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(-) Description

Title :  CRYSTAL STRUCTURE ANALYSIS OF THE MEMBRANE TRANSPORTER FHAC
 
Authors :  T. Maier, B. Clantin, F. Gruss, F. Dewitte, A. S. Delattre, F. Jacob-Dub S. Hiller, V. Villeret
Date :  10 Jun 14  (Deposition) - 22 Oct 14  (Release) - 14 Dec 16  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.90
Chains :  Asym./Biol. Unit :  A
Keywords :  Beta Barrel, Potra Domain, Protein Transport, Outer Membrane (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  T. Maier, B. Clantin, F. Gruss, F. Dewitte, A. S. Delattre, F. Jacob-Dubuisson, S. Hiller, V. Villeret
Conserved Omp85 Lid-Lock Structure And Substrate Recognitio In Fhac
Nat Commun V. 6 7452 2015
PubMed-ID: 26058369  |  Reference-DOI: 10.1038/NCOMMS8452
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - FILAMENTOUS HEMAGGLUTININ TRANSPORTER PROTEIN FHAC
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PT7FCW
    Expression System Strain: BL21(DE3)-OMP5
    Expression System Taxid: 562
    Expression System Vector Type: PLASMID
    Gene: BP1884, FHAC
    Organism Scientific: BORDETELLA PERTUSSIS
    Organism Taxid: 257313
    Strain: TOHAMA I / ATCC BAA-589 / NCTC 13251
    Synonym: TPSB TRANSPORTER

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 1)

Asymmetric/Biological Unit (1, 1)
No.NameCountTypeFull Name
1PO41Ligand/IonPHOSPHATE ION

(-) Sites  (1, 1)

Asymmetric Unit (1, 1)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREPRO A:160 , LEU A:276 , GLY A:277 , ARG A:278 , ARG A:316BINDING SITE FOR RESIDUE PO4 A 601

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4QKY)

(-) Cis Peptide Bonds  (1, 1)

Asymmetric/Biological Unit
No.Residues
1Pro A:119 -Pro A:120

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4QKY)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4QKY)

(-) Exons   (0, 0)

(no "Exon" information available for 4QKY)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:471
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..hhhhhhhhhhhhhhhhhhhhhhhhhh........eeeeehhhhh....hhhhhh.......hhhhhhhhhhhhhhhhhhh.....eeeeeeeeee..eeeeeee..eeeeeee..ee..hhhhhhhhhhhh........hhhhhhhhhhhhh...eeeeeeeee.....eeeeeeeeee....eeeeeee........eeeeeeeeeeeee.......eeeeeeeeeee......eeeeeeeeeeeee..eeeeeeeeeeeeee..eeeeeeeeeeeeeeeeee...eeeeeeeeeeeeeeeee.....eeeeeeeeeee...eeeeeeeeeee...eeeeeeeeeeeeee..eeeeeeeeeeeee..........eee..............eee.eeeeeeeeee.....ee..eeeeeeeeeee..eeeeeeeeeeeeeeee..eeeeeeeeee...eeeeeeeee Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4qky A   6 PGARDLNRIDDRQRKEQLQRDIERALTRPPHTVTVHAVDLDFGVEGRLFDPAPLVQDYLNRPLDNEQLFLLVKALSAALYDRGYATSIVTFVPPGVVDGVLKLKVEWGRIKGWLIDGKPLEGTRDRMMVFSAMPGWQDKVLNVFDIDQAIYNINNGGKTGNITIVPADEYGYSYLDLQLQRRALPRVSLGMDNSGPGTPENGRYKYNASVTANDLLGLNDTLGLYIGNRYYRDAGHDAERNYDLMYSVPLGRTRLDLQTGYSTYRNLQSAGNSRSFGLKATRLLYRDTRSQFSVYGGLKLRQNKNYLKHYSDVTVGMQYSTQRGANAYFGDLSFTRGVSRFNGSLAWTRYMALAGQPIQWASQLGFQYSRQQLLNSYQITVGDEYTVRGYNLRTSQSGDSGVYLSNTLTVPVQASVAPFVGADVGALKSNARTIRMAGLAAGVRFDLPYARMSFTYSKPVVWLYINAGLSF 554
                                    15        25        35|       66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216       226       236       246       256       266       276       286      |304       314       324       334      |353       363       373      |402       412       422       432       442       452       462       472  ||   489       499|      512       522       532|      553 
                                                        35|                                                                                                                                                                                                                                         293|                                    341|                          380|                                                                        475|             499|                          532|          
                                                         57                                                                                                                                                                                                                                          302                                     351                           400                                                                         483              503                           544
   Legend:   → Mismatch (orange background)
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  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4QKY)

(-) CATH Domains  (0, 0 ; only for superseded entry 2QDZ: 2,3)

(no "CATH Domain" information available for 4QKY, only for superseded entry 2QDZ replaced by 4QKY)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4QKY)

(-) Gene Ontology  (9, 9)

Asymmetric/Biological Unit(hide GO term definitions)

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        FHAC_BORPE | P35077: 3njt 4ql0

(-) Related Entries Specified in the PDB File

2qdz INITIAL REFINEMENT AT 3.15 ANGSTROM RESOLUTION
4ql0