Title | | CRYSTAL STRUCTURE OF THE LIGHT AND HVEM COMPLEX |
Keywords | | STRUCTURAL GENOMICS, PSI-BIOLOGY, NEW YORK STRUCTURAL GENOMI RESEARCH CONSORTIUM, NYSGRC, IMMUNITY, N-GLYCOSYLATION, MEM SECRETED PROTEIN, CYTOKINE, IFN, JELLY-ROLL FOLD, PROTEIN S INITIATIVE, ATOMS-TO-ANIMALS: THE IMMUNE FUNCTION NETWORK, RICH DOMAIN, SIGNALING, CELL MEMBRANE, SECRETED, IMMUNE SYS YORK STRUCTURAL GENOMICS RESEARCH CONSORTIUM |
Experiment | | X-ray diffraction |
Number of Models | | 1 |
Asymmetric unit from PDB Unit | Type | Name | Chain ID | Residues | Atoms | Hetatoms |
1 | Protein | TUMOR NECROSIS FACTOR LIGAND SUPERFAMILY MEMBER 1 FORM | A | 149 | 1140 | 0 |
2 | Protein | TUMOR NECROSIS FACTOR LIGAND SUPERFAMILY MEMBER 1 FORM | B | 142 | 1093 | 0 |
3 | Protein | TUMOR NECROSIS FACTOR LIGAND SUPERFAMILY MEMBER 1 FORM | C | 138 | 1069 | 0 |
4 | Protein | | D | 105 | 761 | 0 |
5 | Protein | | E | 101 | 732 | 0 |
6 | Protein | | F | 98 | 705 | 0 |
7 | Protein | TUMOR NECROSIS FACTOR LIGAND SUPERFAMILY MEMBER 1 FORM | G | 150 | 1149 | 0 |
8 | Protein | TUMOR NECROSIS FACTOR LIGAND SUPERFAMILY MEMBER 1 FORM | H | 150 | 1149 | 0 |
9 | Protein | TUMOR NECROSIS FACTOR LIGAND SUPERFAMILY MEMBER 1 FORM | I | 147 | 1125 | 0 |
10 | Protein | | J | 106 | 766 | 0 |
11 | Protein | | K | 106 | 768 | 0 |
12 | Protein | | L | 104 | 741 | 0 |
13 | Ligand | TUMOR NECROSIS FACTOR LIGAND SUPERFAMILY MEMBER 1 FORM | A | 2 | 0 | 2 |
14 | Ligand | TUMOR NECROSIS FACTOR LIGAND SUPERFAMILY MEMBER 1 FORM | B | 3 | 0 | 8 |
15 | Ligand | TUMOR NECROSIS FACTOR LIGAND SUPERFAMILY MEMBER 1 FORM | C | 3 | 0 | 8 |
16 | Ligand | | D | 2 | 0 | 20 |
17 | Ligand | | E | 2 | 0 | 15 |
18 | Ligand | | F | 1 | 0 | 6 |
19 | Ligand | TUMOR NECROSIS FACTOR LIGAND SUPERFAMILY MEMBER 1 FORM | G | 4 | 0 | 9 |
20 | Ligand | TUMOR NECROSIS FACTOR LIGAND SUPERFAMILY MEMBER 1 FORM | H | 2 | 0 | 7 |
21 | Ligand | TUMOR NECROSIS FACTOR LIGAND SUPERFAMILY MEMBER 1 FORM | I | 3 | 0 | 13 |
22 | Ligand | | J | 1 | 0 | 14 |
23 | Ligand | | K | 2 | 0 | 15 |
24 | Ligand | | L | 2 | 0 | 15 |
25 | Water | | | 223 | 0 | 223 |
total | | | | 1746 | 11198 | 355 |
Unit 1 | VAL92 ASN93 PRO94 ALA95 ALA96 HIS97 LEU98 THR99 GLY100 ALA101 ASN102 SER103 SER104 LEU105 THR106 GLY107 SER108 GLY109 GLY110 PRO111 LEU112 LEU113 TRP114 GLU115 THR116 GLN117 LEU118 GLY119 LEU120 ALA121 PHE122 LEU123 ARG124 GLY125 LEU126 SER127 TYR128 HIS129 ASP130 GLY131 ALA132 LEU133 VAL134 VAL135 THR136 LYS137 ALA138 GLY139 TYR140 TYR141 TYR142 ILE143 TYR144 SER145 LYS146 VAL147 GLN148 LEU149 GLY150 GLY151 VAL152 GLY153 CYS154 PRO155 LEU156 GLY157 LEU158 ALA159 SER160 THR161 ILE162 THR163 HIS164 GLY165 LEU166 TYR167 LYS168 ARG169 THR170 PRO171 ARG172 TYR173 PRO174 GLU175 GLU176 LEU177 GLU178 LEU179 LEU180 VAL181 SER182 GLN183 GLN184 SER185 PRO186 CYS187 GLY188 ARG189 ALA190 THR191 SER192 SER193 SER194 ARG195 VAL196 TRP197 TRP198 ASP199 SER200 SER201 PHE202 LEU203 GLY204 GLY205 VAL206 VAL207 HIS208 LEU209 GLU210 ALA211 GLY212 GLU213 GLU214 VAL215 VAL216 VAL217 ARG218 VAL219 LEU220 ASP221 GLU222 ARG223 LEU224 VAL225 ARG226 LEU227 ARG228 ASP229 GLY230 THR231 ARG232 SER233 TYR234 PHE235 GLY236 ALA237 PHE238 MET239 VAL240 |
Unit 2 | GLU91 VAL92 ASN93 PRO94 ALA95 ALA96 HIS97 LEU98 THR99 GLY100 ALA101 ASN102 SER103 SER104 LEU105 THR106 GLY107 SER108 GLY109 GLY110 PRO111 LEU112 LEU113 TRP114 GLU115 THR116 GLN117 LEU118 GLY119 LEU120 ALA121 PHE122 LEU123 ARG124 GLY125 LEU126 SER127 TYR128 HIS129 ASP130 GLY131 ALA132 LEU133 VAL134 VAL135 THR136 LYS137 ALA138 GLY139 TYR140 TYR141 TYR142 ILE143 TYR144 SER145 LYS146 VAL147 GLN148 LEU149 GLY150 GLY151 VAL152 GLY153 CYS154 SER160 THR161 ILE162 THR163 HIS164 GLY165 LEU166 TYR167 LYS168 ARG169 THR170 PRO171 ARG172 TYR173 PRO174 GLU175 GLU176 LEU177 GLU178 LEU179 LEU180 VAL181 SER182 GLN183 GLN184 SER185 PRO186 CYS187 THR191 SER192 SER193 SER194 ARG195 VAL196 TRP197 TRP198 ASP199 SER200 SER201 PHE202 LEU203 GLY204 GLY205 VAL206 VAL207 HIS208 LEU209 GLU210 ALA211 GLY212 GLU213 GLU214 VAL215 VAL216 VAL217 ARG218 VAL219 LEU220 ASP221 GLU222 ARG223 LEU224 VAL225 ARG226 LEU227 ARG228 ASP229 GLY230 THR231 ARG232 SER233 TYR234 PHE235 GLY236 ALA237 PHE238 MET239 VAL240 |
Unit 3 | VAL92 ASN93 PRO94 ALA95 ALA96 HIS97 LEU98 THR99 GLY100 ALA101 ASN102 SER103 SER104 LEU105 THR106 GLY107 SER108 GLY109 GLY110 PRO111 LEU112 LEU113 TRP114 GLU115 THR116 GLN117 LEU118 GLY119 LEU120 ALA121 PHE122 LEU123 ARG124 GLY125 LEU126 SER127 TYR128 HIS129 ASP130 GLY131 ALA132 LEU133 VAL134 VAL135 THR136 LYS137 ALA138 GLY139 TYR140 TYR141 TYR142 ILE143 TYR144 SER145 LYS146 VAL147 GLN148 LEU149 GLY150 GLY151 VAL152 GLY153 CYS154 THR161 ILE162 THR163 HIS164 GLY165 LEU166 TYR167 LYS168 ARG169 THR170 PRO171 ARG172 TYR173 PRO174 GLU175 GLU176 LEU177 GLU178 LEU179 LEU180 VAL181 SER182 GLN183 GLN184 SER185 PRO186 CYS187 SER193 SER194 ARG195 VAL196 TRP197 TRP198 ASP199 SER200 SER201 PHE202 LEU203 GLY204 GLY205 VAL206 VAL207 HIS208 LEU209 GLU210 ALA211 GLY212 GLU213 GLU214 VAL215 VAL216 VAL217 ARG218 VAL219 LEU220 ASP221 GLU222 ARG223 LEU224 VAL225 ARG226 LEU227 ARG228 ASP229 GLY230 THR231 ARG232 SER233 TYR234 PHE235 GLY236 ALA237 PHE238 MET239 VAL240 |
Unit 4 | SER38 LEU39 PRO40 SER41 CYS42 LYS43 GLU44 ASP45 GLU46 TYR47 PRO48 VAL49 GLY50 SER51 GLU52 CYS53 CYS54 PRO55 LYS56 CYS57 SER58 PRO59 GLY60 TYR61 ARG62 VAL63 LYS64 GLU65 ALA66 CYS67 GLY68 GLU69 LEU70 THR71 GLY72 THR73 VAL74 CYS75 GLU76 PRO77 CYS78 PRO79 PRO80 GLY81 THR82 TYR83 ILE84 ALA85 HIS86 LEU87 ASN88 GLY89 LEU90 SER91 LYS92 CYS93 LEU94 GLN95 CYS96 GLN97 MET98 CYS99 ASP100 PRO101 ALA102 MET103 GLY104 LEU105 ARG106 ALA107 SER108 ARG109 ASN110 CYS111 SER112 ARG113 THR114 GLU115 ASN116 ALA117 VAL118 CYS119 GLY120 CYS121 SER122 PRO123 GLY124 HIS125 PHE126 CYS127 ILE128 VAL129 GLN130 ASP131 GLY132 ASP133 HIS134 CYS135 ALA136 ALA137 CYS138 ARG139 ALA140 TYR141 ALA142 |
Unit 5 | ARG37 SER38 LEU39 PRO40 SER41 CYS42 LYS43 GLU44 ASP45 GLU46 TYR47 PRO48 VAL49 GLY50 SER51 GLU52 CYS53 CYS54 PRO55 LYS56 CYS57 SER58 PRO59 GLY60 TYR61 ARG62 VAL63 LYS64 GLU65 ALA66 CYS67 GLY68 GLU69 LEU70 THR71 GLY72 THR73 VAL74 CYS75 GLU76 PRO77 CYS78 PRO79 PRO80 GLY81 THR82 TYR83 ILE84 ALA85 HIS86 LEU87 ASN88 GLY89 LEU90 SER91 LYS92 CYS93 LEU94 GLN95 CYS96 GLN97 MET98 CYS99 ASP100 PRO101 ALA102 MET103 GLY104 LEU105 ARG106 ALA107 SER108 ARG109 ASN110 CYS111 SER112 ARG113 THR114 GLU115 ASN116 ALA117 VAL118 CYS119 GLY120 CYS121 SER122 PRO123 GLY124 HIS125 PHE126 CYS127 ILE128 VAL129 HIS134 CYS135 ALA136 ALA137 CYS138 ARG139 ALA140 TYR141 |
Unit 6 | SER38 LEU39 PRO40 SER41 CYS42 LYS43 GLU44 ASP45 GLU46 TYR47 PRO48 VAL49 GLY50 SER51 GLU52 CYS53 CYS54 PRO55 LYS56 CYS57 SER58 PRO59 GLY60 TYR61 ARG62 VAL63 LYS64 GLU65 ALA66 CYS67 GLY68 GLU69 LEU70 THR71 GLY72 THR73 VAL74 CYS75 GLU76 PRO77 CYS78 PRO79 PRO80 GLY81 THR82 TYR83 ILE84 ALA85 HIS86 LEU87 ASN88 GLY89 LEU90 SER91 LYS92 CYS93 LEU94 GLN95 CYS96 GLN97 MET98 CYS99 ASP100 PRO101 ALA102 MET103 GLY104 LEU105 ARG106 ALA107 SER108 ARG109 ASN110 CYS111 SER112 ARG113 THR114 GLU115 ASN116 ALA117 VAL118 CYS119 GLY120 CYS121 SER122 PRO123 GLY124 HIS125 PHE126 CYS127 ILE128 VAL129 CYS135 ALA136 ALA137 CYS138 ARG139 ALA140 |
Unit 7 | GLU91 VAL92 ASN93 PRO94 ALA95 ALA96 HIS97 LEU98 THR99 GLY100 ALA101 ASN102 SER103 SER104 LEU105 THR106 GLY107 SER108 GLY109 GLY110 PRO111 LEU112 LEU113 TRP114 GLU115 THR116 GLN117 LEU118 GLY119 LEU120 ALA121 PHE122 LEU123 ARG124 GLY125 LEU126 SER127 TYR128 HIS129 ASP130 GLY131 ALA132 LEU133 VAL134 VAL135 THR136 LYS137 ALA138 GLY139 TYR140 TYR141 TYR142 ILE143 TYR144 SER145 LYS146 VAL147 GLN148 LEU149 GLY150 GLY151 VAL152 GLY153 CYS154 PRO155 LEU156 GLY157 LEU158 ALA159 SER160 THR161 ILE162 THR163 HIS164 GLY165 LEU166 TYR167 LYS168 ARG169 THR170 PRO171 ARG172 TYR173 PRO174 GLU175 GLU176 LEU177 GLU178 LEU179 LEU180 VAL181 SER182 GLN183 GLN184 SER185 PRO186 CYS187 GLY188 ARG189 ALA190 THR191 SER192 SER193 SER194 ARG195 VAL196 TRP197 TRP198 ASP199 SER200 SER201 PHE202 LEU203 GLY204 GLY205 VAL206 VAL207 HIS208 LEU209 GLU210 ALA211 GLY212 GLU213 GLU214 VAL215 VAL216 VAL217 ARG218 VAL219 LEU220 ASP221 GLU222 ARG223 LEU224 VAL225 ARG226 LEU227 ARG228 ASP229 GLY230 THR231 ARG232 SER233 TYR234 PHE235 GLY236 ALA237 PHE238 MET239 VAL240 |
Unit 8 | GLU91 VAL92 ASN93 PRO94 ALA95 ALA96 HIS97 LEU98 THR99 GLY100 ALA101 ASN102 SER103 SER104 LEU105 THR106 GLY107 SER108 GLY109 GLY110 PRO111 LEU112 LEU113 TRP114 GLU115 THR116 GLN117 LEU118 GLY119 LEU120 ALA121 PHE122 LEU123 ARG124 GLY125 LEU126 SER127 TYR128 HIS129 ASP130 GLY131 ALA132 LEU133 VAL134 VAL135 THR136 LYS137 ALA138 GLY139 TYR140 TYR141 TYR142 ILE143 TYR144 SER145 LYS146 VAL147 GLN148 LEU149 GLY150 GLY151 VAL152 GLY153 CYS154 PRO155 LEU156 GLY157 LEU158 ALA159 SER160 THR161 ILE162 THR163 HIS164 GLY165 LEU166 TYR167 LYS168 ARG169 THR170 PRO171 ARG172 TYR173 PRO174 GLU175 GLU176 LEU177 GLU178 LEU179 LEU180 VAL181 SER182 GLN183 GLN184 SER185 PRO186 CYS187 GLY188 ARG189 ALA190 THR191 SER192 SER193 SER194 ARG195 VAL196 TRP197 TRP198 ASP199 SER200 SER201 PHE202 LEU203 GLY204 GLY205 VAL206 VAL207 HIS208 LEU209 GLU210 ALA211 GLY212 GLU213 GLU214 VAL215 VAL216 VAL217 ARG218 VAL219 LEU220 ASP221 GLU222 ARG223 LEU224 VAL225 ARG226 LEU227 ARG228 ASP229 GLY230 THR231 ARG232 SER233 TYR234 PHE235 GLY236 ALA237 PHE238 MET239 VAL240 |
Unit 9 | VAL92 ASN93 PRO94 ALA95 ALA96 HIS97 LEU98 THR99 GLY100 ALA101 ASN102 SER103 SER104 LEU105 THR106 GLY107 SER108 GLY109 GLY110 PRO111 LEU112 LEU113 TRP114 GLU115 THR116 GLN117 LEU118 GLY119 LEU120 ALA121 PHE122 LEU123 ARG124 GLY125 LEU126 SER127 TYR128 HIS129 ASP130 GLY131 ALA132 LEU133 VAL134 VAL135 THR136 LYS137 ALA138 GLY139 TYR140 TYR141 TYR142 ILE143 TYR144 SER145 LYS146 VAL147 GLN148 LEU149 GLY150 GLY151 VAL152 GLY153 CYS154 PRO155 LEU158 ALA159 SER160 THR161 ILE162 THR163 HIS164 GLY165 LEU166 TYR167 LYS168 ARG169 THR170 PRO171 ARG172 TYR173 PRO174 GLU175 GLU176 LEU177 GLU178 LEU179 LEU180 VAL181 SER182 GLN183 GLN184 SER185 PRO186 CYS187 GLY188 ARG189 ALA190 THR191 SER192 SER193 SER194 ARG195 VAL196 TRP197 TRP198 ASP199 SER200 SER201 PHE202 LEU203 GLY204 GLY205 VAL206 VAL207 HIS208 LEU209 GLU210 ALA211 GLY212 GLU213 GLU214 VAL215 VAL216 VAL217 ARG218 VAL219 LEU220 ASP221 GLU222 ARG223 LEU224 VAL225 ARG226 LEU227 ARG228 ASP229 GLY230 THR231 ARG232 SER233 TYR234 PHE235 GLY236 ALA237 PHE238 MET239 VAL240 |
Unit 10 | ARG37 SER38 LEU39 PRO40 SER41 CYS42 LYS43 GLU44 ASP45 GLU46 TYR47 PRO48 VAL49 GLY50 SER51 GLU52 CYS53 CYS54 PRO55 LYS56 CYS57 SER58 PRO59 GLY60 TYR61 ARG62 VAL63 LYS64 GLU65 ALA66 CYS67 GLY68 GLU69 LEU70 THR71 GLY72 THR73 VAL74 CYS75 GLU76 PRO77 CYS78 PRO79 PRO80 GLY81 THR82 TYR83 ILE84 ALA85 HIS86 LEU87 ASN88 GLY89 LEU90 SER91 LYS92 CYS93 LEU94 GLN95 CYS96 GLN97 MET98 CYS99 ASP100 PRO101 ALA102 MET103 GLY104 LEU105 ARG106 ALA107 SER108 ARG109 ASN110 CYS111 SER112 ARG113 THR114 GLU115 ASN116 ALA117 VAL118 CYS119 GLY120 CYS121 SER122 PRO123 GLY124 HIS125 PHE126 CYS127 ILE128 VAL129 GLN130 ASP131 GLY132 ASP133 HIS134 CYS135 ALA136 ALA137 CYS138 ARG139 ALA140 TYR141 ALA142 |
Unit 11 | ARG37 SER38 LEU39 PRO40 SER41 CYS42 LYS43 GLU44 ASP45 GLU46 TYR47 PRO48 VAL49 GLY50 SER51 GLU52 CYS53 CYS54 PRO55 LYS56 CYS57 SER58 PRO59 GLY60 TYR61 ARG62 VAL63 LYS64 GLU65 ALA66 CYS67 GLY68 GLU69 LEU70 THR71 GLY72 THR73 VAL74 CYS75 GLU76 PRO77 CYS78 PRO79 PRO80 GLY81 THR82 TYR83 ILE84 ALA85 HIS86 LEU87 ASN88 GLY89 LEU90 SER91 LYS92 CYS93 LEU94 GLN95 CYS96 GLN97 MET98 CYS99 ASP100 PRO101 ALA102 MET103 GLY104 LEU105 ARG106 ALA107 SER108 ARG109 ASN110 CYS111 SER112 ARG113 THR114 GLU115 ASN116 ALA117 VAL118 CYS119 GLY120 CYS121 SER122 PRO123 GLY124 HIS125 PHE126 CYS127 ILE128 VAL129 GLN130 ASP131 GLY132 ASP133 HIS134 CYS135 ALA136 ALA137 CYS138 ARG139 ALA140 TYR141 ALA142 |
Unit 12 | SER41 CYS42 LYS43 GLU44 ASP45 GLU46 TYR47 PRO48 VAL49 GLY50 SER51 GLU52 CYS53 CYS54 PRO55 LYS56 CYS57 SER58 PRO59 GLY60 TYR61 ARG62 VAL63 LYS64 GLU65 ALA66 CYS67 GLY68 GLU69 LEU70 THR71 GLY72 THR73 VAL74 CYS75 GLU76 PRO77 CYS78 PRO79 PRO80 GLY81 THR82 TYR83 ILE84 ALA85 HIS86 LEU87 ASN88 GLY89 LEU90 SER91 LYS92 CYS93 LEU94 GLN95 CYS96 GLN97 MET98 CYS99 ASP100 PRO101 ALA102 MET103 GLY104 LEU105 ARG106 ALA107 SER108 ARG109 ASN110 CYS111 SER112 ARG113 THR114 GLU115 ASN116 ALA117 VAL118 CYS119 GLY120 CYS121 SER122 PRO123 GLY124 HIS125 PHE126 CYS127 ILE128 VAL129 GLN130 ASP131 GLY132 ASP133 HIS134 CYS135 ALA136 ALA137 CYS138 ARG139 ALA140 TYR141 ALA142 THR143 SER144 |