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(-) Description

Title :  CRYSTAL STRUCTURE OF THE C-TERMINAL CALPONIN HOMOLOGY DOMAIN OF ALPHA PARVIN IN COMPLEX WITH PAXILLIN LD1 MOTIF
 
Authors :  S. Lorenz, I. Vakonakis, E. D. Lowe, I. D. Campbell, M. E. M. Noble, M. K. H
Date :  31 Jul 08  (Deposition) - 28 Oct 08  (Release) - 30 May 12  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.10
Chains :  Asym. Unit :  A,B,C,D
Biol. Unit 1:  A,C  (1x)
Biol. Unit 2:  B,D  (1x)
Keywords :  Calponin Homology Domain, Cell Membrane, Cell Adhesion, Metal-Binding, Cytoskeleton, Cell Junction, Actin-Binding, Phosphoprotein, Membrane, Ld1 Motif, Lim Domain (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  S. Lorenz, I. Vakonakis, E. D. Lowe, I. D. Campbell, M. E. M. Noble, M. K. Hoellerer
Structural Analysis Of The Interactions Between Paxillin Ld Motifs And Alpha-Parvin
Structure V. 16 1521 2008
PubMed-ID: 18940607  |  Reference-DOI: 10.1016/J.STR.2008.08.007

(-) Compounds

Molecule 1 - ALPHA-PARVIN
    ChainsA, B
    EngineeredYES
    Expression SystemESCHERICHIA COLI
    Expression System PlasmidPGEX-6P1
    Expression System StrainBL21
    Expression System Taxid511693
    FragmentC-TERMINAL CALPONIN HOMOLOGY DOMAIN, RESIDUES 242-372
    Organism CommonHUMAN
    Organism ScientificHOMO SAPIENS
    Organism Taxid9606
    SynonymCALPONIN-LIKE INTEGRIN-LINKED KINASE-BINDING PROTEIN, CH-ILKBP, MATRIX-REMODELING-ASSOCIATED PROTEIN 2, ACTOPAXIN
 
Molecule 2 - PAXILLIN
    ChainsC, D
    EngineeredYES
    FragmentPAXILLIN LD1 MOTIF, RESIDUES 1-20
    Organism CommonHUMAN
    Organism ScientificHOMO SAPIENS
    Organism Taxid9606
    SyntheticYES

 Structural Features

(-) Chains, Units

  1234
Asymmetric Unit ABCD
Biological Unit 1 (1x)A C 
Biological Unit 2 (1x) B D

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (4, 14)

Asymmetric Unit (4, 14)
No.NameCountTypeFull Name
1EDO7Ligand/Ion1,2-ETHANEDIOL
2GOL3Ligand/IonGLYCEROL
3PG42Ligand/IonTETRAETHYLENE GLYCOL
4PGE2Ligand/IonTRIETHYLENE GLYCOL
Biological Unit 1 (4, 7)
No.NameCountTypeFull Name
1EDO2Ligand/Ion1,2-ETHANEDIOL
2GOL2Ligand/IonGLYCEROL
3PG41Ligand/IonTETRAETHYLENE GLYCOL
4PGE2Ligand/IonTRIETHYLENE GLYCOL
Biological Unit 2 (3, 7)
No.NameCountTypeFull Name
1EDO5Ligand/Ion1,2-ETHANEDIOL
2GOL1Ligand/IonGLYCEROL
3PG41Ligand/IonTETRAETHYLENE GLYCOL
4PGE-1Ligand/IonTRIETHYLENE GLYCOL

(-) Sites  (14, 14)

Asymmetric Unit (14, 14)
No.NameEvidenceResiduesDescription
01AC1SOFTWAREASP B:348 , ASP B:353 , HOH D:2001BINDING SITE FOR RESIDUE EDO D1015
02AC2SOFTWAREHIS A:311 , PHE A:313 , PHE A:314 , LEU A:315 , LEU A:325BINDING SITE FOR RESIDUE PGE A1373
03AC3SOFTWAREPHE A:254 , LEU A:261 , PHE A:320 , GLU A:321 , GLU A:347 , ASN A:351 , ASP A:353 , LEU A:354 , LYS A:355 , PGE A:1375 , GOL A:1377BINDING SITE FOR RESIDUE PG4 A1374
04AC4SOFTWAREARG A:345 , ASP A:348 , PG4 A:1374BINDING SITE FOR RESIDUE PGE A1375
05AC5SOFTWARETYR A:306 , PHE A:307BINDING SITE FOR RESIDUE GOL A1376
06AC6SOFTWAREARG A:345 , GLU A:347 , CYS A:352 , ASP A:353 , LEU A:354 , PG4 A:1374BINDING SITE FOR RESIDUE GOL A1377
07AC7SOFTWARELEU B:310 , HIS B:311 , PHE B:313 , PHE B:314 , LEU B:315 , PHE B:320 , GLU B:321 , EDO B:1378 , HOH B:2038BINDING SITE FOR RESIDUE PG4 B1373
08AC8SOFTWARELEU B:279BINDING SITE FOR RESIDUE GOL B1374
09AC9SOFTWARESER B:328 , PHE B:329 , GLU B:332 , ARG B:345 , GLU B:347 , EDO B:1378BINDING SITE FOR RESIDUE EDO B1375
10BC1SOFTWAREGLN A:289 , ASP A:292 , TYR A:295BINDING SITE FOR RESIDUE EDO A1378
11BC2SOFTWARELEU A:298 , TYR A:306 , VAL B:308BINDING SITE FOR RESIDUE EDO A1379
12BC3SOFTWAREASP B:292 , TYR B:295BINDING SITE FOR RESIDUE EDO B1376
13BC4SOFTWARETHR B:288 , LYS B:323BINDING SITE FOR RESIDUE EDO B1377
14BC5SOFTWAREHIS B:311 , SER B:312 , GLU B:347 , PG4 B:1373 , EDO B:1375BINDING SITE FOR RESIDUE EDO B1378

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 2VZD)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 2VZD)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 2VZD)

(-) PROSITE Motifs  (1, 2)

Asymmetric Unit (1, 2)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1CHPS50021 Calponin homology domain profile.PARVA_HUMAN95-201
262-369
 
  2-
A:262-369
B:262-369
Biological Unit 1 (1, 1)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1CHPS50021 Calponin homology domain profile.PARVA_HUMAN95-201
262-369
 
  1-
A:262-369
-
Biological Unit 2 (1, 1)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1CHPS50021 Calponin homology domain profile.PARVA_HUMAN95-201
262-369
 
  1-
-
B:262-369

(-) Exons   (2, 4)

Asymmetric Unit (2, 4)
 ENSEMBLUniProtKBPDB
No.Transcript IDExonExon IDGenome LocationLengthIDLocationLengthCountLocationLength
1.1ENST000002283071ENSE00002150335chr12:120703563-120703420144PAXI_HUMAN1-552C:2-5
D:1-5
4
5
1.4bENST000002283074bENSE00001689444chr12:120662180-120661954227PAXI_HUMAN5-80762C:5-13
D:5-14
9
10
1.5bENST000002283075bENSE00001679472chr12:120661636-120661521116PAXI_HUMAN81-119390--
1.6ENST000002283076ENSE00001768793chr12:120660802-120660666137PAXI_HUMAN119-165470--
1.7ENST000002283077ENSE00001668346chr12:120660553-120660352202PAXI_HUMAN165-232680--
1.8ENST000002283078ENSE00001756096chr12:120659561-120659426136PAXI_HUMAN232-277460--
1.12ENST0000022830712ENSE00001729387chr12:120653464-120653363102PAXI_HUMAN278-311340--
1.13bENST0000022830713bENSE00001653040chr12:120653076-120652906171PAXI_HUMAN312-368570--
1.14ENST0000022830714ENSE00001670431chr12:120652801-120652628174PAXI_HUMAN369-426580--
1.15ENST0000022830715ENSE00001798560chr12:120652020-12065193982PAXI_HUMAN427-454280--
1.16ENST0000022830716ENSE00001667198chr12:120651793-120651645149PAXI_HUMAN454-503500--
1.17cENST0000022830717cENSE00001473236chr12:120650383-1206482512133PAXI_HUMAN504-591880--

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it)
Chain A from PDB  Type:PROTEIN  Length:127
 aligned with PARVA_HUMAN | Q9NVD7 from UniProtKB/Swiss-Prot  Length:372

    Alignment length:127
                                   255       265       275       285       295       305       315       325       335       345       355       365       
          PARVA_HUMAN   246 ERDAFDTLFDHAPDKLNVVKKTLITFVNKHLNKLNLEVTELETQFADGVYLVLLMGLLEGYFVPLHSFFLTPDSFEQKVLNVSFAFELMQDGGLEKPKPRPEDIVNCDLKSTLRVLYNLFTKYRNVE 372
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..hhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhh............hhhhhhhhhhhhh...hhhhh.....hhhhhhhhhhhhhhhhhhhh......hhhhhhh.hhhhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------CH  PDB: A:262-369 UniProt: 262-369                                                                         --- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2vzd A 246 ERDAFDTLFDHAPDKLNVVKKTLITFVNKHLNKLNLEVTELETQFADGVYLVLLMGLLEGYFVPLHSFFLTPDSFEQKVLNVSFAFELMQDGGLEKPKPRPEDIVNCDLKSTLRVLYNLFTKYRNVE 372
                                   255       265       275       285       295       305       315       325       335       345       355       365       

Chain B from PDB  Type:PROTEIN  Length:126
 aligned with PARVA_HUMAN | Q9NVD7 from UniProtKB/Swiss-Prot  Length:372

    Alignment length:126
                                   256       266       276       286       296       306       316       326       336       346       356       366      
          PARVA_HUMAN   247 RDAFDTLFDHAPDKLNVVKKTLITFVNKHLNKLNLEVTELETQFADGVYLVLLMGLLEGYFVPLHSFFLTPDSFEQKVLNVSFAFELMQDGGLEKPKPRPEDIVNCDLKSTLRVLYNLFTKYRNVE 372
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .hhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhh............hhhhhhhhhhhhh...hhhhh.....hhhhhhhhhhhhhhhhhhh.......hhhhhhh.hhhhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ---------------CH  PDB: B:262-369 UniProt: 262-369                                                                         --- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------ Transcript
                 2vzd B 247 RDAFDTLFDHAPDKLNVVKKTLITFVNKHLNKLNLEVTELETQFADGVYLVLLMGLLEGYFVPLHSFFLTPDSFEQKVLNVSFAFELMQDGGLEKPKPRPEDIVNCDLKSTLRVLYNLFTKYRNVE 372
                                   256       266       276       286       296       306       316       326       336       346       356       366      

Chain C from PDB  Type:PROTEIN  Length:12
 aligned with PAXI_HUMAN | P49023 from UniProtKB/Swiss-Prot  Length:591

    Alignment length:12
                                    11  
           PAXI_HUMAN     2 DDLDALLADLES  13
               SCOP domains ------------ SCOP domains
               CATH domains ------------ CATH domains
               Pfam domains ------------ Pfam domains
         Sec.struct. author hhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------ SAPs(SNPs)
                    PROSITE ------------ PROSITE
           Transcript 1 (1) 1.1 -------- Transcript 1 (1)
           Transcript 1 (2) ---Exon 1.4b Transcript 1 (2)
                 2vzd C   2 DDLDALLADLES  13
                                    11  

Chain D from PDB  Type:PROTEIN  Length:14
 aligned with PAXI_HUMAN | P49023 from UniProtKB/Swiss-Prot  Length:591

    Alignment length:14
                                    10    
           PAXI_HUMAN     1 MDDLDALLADLEST  14
               SCOP domains -------------- SCOP domains
               CATH domains -------------- CATH domains
               Pfam domains -------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) -------------- SAPs(SNPs)
                    PROSITE -------------- PROSITE
           Transcript 1 (1) 1.1  --------- Transcript 1 (1)
           Transcript 1 (2) ----Exon 1.4b  Transcript 1 (2)
                 2vzd D   1 MDDLDALLADLEST  14
                                    10    

   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 2VZD)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 2VZD)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 2VZD)

(-) Gene Ontology  (45, 53)

Asymmetric Unit(hide GO term definitions)
Chain A,B   (PARVA_HUMAN | Q9NVD7)
molecular function
    GO:0003779    actin binding    Interacting selectively and non-covalently with monomeric or multimeric forms of actin, including actin filaments.
    GO:0005515    protein binding    Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
biological process
    GO:0031532    actin cytoskeleton reorganization    A process that is carried out at the cellular level which results in dynamic structural changes to the arrangement of constituent parts of cytoskeletal structures comprising actin filaments and their associated proteins.
    GO:0070252    actin-mediated cell contraction    The actin filament-based process in which cytoplasmic actin filaments slide past one another resulting in contraction of all or part of the cell body.
    GO:0001525    angiogenesis    Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels.
    GO:0007155    cell adhesion    The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules.
    GO:0030030    cell projection organization    A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a prolongation or process extending from a cell, e.g. a flagellum or axon.
    GO:0006935    chemotaxis    The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis).
    GO:0060271    cilium assembly    The assembly of a cilium, a specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole.
    GO:0007163    establishment or maintenance of cell polarity    Any cellular process that results in the specification, formation or maintenance of anisotropic intracellular organization or cell growth patterns.
    GO:0034113    heterotypic cell-cell adhesion    The attachment of a cell to a cell of a different type via adhesion molecules.
    GO:0003148    outflow tract septum morphogenesis    The process in which the anatomical structures of the outflow tract septum are generated and organized. The outflow tract septum is a partition in the outflow tract.
    GO:0008360    regulation of cell shape    Any process that modulates the surface configuration of a cell.
    GO:0071670    smooth muscle cell chemotaxis    The directed movement of a smooth muscle cell in response to an external stimulus.
    GO:0002040    sprouting angiogenesis    The extension of new blood vessels from existing capillaries into avascular tissues resulting from the proliferation of blood vessel endothelial cells.
    GO:0034446    substrate adhesion-dependent cell spreading    The morphogenetic process that results in flattening of a cell as a consequence of its adhesion to a substrate.
cellular component
    GO:0030018    Z disc    Platelike region of a muscle sarcomere to which the plus ends of actin filaments are attached.
    GO:0030054    cell junction    A cellular component that forms a specialized region of connection between two or more cells or between a cell and the extracellular matrix. At a cell junction, anchoring proteins extend through the plasma membrane to link cytoskeletal proteins in one cell to cytoskeletal proteins in neighboring cells or to proteins in the extracellular matrix.
    GO:0005737    cytoplasm    All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
    GO:0005856    cytoskeleton    Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles.
    GO:0005829    cytosol    The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
    GO:0005925    focal adhesion    Small region on the surface of a cell that anchors the cell to the extracellular matrix and that forms a point of termination of actin filaments.
    GO:0016020    membrane    A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
    GO:0005886    plasma membrane    The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.

Chain C,D   (PAXI_HUMAN | P49023)
molecular function
    GO:0008013    beta-catenin binding    Interacting selectively and non-covalently with the beta subunit of the catenin complex.
    GO:0005178    integrin binding    Interacting selectively and non-covalently with an integrin.
    GO:0046872    metal ion binding    Interacting selectively and non-covalently with any metal ion.
    GO:0005515    protein binding    Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
    GO:0032403    protein complex binding    Interacting selectively and non-covalently with any protein complex (a complex of two or more proteins that may include other nonprotein molecules).
    GO:0019901    protein kinase binding    Interacting selectively and non-covalently with a protein kinase, any enzyme that catalyzes the transfer of a phosphate group, usually from ATP, to a protein substrate.
    GO:0017166    vinculin binding    Interacting selectively and non-covalently with vinculin, a protein found in muscle, fibroblasts, and epithelial cells that binds actin and appears to mediate attachment of actin filaments to integral proteins of the plasma membrane.
    GO:0008270    zinc ion binding    Interacting selectively and non-covalently with zinc (Zn) ions.
biological process
    GO:0007155    cell adhesion    The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules.
    GO:0007160    cell-matrix adhesion    The binding of a cell to the extracellular matrix via adhesion molecules.
    GO:0034614    cellular response to reactive oxygen species    Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a reactive oxygen species stimulus. Reactive oxygen species include singlet oxygen, superoxide, and oxygen free radicals.
    GO:0007173    epidermal growth factor receptor signaling pathway    A series of molecular signals initiated by binding of a ligand to the tyrosine kinase receptor EGFR (ERBB1) on the surface of a cell. The pathway ends with regulation of a downstream cellular process, e.g. transcription.
    GO:0060396    growth hormone receptor signaling pathway    The series of molecular signals generated as a consequence of growth hormone receptor binding to its physiological ligand.
    GO:0006936    muscle contraction    A process in which force is generated within muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step that is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis.
    GO:0007172    signal complex assembly    The aggregation, arrangement and bonding together of a set of components to form a complex capable of relaying a signal within a cell.
    GO:0007165    signal transduction    The cellular process in which a signal is conveyed to trigger a change in the activity or state of a cell. Signal transduction begins with reception of a signal (e.g. a ligand binding to a receptor or receptor activation by a stimulus such as light), or for signal transduction in the absence of ligand, signal-withdrawal or the activity of a constitutively active receptor. Signal transduction ends with regulation of a downstream cellular process, e.g. regulation of transcription or regulation of a metabolic process. Signal transduction covers signaling from receptors located on the surface of the cell and signaling via molecules located within the cell. For signaling between cells, signal transduction is restricted to events at and within the receiving cell.
    GO:0007179    transforming growth factor beta receptor signaling pathway    A series of molecular signals initiated by the binding of an extracellular ligand to a transforming growth factor beta receptor on the surface of a target cell, and ending with regulation of a downstream cellular process, e.g. transcription.
    GO:0048010    vascular endothelial growth factor receptor signaling pathway    Any series of molecular signals initiated by the binding of an extracellular ligand to a vascular endothelial growth factor receptor (VEGFR) located on the surface of the receiving cell, and ending with regulation of a downstream cellular process, e.g. transcription.
cellular component
    GO:0005938    cell cortex    The region of a cell that lies just beneath the plasma membrane and often, but not always, contains a network of actin filaments and associated proteins.
    GO:0030054    cell junction    A cellular component that forms a specialized region of connection between two or more cells or between a cell and the extracellular matrix. At a cell junction, anchoring proteins extend through the plasma membrane to link cytoskeletal proteins in one cell to cytoskeletal proteins in neighboring cells or to proteins in the extracellular matrix.
    GO:0005737    cytoplasm    All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
    GO:0005856    cytoskeleton    Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles.
    GO:0005829    cytosol    The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
    GO:0005925    focal adhesion    Small region on the surface of a cell that anchors the cell to the extracellular matrix and that forms a point of termination of actin filaments.
    GO:0030027    lamellipodium    A thin sheetlike process extended by the leading edge of a migrating cell or extending cell process; contains a dense meshwork of actin filaments.
    GO:0005875    microtubule associated complex    Any multimeric complex connected to a microtubule.
    GO:0005654    nucleoplasm    That part of the nuclear content other than the chromosomes or the nucleolus.
    GO:0005886    plasma membrane    The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.
    GO:0001725    stress fiber    A contractile actin filament bundle that consists of short actin filaments with alternating polarity, cross-linked by alpha-actinin and possibly other actin bundling proteins, and with myosin present in a periodic distribution along the fiber.

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  2vzd
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        PARVA_HUMAN | Q9NVD72k2r 2vzc 2vzg 2vzi 3kmu 3kmw 3rep
        PAXI_HUMAN | P490231kky 1kl0 1ow6 1ow7 1ow8 2k2r 2o9v 2vzg 2vzi 3gm1 3py7 3rqe 3rqf 3rqg 3u3f 4edn 4r32 4xgz 4xh2 5uwh

(-) Related Entries Specified in the PDB File

1kky THEORETICAL MODEL OF THE FAT DOMAIN OF FOCAL ADHESIONKINASE COMPLEXED WITH PAXILLIN LD2 MOTIF
1kl0 THEORETICAL MODEL OF THE FAT DOMAIN OF FOCAL ADHESIONKINASE COMPLEXED WITH PAXILLIN LD2 MOTIF
2vzc CRYSTAL STRUCTURE OF THE C-TERMINAL CALPONIN HOMOLOGY DOMAIN OF ALPHA PARVIN
2vzg CRYSTAL STRUCTURE OF THE C-TERMINAL CALPONIN HOMOLOGY DOMAIN OF ALPHA-PARVIN IN COMPLEX WITH PAXILLIN LD2 MOTIF
2vzi CRYSTAL STRUCTURE OF THE C-TERMINAL CALPONIN HOMOLOGY DOMAIN OF ALPHA-PARVIN IN COMPLEX WITH PAXILLIN LD4 MOTIF