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(-) Description

Title :  CRYSTAL STRUCTURE OF THE LIGHT AND HVEM COMPLEX
 
Authors :  W. Liu, U. A. Ramagoal, D. Himmel, J. B. Bonanno, S. G. Nathenson, S. C. Al To-Animals: The Immune Function Network (Ifn), New York Stru Genomics Research Consortium (Nysgrc)
Date :  11 Nov 14  (Deposition) - 04 Feb 15  (Release) - 11 Feb 15  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.30
Chains :  Asym. Unit :  A,B,C,D,E,F,G,H,I,J,K,L
Biol. Unit 1:  A,B,C,D,E,F,G,H,I,J,K,L  (1x)
Biol. Unit 2:  A,B,C,D,E,F  (1x)
Biol. Unit 3:  G,H,I,J,K,L  (1x)
Keywords :  Structural Genomics, Psi-Biology, New York Structural Genomics, Research Consortium, Nysgrc, Immunity, N-Glycosylation, Membrane, Secreted Protein, Cytokine, Ifn, Jelly-Roll Fold, Protein Structure Initiative, Atoms-To-Animals: The Immune Function Network, Cysteine Rich Domain, Signaling, Cell Membrane, Secreted, Immune System (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  W. Liu, U. A. Ramagoal, D. Himmel, J. B. Bonanno, S. G. Nathenson, S. C. Almo
Crystal Structure Of The Light And Hvem Complex
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - TUMOR NECROSIS FACTOR LIGAND SUPERFAMILY MEMBER 14, SOLUBLE FORM
    Chains: A, B, C, G, H, I
    Engineered: YES
    Expression System: DROSOPHILA
    Expression System Common: FRUIT FLIES
    Expression System Plasmid: PMT/BIP/HIS/V5
    Expression System Strain: S2
    Expression System Taxid: 7215
    Expression System Vector Type: PLASMID
    Fragment: EXTRACELLULAR DOMAIN, RESIDUES 83-240
    Gene: TNFSF14, HVEML, LIGHT, UNQ391/PRO726
    Organism Common: HUMAN
    Organism Scientific: HOMO SAPIENS
    Organism Taxid: 9606
    Synonym: HERPES VIRUS ENTRY MEDIATOR LIGAND, HVEM-L, HERPESVIRUS ENTRY MEDIATOR LIGAND, TUMOR NECROSIS FACTOR LIGAND SUPERFAMILY MEMBER 14
 
Molecule 2 - TUMOR NECROSIS FACTOR RECEPTOR SUPERFAMILY MEMBER 14
    Chains: D, E, F, J, K, L
    Engineered: YES
    Expression System: DROSOPHILA
    Expression System Common: FRUIT FLIES
    Expression System Plasmid: PMT/BIP/HIS/V5
    Expression System Strain: S2
    Expression System Taxid: 7215
    Expression System Vector Type: PLASMID
    Fragment: TNFR-CYS 1-3 REPEATS, RESIDUES 39-162
    Gene: TNFRSF14, HVEA, HVEM, UNQ329/PRO509
    Organism Common: HUMAN
    Organism Scientific: HOMO SAPIENS
    Organism Taxid: 9606
    Synonym: HERPES VIRUS ENTRY MEDIATOR A, HERPESVIRUS ENTRY MEDIATOR A, HVEA, TUMOR NECROSIS FACTOR RECEPTOR-LIKE 2, TR2

 Structural Features

(-) Chains, Units

  123456789101112
Asymmetric Unit : ABCDEFGHIJKL
Biological Unit 1 (1x): ABCDEFGHIJKL
Biological Unit 2 (1x): ABCDEF      
Biological Unit 3 (1x):       GHIJKL

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (3, 27)

Asymmetric Unit (3, 27)
No.NameCountTypeFull Name
1CL14Ligand/IonCHLORIDE ION
2GOL8Ligand/IonGLYCEROL
3NAG5Ligand/IonN-ACETYL-D-GLUCOSAMINE
Biological Unit 1 (2, 13)
No.NameCountTypeFull Name
1CL-1Ligand/IonCHLORIDE ION
2GOL8Ligand/IonGLYCEROL
3NAG5Ligand/IonN-ACETYL-D-GLUCOSAMINE
Biological Unit 2 (2, 6)
No.NameCountTypeFull Name
1CL-1Ligand/IonCHLORIDE ION
2GOL4Ligand/IonGLYCEROL
3NAG2Ligand/IonN-ACETYL-D-GLUCOSAMINE
Biological Unit 3 (2, 7)
No.NameCountTypeFull Name
1CL-1Ligand/IonCHLORIDE ION
2GOL4Ligand/IonGLYCEROL
3NAG3Ligand/IonN-ACETYL-D-GLUCOSAMINE

(-) Sites  (27, 27)

Asymmetric Unit (27, 27)
No.NameEvidenceResiduesDescription
01AC1SOFTWAREARG A:228 , ASP A:229 , GLY A:230 , ARG A:232 , SER A:233BINDING SITE FOR RESIDUE CL A 301
02AC2SOFTWAREARG A:172 , LEU D:90 , SER D:91BINDING SITE FOR RESIDUE CL A 302
03AC3SOFTWAREARG B:228 , ASP B:229 , GLY B:230 , ARG B:232 , SER B:233BINDING SITE FOR RESIDUE CL B 301
04AC4SOFTWAREGLY B:119 , ARG D:62 , CYS D:93BINDING SITE FOR RESIDUE CL B 302
05AC5SOFTWAREGLU B:178 , HOH B:410 , THR C:231 , GLN E:95 , HOH E:401BINDING SITE FOR RESIDUE GOL B 303
06AC6SOFTWAREARG C:228 , ASP C:229 , GLY C:230 , ARG C:232 , SER C:233BINDING SITE FOR RESIDUE CL C 301
07AC7SOFTWARESER A:200 , SER A:201 , PHE A:202 , SER B:200 , SER B:201 , PHE B:202 , SER C:200 , SER C:201 , PHE C:202BINDING SITE FOR RESIDUE GOL C 302
08AC8SOFTWAREARG C:172 , SER F:91 , HOH F:308BINDING SITE FOR RESIDUE CL C 303
09AC9SOFTWAREGLU A:178 , ASP B:229 , GLN D:95 , HOH D:305 , HOH D:306 , HOH D:311 , HOH D:313BINDING SITE FOR RESIDUE GOL D 201
10BC1SOFTWARESER D:108 , ASN D:110BINDING SITE FOR RESIDUE NAG D 202
11BC2SOFTWAREARG B:172 , LEU E:90 , SER E:91BINDING SITE FOR RESIDUE CL E 201
12BC3SOFTWAREASN E:110BINDING SITE FOR RESIDUE NAG E 202
13BC4SOFTWARELEU A:120 , GLU C:178 , LEU F:94 , GLN F:95 , HOH F:302 , HOH F:303BINDING SITE FOR RESIDUE GOL F 201
14BC5SOFTWAREARG G:228 , ASP G:229 , GLY G:230 , ARG G:232 , SER G:233BINDING SITE FOR RESIDUE CL G 301
15BC6SOFTWAREARG G:172 , LEU J:90 , SER J:91BINDING SITE FOR RESIDUE CL G 302
16BC7SOFTWARELEU G:177 , GLU G:178 , HOH G:436 , HOH G:446 , LEU H:120 , GLN J:95 , HOH J:307 , HOH J:308BINDING SITE FOR RESIDUE GOL G 303
17BC8SOFTWAREGLY G:119 , CYS L:93BINDING SITE FOR RESIDUE CL G 304
18BC9SOFTWAREARG H:228 , ASP H:229 , GLY H:230 , THR H:231 , ARG H:232 , SER H:233 , HOH H:404BINDING SITE FOR RESIDUE CL H 301
19CC1SOFTWARELEU H:177 , GLU H:178 , LEU I:120 , GLN K:95BINDING SITE FOR RESIDUE GOL H 302
20CC2SOFTWAREARG I:228 , ASP I:229 , GLY I:230 , THR I:231 , ARG I:232 , SER I:233BINDING SITE FOR RESIDUE CL I 301
21CC3SOFTWARESER G:200 , PHE G:202 , SER H:200 , SER H:201 , PHE H:202 , SER I:200 , SER I:201 , PHE I:202BINDING SITE FOR RESIDUE GOL I 302
22CC4SOFTWAREHOH G:447 , LEU I:177 , GLU I:178 , HOH I:405 , HOH I:412 , LEU L:94 , GLN L:95 , HOH L:306BINDING SITE FOR RESIDUE GOL I 303
23CC5SOFTWAREASN J:110BINDING SITE FOR RESIDUE NAG J 201
24CC6SOFTWAREGLY I:119 , ARG K:62 , CYS K:93BINDING SITE FOR RESIDUE CL K 201
25CC7SOFTWAREALA K:107 , SER K:108 , ASN K:110BINDING SITE FOR RESIDUE NAG K 202
26CC8SOFTWAREHOH I:406 , SER L:91BINDING SITE FOR RESIDUE CL L 201
27CC9SOFTWAREALA L:107 , SER L:108 , ASN L:110BINDING SITE FOR RESIDUE NAG L 202

(-) SS Bonds  (54, 54)

Asymmetric Unit
No.Residues
1A:187 -A:154
2B:187 -B:154
3C:187 -C:154
4D:53 -D:42
5D:67 -D:54
6D:75 -D:57
7D:93 -D:78
8D:111 -D:96
9D:119 -D:99
10D:135 -D:127
11D:138 -D:121
12E:53 -E:42
13E:67 -E:54
14E:75 -E:57
15E:93 -E:78
16E:111 -E:96
17E:119 -E:99
18E:135 -E:127
19E:138 -E:121
20F:53 -F:42
21F:67 -F:54
22F:75 -F:57
23F:93 -F:78
24F:111 -F:96
25F:119 -F:99
26F:135 -F:127
27F:138 -F:121
28G:187 -G:154
29H:187 -H:154
30I:187 -I:154
31J:53 -J:42
32J:67 -J:54
33J:75 -J:57
34J:93 -J:78
35J:111 -J:96
36J:119 -J:99
37J:135 -J:127
38J:138 -J:121
39K:53 -K:42
40K:67 -K:54
41K:75 -K:57
42K:93 -K:78
43K:111 -K:96
44K:119 -K:99
45K:135 -K:127
46K:138 -K:121
47L:53 -L:42
48L:67 -L:54
49L:75 -L:57
50L:93 -L:78
51L:111 -L:96
52L:119 -L:99
53L:135 -L:127
54L:138 -L:121

(-) Cis Peptide Bonds  (4, 4)

Asymmetric Unit
No.Residues
1Leu B:220 -Asp B:221
2Leu C:220 -Asp C:221
3Leu H:220 -Asp H:221
4Leu I:220 -Asp I:221

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4RSU)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4RSU)

(-) Exons   (0, 0)

(no "Exon" information available for 4RSU)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:149
                                                                                                                                                                                     
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeeee......................eee.eeee..eeee...eeeeeeeeeeeeee.........eeeeeeee.......eeeeeeee...........eeeeeeeeeeeeee....eeeeee.hhhhh........eeeeee. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4rsu A  92 VNPAAHLTGANSSLTGSGGPLLWETQLGLAFLRGLSYHDGALVVTKAGYYYIYSKVQLGGVGCPLGLASTITHGLYKRTPRYPEELELLVSQQSPCGRATSSSRVWWDSSFLGGVVHLEAGEEVVVRVLDERLVRLRDGTRSYFGAFMV 240
                                   101       111       121       131       141       151       161       171       181       191       201       211       221       231         


Chain B from PDB  Type:PROTEIN  Length:142
                                                                                                                                                                              
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....eeeee......................eee.eeee..eeee...eeeeeeeeeeeeee....eeeeeeee.......eeeeeeee........eeeeeeeeeeeeee....eeeeeeehhhhh........eeeeee. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4rsu B  91 EVNPAAHLTGANSSLTGSGGPLLWETQLGLAFLRGLSYHDGALVVTKAGYYYIYSKVQLGGVGCSTITHGLYKRTPRYPEELELLVSQQSPCTSSSRVWWDSSFLGGVVHLEAGEEVVVRVLDERLVRLRDGTRSYFGAFMV 240
                                   100       110       120       130       140       150   ||  165       175       185 ||    198       208       218       228       238  
                                                                                         154|                        187|                                                 
                                                                                          160                         191                                                 


Chain C from PDB  Type:PROTEIN  Length:138
                                                                                                                                                                          
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ...eeeee......................eee..eee..eee....eeeeeeeeeeeeee...eeeeeeee.......eeeeeeee......eeeeeeeeeeeeee....eeeeeeehhhhh........eeeeee. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 4rsu C  92 VNPAAHLTGANSSLTGSGGPLLWETQLGLAFLRGLSYHDGALVVTKAGYYYIYSKVQLGGVGCTITHGLYKRTPRYPEELELLVSQQSPCSSRVWWDSSFLGGVVHLEAGEEVVVRVLDERLVRLRDGTRSYFGAFMV 240
                                   101       111       121       131       141       151  ||   167       177       187|      202       212       222       232        
                                                                                        154|                       187|                                               
                                                                                         161                        193                                               


Chain D from PDB  Type:PROTEIN  Length:105
                                                                                                                                         
               SCOP domains --------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ........eeee..eeee.....eeeee........eeee....ee..........ee....hhhh.eeeee........eeee...eeeeeee..eeeeeee.. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------- Transcript
                 4rsu D  38 SLPSCKEDEYPVGSECCPKCSPGYRVKEACGELTGTVCEPCPPGTYIAHLNGLSKCLQCQMCDPAMGLRASRNCSRTENAVCGCSPGHFCIVQDGDHCAACRAYA 142
                                    47        57        67        77        87        97       107       117       127       137     


Chain E from PDB  Type:PROTEIN  Length:101
                                                                                                                                     
               SCOP domains ----------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .........eeee..eeee.....eeeee........eeee....ee..........ee....hhhh.eeeee........eeee...eee......eee. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------- Transcript
                 4rsu E  37 RSLPSCKEDEYPVGSECCPKCSPGYRVKEACGELTGTVCEPCPPGTYIAHLNGLSKCLQCQMCDPAMGLRASRNCSRTENAVCGCSPGHFCIVHCAACRAY 141
                                    46        56        66        76        86        96       106       116       126  ||   140 
                                                                                                                      129|       
                                                                                                                       134       


Chain F from PDB  Type:PROTEIN  Length:98
                                                                                                                                  
               SCOP domains -------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ........eeee..eeee.....eeeee........eeee....ee..........ee....hhhh.eeeee........eeee....ee.....ee. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------- Transcript
                 4rsu F  38 SLPSCKEDEYPVGSECCPKCSPGYRVKEACGELTGTVCEPCPPGTYIAHLNGLSKCLQCQMCDPAMGLRASRNCSRTENAVCGCSPGHFCIVCAACRA 140
                                    47        57        67        77        87        97       107       117       127 ||     
                                                                                                                     129|     
                                                                                                                      135     


Chain G from PDB  Type:PROTEIN  Length:150
                                                                                                                                                                                      
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ....eeeee......................eee.eeee..eeee...eeeeeeeeeeeeee.........eeeeeeee.......eeeeeeee...........eeeeeeeeeeeeee....eeeeee.hhhhh........eeeeee. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 4rsu G  91 EVNPAAHLTGANSSLTGSGGPLLWETQLGLAFLRGLSYHDGALVVTKAGYYYIYSKVQLGGVGCPLGLASTITHGLYKRTPRYPEELELLVSQQSPCGRATSSSRVWWDSSFLGGVVHLEAGEEVVVRVLDERLVRLRDGTRSYFGAFMV 240
                                   100       110       120       130       140       150       160       170       180       190       200       210       220       230       240


Chain H from PDB  Type:PROTEIN  Length:150
                                                                                                                                                                                      
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ....eeeee......................eee.eeee..eeee...eeeeeeeeeeeeee...hhhhh.eeeeeeee.......eeeeeeee...........eeeeeeeeeeeeee....eeeeeeehhhhh........eeeeee. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 4rsu H  91 EVNPAAHLTGANSSLTGSGGPLLWETQLGLAFLRGLSYHDGALVVTKAGYYYIYSKVQLGGVGCPLGLASTITHGLYKRTPRYPEELELLVSQQSPCGRATSSSRVWWDSSFLGGVVHLEAGEEVVVRVLDERLVRLRDGTRSYFGAFMV 240
                                   100       110       120       130       140       150       160       170       180       190       200       210       220       230       240


Chain I from PDB  Type:PROTEIN  Length:147
                                                                                                                                                                                   
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeeeee.............ee......eee..eee..eee....eeeeeeeeeeeeee.......eeeeeeee.......eeeeeeee...........eeeeeeeeeeeeee....eeeeeeehhhhh........eeeeeee Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4rsu I  92 VNPAAHLTGANSSLTGSGGPLLWETQLGLAFLRGLSYHDGALVVTKAGYYYIYSKVQLGGVGCPLASTITHGLYKRTPRYPEELELLVSQQSPCGRATSSSRVWWDSSFLGGVVHLEAGEEVVVRVLDERLVRLRDGTRSYFGAFMV 240
                                   101       111       121       131       141       151   ||  163       173       183       193       203       213       223       233       
                                                                                         155|                                                                                  
                                                                                          158                                                                                  


Chain J from PDB  Type:PROTEIN  Length:106
                                                                                                                                          
               SCOP domains ---------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .........eeee..eeee.....eeeee........eeee....ee..........ee....hhhh.eeeee........eeee...eeeeeee..eeeeeee.. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------- Transcript
                 4rsu J  37 RSLPSCKEDEYPVGSECCPKCSPGYRVKEACGELTGTVCEPCPPGTYIAHLNGLSKCLQCQMCDPAMGLRASRNCSRTENAVCGCSPGHFCIVQDGDHCAACRAYA 142
                                    46        56        66        76        86        96       106       116       126       136      


Chain K from PDB  Type:PROTEIN  Length:106
                                                                                                                                          
               SCOP domains ---------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .........eeee..eeee.....eeeee........eeee....ee..........ee....hhhh.eeeee........eeee...eeeeee....eeeeee.. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------- Transcript
                 4rsu K  37 RSLPSCKEDEYPVGSECCPKCSPGYRVKEACGELTGTVCEPCPPGTYIAHLNGLSKCLQCQMCDPAMGLRASRNCSRTENAVCGCSPGHFCIVQDGDHCAACRAYA 142
                                    46        56        66        76        86        96       106       116       126       136      


Chain L from PDB  Type:PROTEIN  Length:104
                                                                                                                                        
               SCOP domains -------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....eeee..eeee.....eeeee........eeee....ee..........ee....hhhh.eeeee........eeee...eeeeeee..eeeeeee.... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------- Transcript
                 4rsu L  41 SCKEDEYPVGSECCPKCSPGYRVKEACGELTGTVCEPCPPGTYIAHLNGLSKCLQCQMCDPAMGLRASRNCSRTENAVCGCSPGHFCIVQDGDHCAACRAYATS 144
                                    50        60        70        80        90       100       110       120       130       140
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4RSU)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4RSU)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4RSU)

(-) Gene Ontology  (46, 53)

Asymmetric Unit(hide GO term definitions)

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Asymmetric Unit
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

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        TNF14_HUMAN | O43557: 4en0 4j6g 4kg8 4kgg 4kgq
        TNR14_HUMAN | Q92956: 1jma 2aw2 4fhq

(-) Related Entries Specified in the PDB File

2aw2 RELATED ID: NYSGRC-011104 RELATED DB: TARGETTRACK RELATED ID: NYSGRC-011086 RELATED DB: TARGETTRACK
4fhq
4j6g