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Title :   CRYSTAL STRUCTURE OF FRAC WITH POC BOUND (CRYSTAL FORM I)

Authors :   J. M. M. Caaveiro, K. Tanaka, K. Tsumoto

Date :   19 Jun 14 (Deposition) - 04 Mar 15 (Release) - 03 Aug 16 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   1.60

Chains :   Asym. Unit : A,B
Biol. Unit 1: A  (1x)
Biol. Unit 2: B  (1x)

Keywords :   Toxin, Actinoporin, Pore-Forming Toxin, Membrane Lipids, Phosphocholine, Lipid-Protein Interaction (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   K. Tanaka, J. M. M. Caaveiro, K. Morante, J. M. Gonzalez-Manas, K. Tsumoto
Structural Basis For Self-Assembly Of A Cytolytic Pore Line By Protein And Lipid
Nat Commun V. 6 6337 2015
PubMed-ID: 25716479 | Reference-DOI: 10.1038/NCOMMS7337
(for further references see the PDB file header)

Molecule 1 - FRAGACEATOXIN C
	Chains	:	A, B
	Engineered	:	YES
	Expression System	:	ESCHERICHIA COLI BL21(DE3)
	Expression System Plasmid	:	PGEM-T
	Expression System Taxid	:	469008
	Expression System Vector Type	:	PLASMID
	Organism Common	:	STRAWBERRY ANEMONE
	Organism Scientific	:	ACTINIA FRAGACEA
	Organism Taxid	:	396334
	Synonym	:	FRAC

		1	2
Asymmetric Unit	:	A	B
Biological Unit 1 (1x)	:	A
Biological Unit 2 (1x)	:		B

Summary Information (see also Sequences/Alignments below)

Asymmetric Unit (5, 18)

No.	Name	Count	Type	Full Name
1	ACT	1	Ligand/Ion	ACETATE ION
2	FMT	10	Ligand/Ion	FORMIC ACID
3	GOL	1	Ligand/Ion	GLYCEROL
4	PC	4	Ligand/Ion	PHOSPHOCHOLINE
5	SO4	2	Ligand/Ion	SULFATE ION

Biological Unit 1 (3, 7)

No.	Name	Count	Type	Full Name
1	ACT	1	Ligand/Ion	ACETATE ION
2	FMT	5	Ligand/Ion	FORMIC ACID
3	GOL	1	Ligand/Ion	GLYCEROL
4	PC	-1	Ligand/Ion	PHOSPHOCHOLINE
5	SO4	-1	Ligand/Ion	SULFATE ION

Biological Unit 2 (2, 7)

No.	Name	Count	Type	Full Name
1	ACT	-1	Ligand/Ion	ACETATE ION
2	FMT	5	Ligand/Ion	FORMIC ACID
3	GOL	-1	Ligand/Ion	GLYCEROL
4	PC	-1	Ligand/Ion	PHOSPHOCHOLINE
5	SO4	2	Ligand/Ion	SULFATE ION

Asymmetric Unit (18, 18)

No.	Name	Evidence	Residues	Description
01	AC1	SOFTWARE	ARG A:53 , SER A:54 , GLY A:85 , SER A:105 , PRO A:107 , TYR A:108 , TYR A:113 , TYR A:133 , TYR A:137 , TYR A:138 , FMT A:203 , HOH A:310 , HOH A:360 , TYR B:138 , SO4 B:203	binding site for residue PC A 201
02	AC2	SOFTWARE	TRP A:112 , TYR A:113 , SER A:114 , TRP A:116 , TYR A:137 , PRO A:142 , FMT A:206 , HOH A:301 , HOH A:306 , HOH A:314 , HOH A:367 , TRP B:112 , TYR B:113 , HOH B:317	binding site for residue PC A 202
03	AC3	SOFTWARE	ARG A:53 , SER A:54 , PC A:201 , GLU B:134 , TYR B:138	binding site for residue FMT A 203
04	AC4	SOFTWARE	HIS A:63 , LYS A:64 , HOH A:353 , ARG B:161	binding site for residue FMT A 204
05	AC5	SOFTWARE	LEU A:23 , LYS A:32 , HIS A:169 , HOH A:313	binding site for residue FMT A 205
06	AC6	SOFTWARE	TYR A:113 , SER A:114 , TRP A:116 , TYR A:137 , PC A:202 , HOH A:367 , TYR B:113	binding site for residue FMT A 206
07	AC7	SOFTWARE	ARG A:120 , TYR A:122 , LYS A:123 , HOH A:403 , HOH A:405	binding site for residue FMT A 207
08	AC8	SOFTWARE	ALA A:2 , ASP A:3 , VAL A:18 , HOH A:302 , HOH A:318 , HOH A:425 , ASP B:58	binding site for residue GOL A 208
09	AC9	SOFTWARE	ASN A:147 , ASN A:165 , SER A:166 , SER A:167 , HOH A:423	binding site for residue ACT A 209
10	AD1	SOFTWARE	TYR A:138 , ARG B:53 , SER B:54 , GLY B:85 , SER B:105 , PRO B:107 , TYR B:108 , TYR B:113 , TYR B:133 , TYR B:137 , TYR B:138 , FMT B:206 , HOH B:309 , HOH B:374	binding site for residue PC B 201
11	AD2	SOFTWARE	TRP A:112 , TYR A:113 , TRP B:116 , TYR B:137 , TYR B:138 , PRO B:142 , HOH B:301 , HOH B:440 , HOH B:455	binding site for residue PC B 202
12	AD3	SOFTWARE	ARG A:53 , GLN A:130 , TYR A:133 , TYR A:138 , PC A:201 , ARG B:53 , GLN B:130 , TYR B:133 , TYR B:138	binding site for residue SO4 B 203
13	AD4	SOFTWARE	VAL B:29 , LYS B:30 , LYS B:77 , ARG B:79 , GLY B:80 , HOH B:473	binding site for residue SO4 B 204
14	AD5	SOFTWARE	TRP A:112 , TYR A:113 , TYR B:113 , SER B:114 , TRP B:116 , TYR B:137	binding site for residue FMT B 205
15	AD6	SOFTWARE	TYR A:138 , HIS A:139 , ARG B:53 , THR B:84 , PC B:201	binding site for residue FMT B 206
16	AD7	SOFTWARE	HIS A:63 , HIS B:150 , SER B:151 , HOH B:373	binding site for residue FMT B 207
17	AD8	SOFTWARE	ARG A:79 , ASN B:28 , LYS B:30 , HIS B:169 , HOH B:472	binding site for residue FMT B 208
18	AD9	SOFTWARE	ARG B:120 , TYR B:122 , LYS B:123 , HOH B:417 , HOH B:484	binding site for residue FMT B 209

(no "SS Bond" information available for 4TSL)

(no "Cis Peptide Bond" information available for 4TSL)

(no "SAP(SNP)/Variant" information available for 4TSL)

(no "PROSITE Motif" information available for 4TSL)

(no "Exon" information available for 4TSL)

Asymmetric Unit

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	UniProt sequence: complete aligned part

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Chain A from PDB  Type:PROTEIN  Length:178
                                                                                                                                                                                                                  
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ......eee.hhhhhhhhhhhhhhh.....eeeeeeeee....eeeeeeeeee.........ee...eeeeeeee.........eeeeeeeee....eeeeeeee.........eeeeeee......hhhhhhhhhhh...ee...eeeeeeee..eeeeeee....eeeeeeeeee. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4tsl A   2 ADVAGAVIDGAGLGFDVLKTVLEALGNVKRKIAVGIDNESGKTWTAMNTYFRSGTSDIVLPHKVAHGKALLYNGQKNRGPVATGVVGVIAYSMSDGNTLAVLFSVPYDYNWYSNWWNVRVYKGQKRADQRMYEELYYHRSPFRGDNGWHSRGLGYGLKSRGFMNSSGHAILEIHVTKA 179
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171

Chain B from PDB  Type:PROTEIN  Length:178
                                                                                                                                                                                                                  
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ......eee......hhhhhhhhhh.....eeeeeeeee....eeeeeeeeee.........ee...eeeeeeee.........eeeeeeeee....eeeeeeee.........eeeeeee......hhhhhhhhhhh...ee...eeeeeeee..eeeeeee....eeeeeeeeee. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4tsl B   2 ADVAGAVIDGAGLGFDVLKTVLEALGNVKRKIAVGIDNESGKTWTAMNTYFRSGTSDIVLPHKVAHGKALLYNGQKNRGPVATGVVGVIAYSMSDGNTLAVLFSVPYDYNWYSNWWNVRVYKGQKRADQRMYEELYYHRSPFRGDNGWHSRGLGYGLKSRGFMNSSGHAILEIHVTKA 179
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171

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(no "SCOP Domain" information available for 4TSL)

(no "CATH Domain" information available for 4TSL)

(no "Pfam Domain" information available for 4TSL)

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	ACTPC_ACTFR \| B9W5G6	:	3lim 3vwi 3w9p 3zwg 3zwj 4tsn 4tso 4tsp 4tsq 4tsy 4wdc 5bpg 5gwf

3vwi	3VWI IS THE SAME PROTEIN IN THE WATER-SOLUBLE STATE (CRYSTAL FORM I)
3w9p	3VWI IS THE SAME PROTEIN IN THE WATER-SOLUBLE STATE (CRYSTAL FORM II)
4tsn
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4tsy

Description

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Ligands, Modified Residues, Ions (5, 18)

Sites (18, 18)

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