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(-) Description

Title :  THE CRYSTAL STRUCTURE OF NATIVE PATATIN
 
Authors :  S. J. Wijeyesakere, J. A. Stuckey, R. J. Richardson
Date :  17 Dec 10  (Deposition) - 01 Oct 14  (Release) - 08 Oct 14  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.96
Chains :  Asym. Unit :  A
Biol. Unit 1:  A  (1x)
Biol. Unit 2:  A  (2x)
Keywords :  Alpha/Beta Class Fold With Approximately Three Layers, Serine Hydrolase, Hydrolase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  S. J. Wijeyesakere, R. J. Richardson, J. A. Stuckey
Crystal Structure Of Patatin-17 In Complex With Aged And Non-Aged Organophosphorus Compounds.
Plos One V. 9 08245 2014
PubMed-ID: 25248161  |  Reference-DOI: 10.1371/JOURNAL.PONE.0108245

(-) Compounds

Molecule 1 - PATATIN-17
    Chains: A
    EC Number: 3.1.1.-
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PET24
    Expression System Strain: CD41
    Expression System Taxid: 562
    Expression System Vector Type: PLASMID
    Fragment: UNP RESIDUES 23-386
    Organism Common: HEARTLEAF NIGHTSHADE
    Organism Scientific: SOLANUM CARDIOPHYLLUM
    Organism Taxid: 160510

 Structural Features

(-) Chains, Units

  1
Asymmetric Unit : A
Biological Unit 1 (1x): A
Biological Unit 2 (2x): A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 4PK9)

(-) Sites  (0, 0)

(no "Site" information available for 4PK9)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4PK9)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 4PK9)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4PK9)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4PK9)

(-) Exons   (0, 0)

(no "Exon" information available for 4PK9)

(-) Sequences/Alignments

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SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:359
                                                                                                                                                                                                                                                                                                                                                                                                       
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....eeeeee..hhhhhhhhhhhhhhhhhhhhhhh.....hhhhh..eeee.hhhhhhhhhhhh.........hhhhhhhhhhhhhhhhh............hhhhhhhhhhhhh..hhhhh..eeeeeeee....eeeee.......hhhhh.hhhhhhhhhhh.......eeeeee.....eeeeeeee.hhhh...hhhhhhhhhhhhhhhhhhhhhhh..hhh.eeeeee......hhhhh.hhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhh.eeee.....hhhhhh....hhhhhhhhhhhhhhhhhheee..eeeehhhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4pk9 A  24 QLGEMVTVLSIDGGGIRGIIPATILEFLEGQLQEMDNNADARLADYFDVIGGTSTGGLLTAMISTPNENNRPFAAAKEIVPFYFEHGPQIFNPSGQILGPKYDGKYLMQVLQEKLGETRVHQALTEVVISSFDIKTNKPVIFTKSNLANSPELDAKMYDISYSTAAAPTYFPPHYFVTNTSNGDEYEFNLVDGAVATVADPALLSISVATRLAQKDPAFASIRSLNYKKMLLLSLGTGTTSEFDKTYTAKEAATWTAVHWMLVIQKMTDAASSYMTDYYLSTAFQALDSKNNYLRVQENALTGTTTEMDDASEANMELLVQVGENLLKKPVSEDNPETYEEALKRFAKLLSDRKKLRAN 382
                                    33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253       263       273       283       293       303       313       323       333       343       353       363       373
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4PK9)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4PK9)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4PK9)

(-) Gene Ontology  (7, 7)

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  4pk9
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  PAT17_SOLCD | Q8LPW4
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        PAT17_SOLCD | Q8LPW4: 1oxw 4pka 4pkb

(-) Related Entries Specified in the PDB File

1oxw CRYSTAL STRUCTURE OF SEMET PATATIN-17
4pka
4pkb