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(-) Description

Title :  CRYSTAL STRUCTURE OF A RECOMBINANT EV71 VIRUS PARTICLE
 
Authors :  R. Chen, K. Lyu
Date :  06 Nov 14  (Deposition) - 17 Dec 14  (Release) - 15 Apr 15  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  3.10
Chains :  Asym. Unit :  A,B,C,E,F,G,I,J,K,M,N,O,Q,R,S
Biol. Unit 1:  A,B,C,E,F,G,I,J,K,M,N,O,Q,R,S  (12x)
Keywords :  Beta Barrel, Eight-Stranded Beta Barrel, Replicate In The Cytoplasm, Virus (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  K. Lyu, G. C. Wang, Y. L. He, J. F. Han, Q. Ye, C. F. Qin, R. Chen
Crystal Structures Of Enterovirus 71 (Ev71) Recombinant Virus Particles Provide Insights Into Vaccine Design.
J. Biol. Chem. V. 290 3198 2015
PubMed-ID: 25492868  |  Reference-DOI: 10.1074/JBC.M114.624536

(-) Compounds

Molecule 1 - CAPSID PROTEIN VP1
    Chains: E, Q, I, M, A
    Engineered: YES
    Expression System: HOMO SAPIENS
    Expression System Cell Line: RD CELLS
    Expression System Taxid: 9606
    Mutation: YES
    Organism Scientific: ENTEROVIRUS A71
    Organism Taxid: 39054
 
Molecule 2 - CAPSID PROTEIN VP3
    Chains: F, R, J, N, B
    Engineered: YES
    Expression System: HOMO SAPIENS
    Expression System Cell Line: RD CELLS
    Expression System Taxid: 9606
    Organism Scientific: ENTEROVIRUS A71
    Organism Taxid: 39054
 
Molecule 3 - CAPSID PROTEIN VP0
    Chains: G, S, K, O, C
    Engineered: YES
    Expression System: HOMO SAPIENS
    Expression System Cell Line: RD CELLS
    Expression System Taxid: 9606
    Organism Scientific: ENTEROVIRUS A71
    Organism Taxid: 39054

 Structural Features

(-) Chains, Units

  123456789101112131415
Asymmetric Unit : ABCEFGIJKMNOQRS
Biological Unit 1 (12x): ABCEFGIJKMNOQRS

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 4RR3)

(-) Sites  (0, 0)

(no "Site" information available for 4RR3)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4RR3)

(-) Cis Peptide Bonds  (45, 45)

Asymmetric Unit
No.Residues
1Arg E:102 -Lys E:103
2Arg E:104 -Ala E:105
3Ala E:105 -Arg E:106
4Arg E:106 -Leu E:107
5Thr G:94 -Gln G:95
6Ser G:114 -Asp G:115
7Ala G:116 -Thr G:117
8Asp G:126 -Val G:127
9Phe G:151 -Pro G:152
10Arg Q:102 -Lys Q:103
11Arg Q:104 -Ala Q:105
12Ala Q:105 -Arg Q:106
13Arg Q:106 -Leu Q:107
14Arg I:102 -Lys I:103
15Arg I:104 -Ala I:105
16Ala I:105 -Arg I:106
17Arg I:106 -Leu I:107
18Arg M:102 -Lys M:103
19Arg M:104 -Ala M:105
20Ala M:105 -Arg M:106
21Arg M:106 -Leu M:107
22Arg A:102 -Lys A:103
23Arg A:104 -Ala A:105
24Ala A:105 -Arg A:106
25Arg A:106 -Leu A:107
26Thr S:94 -Gln S:95
27Ser S:114 -Asp S:115
28Ala S:116 -Thr S:117
29Asp S:126 -Val S:127
30Phe S:151 -Pro S:152
31Thr K:94 -Gln K:95
32Ser K:114 -Asp K:115
33Ala K:116 -Thr K:117
34Asp K:126 -Val K:127
35Phe K:151 -Pro K:152
36Thr O:94 -Gln O:95
37Ser O:114 -Asp O:115
38Ala O:116 -Thr O:117
39Asp O:126 -Val O:127
40Phe O:151 -Pro O:152
41Thr C:94 -Gln C:95
42Ser C:114 -Asp C:115
43Ala C:116 -Thr C:117
44Asp C:126 -Val C:127
45Phe C:151 -Pro C:152

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4RR3)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4RR3)

(-) Exons   (0, 0)

(no "Exon" information available for 4RR3)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:232
                                                                                                                                                                                                                                                                        
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...hhhhhhhhhhh..eeeeeeee.................eeee.hhhhhhhhhhhhh...eee..eeeeeeee.........eeeeeee...........hhhhhh....eeeee.....eeeee........ee......................hhhhh..eeeeee.........eeeeeeeee...ee..................................... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4rr3 A  72 SHSTAETTLDSFFSRAGLVGEIDLPLEGTERKRARLTPNGYANWDIDITGYAQMRRKVELFTYMRFDAEFTFVACTPTGEVVPQLLQYMFVPPGAPKPDSRESLAWQTATNPSVFVKLSDPPAQVSVPFMSPASAYQWFYDGYPTFGEHKQEKDLEYGACPNNMMGTFSVRTVGTSKSKYPLVVRIYMRMKHVRAWIPRPMRNQNYLFKANPNYAGNSIKPTGASRTAITTL 303
                                    81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301  


Chain B from PDB  Type:PROTEIN  Length:230
                                                                                                                                                                                                                                                                      
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeee......ee.......ee...................hhhhhh..ee...........hhhhh.eee........eee...ee.....hhhhhhhhhhhhh....eeeeeeeeeee........eeeeeee........hhhhhhh.eeeeee......eeeeeeeee........eeeeeee..............eeeeeeee....ee.............. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4rr3 B   1 GFPTELKPGTNQFLTTDDGVSAPILPNFHPTPCIHIPGEVRNLLELCQVETILEVNNVPTNATSLMERLRFPVSAQAGKGELCAVFRADPGRSGPWQSTLLGQLCGYYTQWSGSLEVTFMFTGSFMATGKMLIAYTPPGGPLPKDRATAMLGTHVIWDFGLQSSVTLVIPWISNTHYRYTTGLVSIWYQTNYVVPIGAPNTAYIIALAAAQKNFTMQLCKDASDILQTGT 240
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       190       200       210       220       230       240
                                                                                                                                                                                                           178|                                                   
                                                                                                                                                                                                            189                                                   


Chain C from PDB  Type:PROTEIN  Length:242
                                                                                                                                                                                                                                                                                  
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eee....eee.........ee.hhh..........................ee...eee......eeeeehhhhh.hhhhhhhhhh...ee..eeeeeee......eeeeeeeeee..................hhhhhhhhhhhee..hhhhh....hhhhhhhh.eeeee.....eeeeee................eeeeeeeeeeee........eeeeeeeee...ee....... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4rr3 C  80 DRVAQLTIGNSTITTQEAANIIVGYGEWPSYCSDSDATAVDKPTRPDVSVNRFYTLDTKLWEKSSKGWYWKFPDVLTETGVFGQNAQFHYLYRSGFCIHVQCNASKFHQGALLVAVLPEYVIGTVAGGTGTEDSHPPYKQTQPGADGFELQHPYVLDAGIPISQLTVCPHQWINLRTNNCATIIVPYINALPFDSALNHCNFGLLVVPISPLDYDQGATPVIPITITLAPMCSEFAGLRQAV 321
                                    89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       259       269       279       289       299       309       319  


Chain E from PDB  Type:PROTEIN  Length:232
                                                                                                                                                                                                                                                                        
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...hhhhhhhhhhh..eeeeeeee.................eeee.hhhhhhhhhhhhh...eee..eeeeeeee.........eeeeeee...........hhhhhh....eeeee.....eeeee........ee......................hhhhh..eeeeee.........eeeeeeeee...ee..................................... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4rr3 E  72 SHSTAETTLDSFFSRAGLVGEIDLPLEGTERKRARLTPNGYANWDIDITGYAQMRRKVELFTYMRFDAEFTFVACTPTGEVVPQLLQYMFVPPGAPKPDSRESLAWQTATNPSVFVKLSDPPAQVSVPFMSPASAYQWFYDGYPTFGEHKQEKDLEYGACPNNMMGTFSVRTVGTSKSKYPLVVRIYMRMKHVRAWIPRPMRNQNYLFKANPNYAGNSIKPTGASRTAITTL 303
                                    81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301  


Chain F from PDB  Type:PROTEIN  Length:230
                                                                                                                                                                                                                                                                      
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeee......ee.......ee...................hhhhhh..ee...........hhhhh.eee........eeeeeeee.....hhhhhhhhhhhhh....eeeeeeeeeee........eeeeeee........hhhhhhh.eeeeee......eeeeeeeee........eeeeeee..............eeeeeeee....ee.............. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4rr3 F   1 GFPTELKPGTNQFLTTDDGVSAPILPNFHPTPCIHIPGEVRNLLELCQVETILEVNNVPTNATSLMERLRFPVSAQAGKGELCAVFRADPGRSGPWQSTLLGQLCGYYTQWSGSLEVTFMFTGSFMATGKMLIAYTPPGGPLPKDRATAMLGTHVIWDFGLQSSVTLVIPWISNTHYRYTTGLVSIWYQTNYVVPIGAPNTAYIIALAAAQKNFTMQLCKDASDILQTGT 240
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       190       200       210       220       230       240
                                                                                                                                                                                                           178|                                                   
                                                                                                                                                                                                            189                                                   


Chain G from PDB  Type:PROTEIN  Length:242
                                                                                                                                                                                                                                                                                  
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eee....eee.........ee.hhh..........................ee...eee......eeeeehhhhh.hhhhhhhhhh...ee..eeeeeee......eeeeeeeeee..................hhhhhhhhhhhee..hhhhh....hhhhhhhh.eeeee.....eeeeee................eeeeeeeeeeee........eeeeeeeee...ee....... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4rr3 G  80 DRVAQLTIGNSTITTQEAANIIVGYGEWPSYCSDSDATAVDKPTRPDVSVNRFYTLDTKLWEKSSKGWYWKFPDVLTETGVFGQNAQFHYLYRSGFCIHVQCNASKFHQGALLVAVLPEYVIGTVAGGTGTEDSHPPYKQTQPGADGFELQHPYVLDAGIPISQLTVCPHQWINLRTNNCATIIVPYINALPFDSALNHCNFGLLVVPISPLDYDQGATPVIPITITLAPMCSEFAGLRQAV 321
                                    89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       259       269       279       289       299       309       319  


Chain I from PDB  Type:PROTEIN  Length:232
                                                                                                                                                                                                                                                                        
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...hhhhhhhhhhh..eeeeeeee.................eeee.hhhhhhhhhhhhh...eee..eeeeeeee.........eeeeeee...........hhhhhh....eeeee.....eeeee........ee......................hhhhh..eeeeee.........eeeeeeeee...ee..................................... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4rr3 I  72 SHSTAETTLDSFFSRAGLVGEIDLPLEGTERKRARLTPNGYANWDIDITGYAQMRRKVELFTYMRFDAEFTFVACTPTGEVVPQLLQYMFVPPGAPKPDSRESLAWQTATNPSVFVKLSDPPAQVSVPFMSPASAYQWFYDGYPTFGEHKQEKDLEYGACPNNMMGTFSVRTVGTSKSKYPLVVRIYMRMKHVRAWIPRPMRNQNYLFKANPNYAGNSIKPTGASRTAITTL 303
                                    81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301  


Chain J from PDB  Type:PROTEIN  Length:230
                                                                                                                                                                                                                                                                      
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeee......ee.......ee...................hhhhhh..ee...........hhhhhh.ee........eee...ee.....hhhhhhhhhhhhh....eeeeeeeeeee........eeeeee.........hhhhhhh.eeeeee......eeeeeeeee........ee..eee..............eeeeeeee....ee.............. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4rr3 J   1 GFPTELKPGTNQFLTTDDGVSAPILPNFHPTPCIHIPGEVRNLLELCQVETILEVNNVPTNATSLMERLRFPVSAQAGKGELCAVFRADPGRSGPWQSTLLGQLCGYYTQWSGSLEVTFMFTGSFMATGKMLIAYTPPGGPLPKDRATAMLGTHVIWDFGLQSSVTLVIPWISNTHYRYTTGLVSIWYQTNYVVPIGAPNTAYIIALAAAQKNFTMQLCKDASDILQTGT 240
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       190       200       210       220       230       240
                                                                                                                                                                                                           178|                                                   
                                                                                                                                                                                                            189                                                   


Chain K from PDB  Type:PROTEIN  Length:242
                                                                                                                                                                                                                                                                                  
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eee....eee.........ee.hhh..........................ee...eee......eeeeehhhhhhhhhhhhhhhh...ee..eeeeeee......eeeeeeeeee..................hhhhhhhhhhhee..hhhhh....hhhhhhhh.eeeee.....eeeeee................eeeeeeeeeeee........eeeeeeeee...ee....... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4rr3 K  80 DRVAQLTIGNSTITTQEAANIIVGYGEWPSYCSDSDATAVDKPTRPDVSVNRFYTLDTKLWEKSSKGWYWKFPDVLTETGVFGQNAQFHYLYRSGFCIHVQCNASKFHQGALLVAVLPEYVIGTVAGGTGTEDSHPPYKQTQPGADGFELQHPYVLDAGIPISQLTVCPHQWINLRTNNCATIIVPYINALPFDSALNHCNFGLLVVPISPLDYDQGATPVIPITITLAPMCSEFAGLRQAV 321
                                    89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       259       269       279       289       299       309       319  


Chain M from PDB  Type:PROTEIN  Length:232
                                                                                                                                                                                                                                                                        
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...hhhhhhhhhhh..eeeeeeee.................eeee.hhhhhhhhhhhhh...eee..eeeeeeee.........eeeeeee...........hhhhhh....eeeee.....eeeee........ee......................hhhhh..eeeeee.........eeeeeeeee...ee..................................... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4rr3 M  72 SHSTAETTLDSFFSRAGLVGEIDLPLEGTERKRARLTPNGYANWDIDITGYAQMRRKVELFTYMRFDAEFTFVACTPTGEVVPQLLQYMFVPPGAPKPDSRESLAWQTATNPSVFVKLSDPPAQVSVPFMSPASAYQWFYDGYPTFGEHKQEKDLEYGACPNNMMGTFSVRTVGTSKSKYPLVVRIYMRMKHVRAWIPRPMRNQNYLFKANPNYAGNSIKPTGASRTAITTL 303
                                    81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301  


Chain N from PDB  Type:PROTEIN  Length:230
                                                                                                                                                                                                                                                                      
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeee......ee.......ee...................hhhhhh..ee........hhhhhhhh.eee........eeeeeeee.....hhhhhhhhhhhhh....eeeeeeeeeee........eeeeeee........hhhhhhh..eeeee......eeeeeeeee........eeeeeee..............eeeeeeee....ee.............. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4rr3 N   1 GFPTELKPGTNQFLTTDDGVSAPILPNFHPTPCIHIPGEVRNLLELCQVETILEVNNVPTNATSLMERLRFPVSAQAGKGELCAVFRADPGRSGPWQSTLLGQLCGYYTQWSGSLEVTFMFTGSFMATGKMLIAYTPPGGPLPKDRATAMLGTHVIWDFGLQSSVTLVIPWISNTHYRYTTGLVSIWYQTNYVVPIGAPNTAYIIALAAAQKNFTMQLCKDASDILQTGT 240
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       190       200       210       220       230       240
                                                                                                                                                                                                           178|                                                   
                                                                                                                                                                                                            189                                                   


Chain O from PDB  Type:PROTEIN  Length:242
                                                                                                                                                                                                                                                                                  
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eee....eee.........ee.hhh..........................ee...eee......eeeeehhhhhhhhhhhhhhhh...ee..eeeeeee......eeeeeeeeee..................hhhhhhhhhhhee..hhhhh....hhhhhhhh.eeeee.....eeeeee................eeeeeeeeeeee........eeeeeeeee...ee....... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4rr3 O  80 DRVAQLTIGNSTITTQEAANIIVGYGEWPSYCSDSDATAVDKPTRPDVSVNRFYTLDTKLWEKSSKGWYWKFPDVLTETGVFGQNAQFHYLYRSGFCIHVQCNASKFHQGALLVAVLPEYVIGTVAGGTGTEDSHPPYKQTQPGADGFELQHPYVLDAGIPISQLTVCPHQWINLRTNNCATIIVPYINALPFDSALNHCNFGLLVVPISPLDYDQGATPVIPITITLAPMCSEFAGLRQAV 321
                                    89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       259       269       279       289       299       309       319  


Chain Q from PDB  Type:PROTEIN  Length:232
                                                                                                                                                                                                                                                                        
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...hhhhhhhhhhh..eeeeeeee.................eeee.hhhhhhhhhhhhh...eee..eeeeeeee.........eeeeeee...........hhhhhh....eeeee.....eeeee........ee......................hhhhh..eeeeee.........eeeeeeeee...ee..................................... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4rr3 Q  72 SHSTAETTLDSFFSRAGLVGEIDLPLEGTERKRARLTPNGYANWDIDITGYAQMRRKVELFTYMRFDAEFTFVACTPTGEVVPQLLQYMFVPPGAPKPDSRESLAWQTATNPSVFVKLSDPPAQVSVPFMSPASAYQWFYDGYPTFGEHKQEKDLEYGACPNNMMGTFSVRTVGTSKSKYPLVVRIYMRMKHVRAWIPRPMRNQNYLFKANPNYAGNSIKPTGASRTAITTL 303
                                    81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301  


Chain R from PDB  Type:PROTEIN  Length:230
                                                                                                                                                                                                                                                                      
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeee......ee.......ee...................hhhhhh..ee...........hhhhh.eee........eee...ee.....hhhhhhhhhhhhh....eeeeeeeeeee........eeeeee.........hhhhhhh.eeeeee......eeeeeeeee........ee..eee..............eeeeeeee....ee.............. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4rr3 R   1 GFPTELKPGTNQFLTTDDGVSAPILPNFHPTPCIHIPGEVRNLLELCQVETILEVNNVPTNATSLMERLRFPVSAQAGKGELCAVFRADPGRSGPWQSTLLGQLCGYYTQWSGSLEVTFMFTGSFMATGKMLIAYTPPGGPLPKDRATAMLGTHVIWDFGLQSSVTLVIPWISNTHYRYTTGLVSIWYQTNYVVPIGAPNTAYIIALAAAQKNFTMQLCKDASDILQTGT 240
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       190       200       210       220       230       240
                                                                                                                                                                                                           178|                                                   
                                                                                                                                                                                                            189                                                   


Chain S from PDB  Type:PROTEIN  Length:242
                                                                                                                                                                                                                                                                                  
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eee....eee.........ee.hhh..........................ee...eee......eeeeehhhhh.hhhhhhhhhh...ee..eeeeeee......eeeeeeeeee..................hhhhhhhhhhhee..hhhhh....hhhhhhhh.eeeee.....eeeeee................eeeeeeeeeeee........eeeeeeeee...ee....... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4rr3 S  80 DRVAQLTIGNSTITTQEAANIIVGYGEWPSYCSDSDATAVDKPTRPDVSVNRFYTLDTKLWEKSSKGWYWKFPDVLTETGVFGQNAQFHYLYRSGFCIHVQCNASKFHQGALLVAVLPEYVIGTVAGGTGTEDSHPPYKQTQPGADGFELQHPYVLDAGIPISQLTVCPHQWINLRTNNCATIIVPYINALPFDSALNHCNFGLLVVPISPLDYDQGATPVIPITITLAPMCSEFAGLRQAV 321
                                    89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       259       269       279       289       299       309       319
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4RR3)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4RR3)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4RR3)

(-) Gene Ontology  (36, 36)

Asymmetric Unit(hide GO term definitions)

 Visualization

(-) Interactive Views

Asymmetric Unit
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  Ligands, Modified Residues, Ions
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  Sites
(no "Sites" information available for 4rr3)
 
  Cis Peptide Bonds
    Ala A:105 - Arg A:106   [ RasMol ]  
    Ala C:116 - Thr C:117   [ RasMol ]  
    Ala E:105 - Arg E:106   [ RasMol ]  
    Ala G:116 - Thr G:117   [ RasMol ]  
    Ala I:105 - Arg I:106   [ RasMol ]  
    Ala K:116 - Thr K:117   [ RasMol ]  
    Ala M:105 - Arg M:106   [ RasMol ]  
    Ala O:116 - Thr O:117   [ RasMol ]  
    Ala Q:105 - Arg Q:106   [ RasMol ]  
    Ala S:116 - Thr S:117   [ RasMol ]  
    Arg A:102 - Lys A:103   [ RasMol ]  
    Arg A:104 - Ala A:105   [ RasMol ]  
    Arg A:106 - Leu A:107   [ RasMol ]  
    Arg E:102 - Lys E:103   [ RasMol ]  
    Arg E:104 - Ala E:105   [ RasMol ]  
    Arg E:106 - Leu E:107   [ RasMol ]  
    Arg I:102 - Lys I:103   [ RasMol ]  
    Arg I:104 - Ala I:105   [ RasMol ]  
    Arg I:106 - Leu I:107   [ RasMol ]  
    Arg M:102 - Lys M:103   [ RasMol ]  
    Arg M:104 - Ala M:105   [ RasMol ]  
    Arg M:106 - Leu M:107   [ RasMol ]  
    Arg Q:102 - Lys Q:103   [ RasMol ]  
    Arg Q:104 - Ala Q:105   [ RasMol ]  
    Arg Q:106 - Leu Q:107   [ RasMol ]  
    Asp C:126 - Val C:127   [ RasMol ]  
    Asp G:126 - Val G:127   [ RasMol ]  
    Asp K:126 - Val K:127   [ RasMol ]  
    Asp O:126 - Val O:127   [ RasMol ]  
    Asp S:126 - Val S:127   [ RasMol ]  
    Phe C:151 - Pro C:152   [ RasMol ]  
    Phe G:151 - Pro G:152   [ RasMol ]  
    Phe K:151 - Pro K:152   [ RasMol ]  
    Phe O:151 - Pro O:152   [ RasMol ]  
    Phe S:151 - Pro S:152   [ RasMol ]  
    Ser C:114 - Asp C:115   [ RasMol ]  
    Ser G:114 - Asp G:115   [ RasMol ]  
    Ser K:114 - Asp K:115   [ RasMol ]  
    Ser O:114 - Asp O:115   [ RasMol ]  
    Ser S:114 - Asp S:115   [ RasMol ]  
    Thr C:94 - Gln C:95   [ RasMol ]  
    Thr G:94 - Gln G:95   [ RasMol ]  
    Thr K:94 - Gln K:95   [ RasMol ]  
    Thr O:94 - Gln O:95   [ RasMol ]  
    Thr S:94 - Gln S:95   [ RasMol ]  
 
Biological Unit
  Complete Structure
    Biological Unit 1  [ Jena3D ]

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  4rr3
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  F6KTB0_9ENTO | F6KTB0
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  F6KTB0_9ENTO | F6KTB0
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/TrEMBL
        F6KTB0_9ENTO | F6KTB0: 3sjk 4rqp 4rs5 4yvs 4yvw

(-) Related Entries Specified in the PDB File

4n43 CRYSTAL STRUCTURE OF AN UNCOATING INTERMEDIATE OF A CLINICAL C4 STRAIN EV71
4n53 CRYSTAL STRUCTURE OF A CLINICAL C4 STRAIN EV71 VIRION
4rqp CRYSTAL STRUCTURE OF THE EMPTY PARTICLE OF A CLINICAL C4 STRAIN EV71
4rs5 CRYSTAL STRUCTURE OF THE EMPTY PARTICLE OF A EV71 RECOMBINANT VIRUS