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(-) Description

Title :  CRYSTAL STRUCTURE OF THE NATUALLY OCCURRING EMPTY PARTICLE OF A CLINICAL C4 STRAIN EV71
 
Authors :  R. Chen, K. Lyu
Date :  04 Nov 14  (Deposition) - 17 Dec 14  (Release) - 15 Apr 15  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  3.15
Chains :  Asym. Unit :  A,B,C,E,F,G,I,J,K,M,N,O,Q,R,S
Biol. Unit 1:  A,B,C,E,F,G,I,J,K,M,N,O,Q,R,S  (12x)
Keywords :  Beta Barrel, Icosahedral Virus, Natually Occurring Empty Particle With Unknown Function, Replicate In Host Cell Cytoplasm, Virus (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  K. Lyu, G. C. Wang, Y. L. He, J. F. Han, Q. Ye, C. F. Qin, R. Chen
Crystal Structures Of Enterovirus 71 (Ev71) Recombinant Virus Particles Provide Insights Into Vaccine Design.
J. Biol. Chem. V. 290 3198 2015
PubMed-ID: 25492868  |  Reference-DOI: 10.1074/JBC.M114.624536

(-) Compounds

Molecule 1 - CAPSID PROTEIN VP1
    Chains: E, Q, I, M, A
    Mutation: YES
    Organism Scientific: ENTEROVIRUS A71
    Organism Taxid: 39054
    Strain: A CLINICAL C4 STRAIN
 
Molecule 2 - CAPSID PROTEIN VP3
    Chains: F, R, J, N, B
    Organism Scientific: ENTEROVIRUS A71
    Organism Taxid: 39054
    Strain: A CLINICAL C4 STRAIN
 
Molecule 3 - CAPSID PROTEIN VP0
    Chains: G, S, K, O, C
    Organism Scientific: ENTEROVIRUS A71
    Organism Taxid: 39054
    Strain: A CLINICAL C4 STRAIN

 Structural Features

(-) Chains, Units

  123456789101112131415
Asymmetric Unit : ABCEFGIJKMNOQRS
Biological Unit 1 (12x): ABCEFGIJKMNOQRS

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 4RQP)

(-) Sites  (0, 0)

(no "Site" information available for 4RQP)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4RQP)

(-) Cis Peptide Bonds  (45, 45)

Asymmetric Unit
No.Residues
1Thr E:210 -Phe E:211
2Gly E:212 -Glu E:213
3Glu E:213 -His E:214
4Lys E:215 -Gln E:216
5Ala G:118 -Val G:119
6Val G:119 -Asp G:120
7Phe G:151 -Pro G:152
8Gly G:207 -Thr G:208
9Gly G:209 -Thr G:210
10Thr Q:210 -Phe Q:211
11Gly Q:212 -Glu Q:213
12Glu Q:213 -His Q:214
13Lys Q:215 -Gln Q:216
14Thr I:210 -Phe I:211
15Gly I:212 -Glu I:213
16Glu I:213 -His I:214
17Lys I:215 -Gln I:216
18Thr M:210 -Phe M:211
19Gly M:212 -Glu M:213
20Glu M:213 -His M:214
21Lys M:215 -Gln M:216
22Thr A:210 -Phe A:211
23Gly A:212 -Glu A:213
24Glu A:213 -His A:214
25Lys A:215 -Gln A:216
26Ala S:118 -Val S:119
27Val S:119 -Asp S:120
28Phe S:151 -Pro S:152
29Gly S:207 -Thr S:208
30Gly S:209 -Thr S:210
31Ala K:118 -Val K:119
32Val K:119 -Asp K:120
33Phe K:151 -Pro K:152
34Gly K:207 -Thr K:208
35Gly K:209 -Thr K:210
36Ala O:118 -Val O:119
37Val O:119 -Asp O:120
38Phe O:151 -Pro O:152
39Gly O:207 -Thr O:208
40Gly O:209 -Thr O:210
41Ala C:118 -Val C:119
42Val C:119 -Asp C:120
43Phe C:151 -Pro C:152
44Gly C:207 -Thr C:208
45Gly C:209 -Thr C:210

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4RQP)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4RQP)

(-) Exons   (0, 0)

(no "Exon" information available for 4RQP)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:223
                                                                                                                                                                                                                                                               
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhh.eeeeeeeee..........eeeee.hhhhhhhhhhhhh.eeeeeeeeeeeeeee.........eeeeeee...........hhhhhh....eeeee.....eeeee........ee.............................eeeeee.........eeeeeeeeeeeeeeeee................................. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4rqp A  74 STAETTLDSFFSRAGLVGEIDLPLEGTTNPNGYANWDIDITGYAQMRRKVELFTYMRFDAEFTFVACTPTGEVVPQLLQYMFVPPGAPKPDSRESLAWQTATNPSVFVKLSDPPAQVSVPFMSPASAYQWFYDGYPTFGEHKQEKDLEYGACPNNMMGTFSVRTVGTSKSKYPLVVRIYMRMKHVRAWIPRPMRNQNYLFKANPNYAGNSIKPTGASRTAITT 296
                                    83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253       263       273       283       293   


Chain B from PDB  Type:PROTEIN  Length:225
                                                                                                                                                                                                                                                                 
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeee......ee........................ee..hhhhhh..ee...........hhhhhhheeee......eeeee........hhhhhhhhhhhhh....eeeeeeeeeee........eeeeeee........hhhhhhh.eeeeee......eeeeeeee.......eeeeee............eeeeeeeeee....ee............ Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4rqp B   1 GFPTELKPGTNQFLTTDDGVSAPILPNFHPTPCIHIPGEVRNLLELCQVETILEVNNVPTNATSLMERLRFPVSAQAGKGELCAVFRADPGRSGPWQSTLLGQLCGYYTQWSGSLEVTFMFTGSFMATGKMLIAYTPPGGPLPKDRATAMLGTHVIWDFGLQSSVTLVIPWISNTYTTGLVSIWYQTNYVVPIGAPNTAYIIALAAAQKNFTMQLCKDASDILQT 238
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170    || 193       203       213       223       233     
                                                                                                                                                                                                        175|                                                 
                                                                                                                                                                                                         189                                                 


Chain C from PDB  Type:PROTEIN  Length:238
                                                                                                                                                                                                                                                                              
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeee..eeeee.....eee.hhh..........................ee...eee......eeeee.......hhhhhhhhh..eee..eeeeeee......eeeeeeeeee..................hhhhhh.....ee..hhhhh....hhhhhhhh.eeeee.....eeeeee................eeeeeeeeeeee........eeeeeeeee...eee.... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4rqp C  82 VAQLTIGNSTITTQEAANIIVGYGEWPSYCSDSDATAVDKPTRPDVSVNRFYTLDTKLWEKSSKGWYWKFPDVLTETGVFGQNAQFHYLYRSGFCIHVQCNASKFHQGALLVAVLPEYVIGTVAGGTGTEDSHPPYKQTQPGADGFELQHPYVLDAGIPISQLTVCPHQWINLRTNNCATIIVPYINALPFDSALNHCNFGLLVVPISPLDYDQGATPVIPITITLAPMCSEFAGLRQ 319
                                    91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311        


Chain E from PDB  Type:PROTEIN  Length:223
                                                                                                                                                                                                                                                               
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....hhhhhhh.eeeeeeeee..........eeeee.hhhhhhhhhhhhh.eeeeeeeeeeeeeee.........eeeeeee...........hhhhhh....eeeee.....eeeee........ee.............................eeeeee.........eeeeeeeeeeeeeeeee................................. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4rqp E  74 STAETTLDSFFSRAGLVGEIDLPLEGTTNPNGYANWDIDITGYAQMRRKVELFTYMRFDAEFTFVACTPTGEVVPQLLQYMFVPPGAPKPDSRESLAWQTATNPSVFVKLSDPPAQVSVPFMSPASAYQWFYDGYPTFGEHKQEKDLEYGACPNNMMGTFSVRTVGTSKSKYPLVVRIYMRMKHVRAWIPRPMRNQNYLFKANPNYAGNSIKPTGASRTAITT 296
                                    83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253       263       273       283       293   


Chain F from PDB  Type:PROTEIN  Length:225
                                                                                                                                                                                                                                                                 
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeee......ee........................ee..hhhhhh..ee...........hhhhh.eeeee......eeeee........hhhhhhhhhhhhh....eeeeeeeeeee........eeeeeee........hhhhhhh.eeeeee.......eeeeeee.......eeeeee............eeeeeeeeee....ee............ Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4rqp F   1 GFPTELKPGTNQFLTTDDGVSAPILPNFHPTPCIHIPGEVRNLLELCQVETILEVNNVPTNATSLMERLRFPVSAQAGKGELCAVFRADPGRSGPWQSTLLGQLCGYYTQWSGSLEVTFMFTGSFMATGKMLIAYTPPGGPLPKDRATAMLGTHVIWDFGLQSSVTLVIPWISNTYTTGLVSIWYQTNYVVPIGAPNTAYIIALAAAQKNFTMQLCKDASDILQT 238
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170    || 193       203       213       223       233     
                                                                                                                                                                                                        175|                                                 
                                                                                                                                                                                                         189                                                 


Chain G from PDB  Type:PROTEIN  Length:238
                                                                                                                                                                                                                                                                              
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeee..eeeee.....eee.hhh..........................ee...eee......eeeee.......hhhhhhhhh..eee..eeeeeee......eeeeeeeeee..................hhhhhh.....ee..hhhhh....hhhhhhhh.eeeee.....eeeeee................eeeeeeeeeeee........eeeeeeeee...eee.... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4rqp G  82 VAQLTIGNSTITTQEAANIIVGYGEWPSYCSDSDATAVDKPTRPDVSVNRFYTLDTKLWEKSSKGWYWKFPDVLTETGVFGQNAQFHYLYRSGFCIHVQCNASKFHQGALLVAVLPEYVIGTVAGGTGTEDSHPPYKQTQPGADGFELQHPYVLDAGIPISQLTVCPHQWINLRTNNCATIIVPYINALPFDSALNHCNFGLLVVPISPLDYDQGATPVIPITITLAPMCSEFAGLRQ 319
                                    91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311        


Chain I from PDB  Type:PROTEIN  Length:223
                                                                                                                                                                                                                                                               
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....hhhhhhh.eeeeeeeee..........eeeee.hhhhhhhhhhhhh.eeeeeeeeeeeeeee.........eeeeeee...........hhhhhh....eeeee.....eeeee........ee.............................eeeeee.........eeeeeeeeeeeeeeeee................................. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4rqp I  74 STAETTLDSFFSRAGLVGEIDLPLEGTTNPNGYANWDIDITGYAQMRRKVELFTYMRFDAEFTFVACTPTGEVVPQLLQYMFVPPGAPKPDSRESLAWQTATNPSVFVKLSDPPAQVSVPFMSPASAYQWFYDGYPTFGEHKQEKDLEYGACPNNMMGTFSVRTVGTSKSKYPLVVRIYMRMKHVRAWIPRPMRNQNYLFKANPNYAGNSIKPTGASRTAITT 296
                                    83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253       263       273       283       293   


Chain J from PDB  Type:PROTEIN  Length:225
                                                                                                                                                                                                                                                                 
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeee......ee........................ee..hhhhhh..ee...........hhhhhhheeee......eeeee........hhhhhhhhhhhhh....eeeeeeeeeee........eeeeeee........hhhhhhh.eeeeee.......eeeeeee.......eeeeee............eeeeeeeeee....ee............ Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4rqp J   1 GFPTELKPGTNQFLTTDDGVSAPILPNFHPTPCIHIPGEVRNLLELCQVETILEVNNVPTNATSLMERLRFPVSAQAGKGELCAVFRADPGRSGPWQSTLLGQLCGYYTQWSGSLEVTFMFTGSFMATGKMLIAYTPPGGPLPKDRATAMLGTHVIWDFGLQSSVTLVIPWISNTYTTGLVSIWYQTNYVVPIGAPNTAYIIALAAAQKNFTMQLCKDASDILQT 238
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170    || 193       203       213       223       233     
                                                                                                                                                                                                        175|                                                 
                                                                                                                                                                                                         189                                                 


Chain K from PDB  Type:PROTEIN  Length:238
                                                                                                                                                                                                                                                                              
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeee..eeeee.....eee.hhh..........................ee...eee......eeeee.......hhhhhhhhh..eee..eeeeeee......eeeeeeeeee..................hhhhhh.....ee..hhhhh....hhhhhhhh.eeeee.....eeeeee................eeeeeeeeeeee........eeeeeeeee...eee.... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4rqp K  82 VAQLTIGNSTITTQEAANIIVGYGEWPSYCSDSDATAVDKPTRPDVSVNRFYTLDTKLWEKSSKGWYWKFPDVLTETGVFGQNAQFHYLYRSGFCIHVQCNASKFHQGALLVAVLPEYVIGTVAGGTGTEDSHPPYKQTQPGADGFELQHPYVLDAGIPISQLTVCPHQWINLRTNNCATIIVPYINALPFDSALNHCNFGLLVVPISPLDYDQGATPVIPITITLAPMCSEFAGLRQ 319
                                    91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311        


Chain M from PDB  Type:PROTEIN  Length:223
                                                                                                                                                                                                                                                               
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....hhhhhhh.eeeeeeeee..........eeeee.hhhhhhhhhhhhh.eeeeeeeeeeeeeee.........eeeeeee...........hhhhhh....eeeee.....eeeee........ee.............................eeeeee.........eeeeeeeeeeeeeeeee................................. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4rqp M  74 STAETTLDSFFSRAGLVGEIDLPLEGTTNPNGYANWDIDITGYAQMRRKVELFTYMRFDAEFTFVACTPTGEVVPQLLQYMFVPPGAPKPDSRESLAWQTATNPSVFVKLSDPPAQVSVPFMSPASAYQWFYDGYPTFGEHKQEKDLEYGACPNNMMGTFSVRTVGTSKSKYPLVVRIYMRMKHVRAWIPRPMRNQNYLFKANPNYAGNSIKPTGASRTAITT 296
                                    83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253       263       273       283       293   


Chain N from PDB  Type:PROTEIN  Length:225
                                                                                                                                                                                                                                                                 
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeee......ee........................ee..hhhhhh..ee...........hhhhhhheeee......eeeee........hhhhhhhhhhhhh....eeeeeeeeeee........eeeeeee........hhhhhhh.eeeeee......eeeeeeee.......eeeeee............eeeeeeeeee....ee............ Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4rqp N   1 GFPTELKPGTNQFLTTDDGVSAPILPNFHPTPCIHIPGEVRNLLELCQVETILEVNNVPTNATSLMERLRFPVSAQAGKGELCAVFRADPGRSGPWQSTLLGQLCGYYTQWSGSLEVTFMFTGSFMATGKMLIAYTPPGGPLPKDRATAMLGTHVIWDFGLQSSVTLVIPWISNTYTTGLVSIWYQTNYVVPIGAPNTAYIIALAAAQKNFTMQLCKDASDILQT 238
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170    || 193       203       213       223       233     
                                                                                                                                                                                                        175|                                                 
                                                                                                                                                                                                         189                                                 


Chain O from PDB  Type:PROTEIN  Length:238
                                                                                                                                                                                                                                                                              
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeee..eeeee.....eee.hhh..........................ee...eee......eeeee.......hhhhhhhhh..eee..eeeeeee......eeeeeeeeee..................hhhhhh.....ee..hhhhh....hhhhhhhh.eeeee.....eeeeee................eeeeeeeeeeee........eeeeeeeee...eee.... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4rqp O  82 VAQLTIGNSTITTQEAANIIVGYGEWPSYCSDSDATAVDKPTRPDVSVNRFYTLDTKLWEKSSKGWYWKFPDVLTETGVFGQNAQFHYLYRSGFCIHVQCNASKFHQGALLVAVLPEYVIGTVAGGTGTEDSHPPYKQTQPGADGFELQHPYVLDAGIPISQLTVCPHQWINLRTNNCATIIVPYINALPFDSALNHCNFGLLVVPISPLDYDQGATPVIPITITLAPMCSEFAGLRQ 319
                                    91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311        


Chain Q from PDB  Type:PROTEIN  Length:223
                                                                                                                                                                                                                                                               
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhh.eeeeeeeee..........eeeee.hhhhhhhhhhhhh.eeeeeeeeeeeeeee.........eeeeeee...........hhhhhh....eeeee.....eeeee........ee.............................eeeeee.........eeeeeeeeeeeeeeeee................................. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4rqp Q  74 STAETTLDSFFSRAGLVGEIDLPLEGTTNPNGYANWDIDITGYAQMRRKVELFTYMRFDAEFTFVACTPTGEVVPQLLQYMFVPPGAPKPDSRESLAWQTATNPSVFVKLSDPPAQVSVPFMSPASAYQWFYDGYPTFGEHKQEKDLEYGACPNNMMGTFSVRTVGTSKSKYPLVVRIYMRMKHVRAWIPRPMRNQNYLFKANPNYAGNSIKPTGASRTAITT 296
                                    83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253       263       273       283       293   


Chain R from PDB  Type:PROTEIN  Length:225
                                                                                                                                                                                                                                                                 
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeee......ee........................ee..hhhhhh..ee...........hhhhh.eeeee......eeeee........hhhhhhhhhhhhh....eeeeeeeeeee........eeeeeee........hhhhhhh..eeeee......eeeeeeee.......eeeeee............eeeeeeeeee....ee............ Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4rqp R   1 GFPTELKPGTNQFLTTDDGVSAPILPNFHPTPCIHIPGEVRNLLELCQVETILEVNNVPTNATSLMERLRFPVSAQAGKGELCAVFRADPGRSGPWQSTLLGQLCGYYTQWSGSLEVTFMFTGSFMATGKMLIAYTPPGGPLPKDRATAMLGTHVIWDFGLQSSVTLVIPWISNTYTTGLVSIWYQTNYVVPIGAPNTAYIIALAAAQKNFTMQLCKDASDILQT 238
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170    || 193       203       213       223       233     
                                                                                                                                                                                                        175|                                                 
                                                                                                                                                                                                         189                                                 


Chain S from PDB  Type:PROTEIN  Length:238
                                                                                                                                                                                                                                                                              
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeee..eeeee.....eee.hhh..........................ee...eee......eeeee.......hhhhhhhhh..eee..eeeeeee......eeeeeeeeee..................hhhhhh.....ee..hhhhh....hhhhhhhh.eeeee.....eeeeee................eeeeeeeeeeee........eeeeeeeee...eee.... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4rqp S  82 VAQLTIGNSTITTQEAANIIVGYGEWPSYCSDSDATAVDKPTRPDVSVNRFYTLDTKLWEKSSKGWYWKFPDVLTETGVFGQNAQFHYLYRSGFCIHVQCNASKFHQGALLVAVLPEYVIGTVAGGTGTEDSHPPYKQTQPGADGFELQHPYVLDAGIPISQLTVCPHQWINLRTNNCATIIVPYINALPFDSALNHCNFGLLVVPISPLDYDQGATPVIPITITLAPMCSEFAGLRQ 319
                                    91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4RQP)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4RQP)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4RQP)

(-) Gene Ontology  (36, 36)

Asymmetric Unit(hide GO term definitions)

 Visualization

(-) Interactive Views

Asymmetric Unit
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  Ligands, Modified Residues, Ions
(no "Ligands, Modified Residues, Ions" information available for 4rqp)
 
  Sites
(no "Sites" information available for 4rqp)
 
  Cis Peptide Bonds
    Ala C:118 - Val C:119   [ RasMol ]  
    Ala G:118 - Val G:119   [ RasMol ]  
    Ala K:118 - Val K:119   [ RasMol ]  
    Ala O:118 - Val O:119   [ RasMol ]  
    Ala S:118 - Val S:119   [ RasMol ]  
    Glu A:213 - His A:214   [ RasMol ]  
    Glu E:213 - His E:214   [ RasMol ]  
    Glu I:213 - His I:214   [ RasMol ]  
    Glu M:213 - His M:214   [ RasMol ]  
    Glu Q:213 - His Q:214   [ RasMol ]  
    Gly A:212 - Glu A:213   [ RasMol ]  
    Gly C:207 - Thr C:208   [ RasMol ]  
    Gly C:209 - Thr C:210   [ RasMol ]  
    Gly E:212 - Glu E:213   [ RasMol ]  
    Gly G:207 - Thr G:208   [ RasMol ]  
    Gly G:209 - Thr G:210   [ RasMol ]  
    Gly I:212 - Glu I:213   [ RasMol ]  
    Gly K:207 - Thr K:208   [ RasMol ]  
    Gly K:209 - Thr K:210   [ RasMol ]  
    Gly M:212 - Glu M:213   [ RasMol ]  
    Gly O:207 - Thr O:208   [ RasMol ]  
    Gly O:209 - Thr O:210   [ RasMol ]  
    Gly Q:212 - Glu Q:213   [ RasMol ]  
    Gly S:207 - Thr S:208   [ RasMol ]  
    Gly S:209 - Thr S:210   [ RasMol ]  
    Lys A:215 - Gln A:216   [ RasMol ]  
    Lys E:215 - Gln E:216   [ RasMol ]  
    Lys I:215 - Gln I:216   [ RasMol ]  
    Lys M:215 - Gln M:216   [ RasMol ]  
    Lys Q:215 - Gln Q:216   [ RasMol ]  
    Phe C:151 - Pro C:152   [ RasMol ]  
    Phe G:151 - Pro G:152   [ RasMol ]  
    Phe K:151 - Pro K:152   [ RasMol ]  
    Phe O:151 - Pro O:152   [ RasMol ]  
    Phe S:151 - Pro S:152   [ RasMol ]  
    Thr A:210 - Phe A:211   [ RasMol ]  
    Thr E:210 - Phe E:211   [ RasMol ]  
    Thr I:210 - Phe I:211   [ RasMol ]  
    Thr M:210 - Phe M:211   [ RasMol ]  
    Thr Q:210 - Phe Q:211   [ RasMol ]  
    Val C:119 - Asp C:120   [ RasMol ]  
    Val G:119 - Asp G:120   [ RasMol ]  
    Val K:119 - Asp K:120   [ RasMol ]  
    Val O:119 - Asp O:120   [ RasMol ]  
    Val S:119 - Asp S:120   [ RasMol ]  
 
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  Complete Structure
    Biological Unit 1  [ Jena3D ]

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  F6KTB0_9ENTO | F6KTB0
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/TrEMBL
        F6KTB0_9ENTO | F6KTB0: 3sjk 4rr3 4rs5 4yvs 4yvw

(-) Related Entries Specified in the PDB File

4n43 CRYSTAL STRUCTURE OF AN UNCOATING INTERMEDIATE OF A CLINICAL C4 STRAIN EV71
4n53 CRYSTAL STRUCTURE OF A CLINICAL C4 STRAIN EV71 VIRION
4rr3
4rs5