4NR5 - JenaLib

Title :   CRYSTAL STRUCTURE OF THE BROMODOMAIN OF HUMAN CREBBP IN COMPLEX WITH AN ISOXAZOLYL-BENZIMIDAZOLE LIGAND

Authors :   P. Filippakopoulos, S. Picaud, I. Felletar, D. Hay, O. Fedorov, S. Mart A. W. Pike, F. Von Delft, P. Brennan, C. H. Arrowsmith, A. M. Edwards, C S. Knapp, Structural Genomics Consortium (Sgc)

Date :   26 Nov 13 (Deposition) - 18 Dec 13 (Release) - 18 Dec 13 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   1.66

Chains :   Asym./Biol. Unit : A

Keywords :   Structural Genomics Consortium, Sgc, Chemical Tool, Small Molecule Inhibitor, Transcription, Transcription-Inhibitor Complex (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   P. Filippakopoulos, S. Picaud, I. Felletar, D. Hay, O. Fedorov, S. Martin, A. W. Pike, F. Von Delft, P. Brennan, C. H. Arrowsmith, A. M. Edwards, C. Bountra, S. Knapp
Crystal Structure Of The Bromodomain Of Human Crebbp In Complex With An Isoxazolyl-Benzimidazole Ligand
To Be Published
PubMed: search

Compounds

Molecule 1 - CREB-BINDING PROTEIN
	Chains	:	A
	EC Number	:	2.3.1.48
	Engineered	:	YES
	Expression System	:	ESCHERICHIA COLI
	Expression System Plasmid	:	PNIC28-BSA4
	Expression System Strain	:	BL21(DE3)-R3
	Expression System Taxid	:	469008
	Expression System Vector Type	:	PLASMID
	Fragment	:	UNP RESIDUES 1081-1197
	Gene	:	CBP, CREBBP
	Organism Common	:	HUMAN
	Organism Scientific	:	HOMO SAPIENS
	Organism Taxid	:	9606

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (3, 3)

Sites (3, 3)

Asymmetric Unit (3, 3)

No.	Name	Evidence	Residues	Description
1	AC1	SOFTWARE	PRO A:1110 , VAL A:1115 , LEU A:1119 , LEU A:1120 , TRP A:1158 , TRP A:1165 , ASN A:1168 , LYS A:1170 , VAL A:1174 , TYR A:1175 , NO3 A:1202 , EDO A:1203 , HOH A:1309	BINDING SITE FOR RESIDUE 2LL A 1201
2	AC2	SOFTWARE	LEU A:1109 , PRO A:1110 , ARG A:1173 , 2LL A:1201 , HOH A:1353	BINDING SITE FOR RESIDUE NO3 A 1202
3	AC3	SOFTWARE	TYR A:1175 , 2LL A:1201 , HOH A:1347	BINDING SITE FOR RESIDUE EDO A 1203

SS Bonds (0, 0)

Cis Peptide Bonds (1, 1)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (0, 0)

PROSITE Motifs (0, 0)

Exons (0, 0)

Sequences/Alignments

Asymmetric/Biological Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
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	UniProt sequence: complete aligned part

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Chain A from PDB  Type:PROTEIN  Length:113
                                                                                                                                                  
               SCOP domains d4nr5a_ A: automated matches                                                                                      SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...hhhhhhhhhhhhhhhhhh....hhhhh...hhhhhh..hhhhhh....hhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------- Transcript
                4nr5 A 1083 KIFKPEELRQALMPTLEALYRQDPESLPFRQPVDPQLLGIPDYFDIVKNPMDLSTIKRKLDTGQYQEPWQYVDDVWLMFNNAWLYNRKTSRVYKFCSKLAEVFEQEIDPVMQS 1195
                                  1092      1102      1112      1122      1132      1142      1152      1162      1172      1182      1192

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	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

Classification and Annotation

SCOP Domains (1, 1)

CATH Domains (0, 0)

Pfam Domains (0, 0)

Gene Ontology (66, 66)

Visualization

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	Cis Peptide Bonds
		Asp A:1105 - Pro A:1106	[ RasMol ]

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Description