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(-) Description

Title :  PYK2-FAT DOMAIN IN COMPLEX WITH LEUPAXIN LD4 MOTIF
 
Authors :  D. J. Miller
Date :  24 Dec 14  (Deposition) - 30 Dec 15  (Release) - 16 Mar 16  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.79
Chains :  Asym./Biol. Unit :  A,C
Keywords :  4-Helix Bundle, Focal Adhesion, Tyrosine Kinase, Leupaxin, Cell Adhesion (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  M. S. Vanarotti, D. B. Finkelstein, C. D. Guibao, A. Nourse, D. J. Miller, J. J. Zheng
Structural Basis For The Interaction Between Pyk2-Fat Domai And Leupaxin Ld Repeats.
Biochemistry V. 55 1332 2016
PubMed-ID: 26866573  |  Reference-DOI: 10.1021/ACS.BIOCHEM.5B01274

(-) Compounds

Molecule 1 - PROTEIN-TYROSINE KINASE 2-BETA
    Chains: A
    EC Number: 2.7.10.2
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Fragment: FAT DOMAIN (UNP RESIDUES 871-1005)
    Gene: PTK2B, FAK2, PYK2, RAFTK
    Mutation: YES
    Organism Common: HUMAN
    Organism Scientific: HOMO SAPIENS
    Organism Taxid: 9606
    Synonym: CALCIUM-DEPENDENT TYROSINE KINASE,CADTK,CALCIUM-REGULATED NON-RECEPTOR PROLINE-RICH TYROSINE KINASE,CELL ADHESION KINASE BETA, CAKB,FOCAL ADHESION KINASE 2,FADK 2,PROLINE-RICH TYROSINE KINASE 2, RELATED ADHESION FOCAL TYROSINE KINASE,RAFTK
 
Molecule 2 - 19-MER PEPTIDE CONTAINING LEUPAXIN LD4 MOTIF
    Chains: C
    Engineered: YES
    Organism Common: HUMAN
    Organism Scientific: HOMO SAPIENS
    Organism Taxid: 9606
    Synthetic: YES

 Structural Features

(-) Chains, Units

  12
Asymmetric/Biological Unit : AC

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

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(-) Sites  (0, 0)

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(-) SS Bonds  (0, 0)

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(-) Cis Peptide Bonds  (0, 0)

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 Sequence-Structure Mapping

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(-) PROSITE Motifs  (0, 0)

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(-) Exons   (0, 0)

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(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
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Chain A from PDB  Type:PROTEIN  Length:137
                                                                                                                                                                          
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .........hhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------- Transcript
                4xek A  869 HMANLDRTDDLVYLNVMELVRAVLELKNELSQLPPEGYVVVVKNVGLTLRKLIGSVDDLLPSLPSSSRTEIEGTQKLLNKDLAELINKMRLAQQNAVTSLSEEAKRQMLTASHTLAVDAKNLLDAVDQAKVLANLAH 1005
                                   878       888       898       908       918       928       938       948       958       968       978       988       998       


Chain C from PDB  Type:PROTEIN  Length:16
                                                 
               SCOP domains ---------------- SCOP domains
               CATH domains ---------------- CATH domains
               Pfam domains ---------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ---------------- SAPs(SNPs)
                    PROSITE ---------------- PROSITE
                 Transcript ---------------- Transcript
                4xek C   86 KTSAAAQLDELMAHLT  101
                                    95
   Legend:   → Mismatch (orange background)
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    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4XEK)

(-) CATH Domains  (0, 0)

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(-) Pfam Domains  (0, 0)

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(-) Gene Ontology  (153, 165)

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        FAK2_HUMAN | Q14289: 2fo6 2lk4 3cc6 3et7 3fzo 3fzp 3fzr 3fzs 3fzt 3gm1 3gm2 3gm3 3h3c 3u3f 4eku 4h1j 4h1m 4r32 4xef 4xev 5to8
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(-) Related Entries Specified in the PDB File

4xef 4xev