h from PDB  Type:PROTEIN  Length:12
                                             
               SCOP domains ------------ SCOP domains
               CATH domains ------------ CATH domains
               Pfam domains ------------ Pfam domains
         Sec.struct. author ..hhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------ SAPs(SNPs)
                    PROSITE ------------ PROSITE
                 Transcript ------------ Transcript
                4xh2 h    4 SATRELDELMAS   15
                                    13  


Chain j from PDB  Type:PROTEIN  Length:12
                                             
               SCOP domains ------------ SCOP domains
               CATH domains ------------ CATH domains
               Pfam domains ------------ Pfam domains
         Sec.struct. author .hhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ------------ SAPs(SNPs)
                    PROSITE ------------ PROSITE
                 Transcript ------------ Transcript
                4xh2 j    5 ATRELDELMASL   16
                                    14
   Legend:   → Mismatch (orange background)
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(-) Gene Ontology  (29, 29)

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 Related Entries

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        PAXI_HUMAN | P49023: 1kky 1kl0 1ow6 1ow7 1ow8 2k2r 2o9v 2vzd 2vzg 2vzi 3gm1 3py7 3rqe 3rqf 3rqg 3u3f 4edn 4r32 4xgz 5uwh

(-) Related Entries Specified in the PDB File

4xgz