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Title :   CRYSTAL STRUCTURE OF A BILE-ACID 7-ALPHA DEHYDRATASE (CLOHIR_00079) FROM CLOSTRIDIUM HIRANONIS DSM 13275 AT 1.89 A RESOLUTION WITH PRODUCT ADDED

Authors :   Joint Center For Structural Genomics (Jcsg)

Date :   07 Oct 13 (Deposition) - 04 Dec 13 (Release) - 04 Dec 13 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   1.89

Chains :   Asym. Unit : A,B
Biol. Unit 1: A  (3x)
Biol. Unit 2: B  (3x)

Keywords :   Snoal-Like Domain, Pf13577 Family, Structural Genomics, Joint Center For Structural Genomics, Jcsg, Protein Structure Initiative, Psi- Biology, Lyase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   Joint Center For Structural Genomics (Jcsg)
Crystal Structure Of A Bile-Acid 7-Alpha Dehydratase (Clohir_00079) From Clostridium Hiranonis Dsm 13275 At 1. 89 A Resolution With Product Added
To Be Published
PubMed: search

Molecule 1 - BILE ACID 7-ALPHA DEHYDRATASE, BAIE
	Chains	:	A, B
	EC Number	:	4.2.1.106
	Engineered	:	YES
	Expression System	:	ESCHERICHIA COLI
	Expression System Plasmid	:	SPEEDET
	Expression System Strain	:	PB1
	Expression System Taxid	:	562
	Expression System Vector Type	:	PLASMID
	Gene	:	BAIE, CLOHIR_00079
	Organism Scientific	:	CLOSTRIDIUM HIRANONIS
	Organism Taxid	:	500633
	Strain	:	DSM 13275
	Synonym	:	BILE ACID 7A-DEHYDRATASE

		1	2
Asymmetric Unit	:	A	B
Biological Unit 1 (3x)	:	A
Biological Unit 2 (3x)	:		B

Summary Information (see also Sequences/Alignments below)

Asymmetric Unit (6, 10)

No.	Name	Count	Type	Full Name
1	1PE	1	Ligand/Ion	PENTAETHYLENE GLYCOL
2	CIT	2	Ligand/Ion	CITRIC ACID
3	EDO	1	Ligand/Ion	1,2-ETHANEDIOL
4	NA	2	Ligand/Ion	SODIUM ION
5	UNL	2	Ligand/Ion	UNKNOWN LIGAND
6	ZN	2	Ligand/Ion	ZINC ION

Biological Unit 1 (4, 12)

No.	Name	Count	Type	Full Name
1	1PE	3	Ligand/Ion	PENTAETHYLENE GLYCOL
2	CIT	3	Ligand/Ion	CITRIC ACID
3	EDO	3	Ligand/Ion	1,2-ETHANEDIOL
4	NA	-1	Ligand/Ion	SODIUM ION
5	UNL	3	Ligand/Ion	UNKNOWN LIGAND
6	ZN	-1	Ligand/Ion	ZINC ION

Biological Unit 2 (2, 6)

No.	Name	Count	Type	Full Name
1	1PE	-1	Ligand/Ion	PENTAETHYLENE GLYCOL
2	CIT	3	Ligand/Ion	CITRIC ACID
3	EDO	-1	Ligand/Ion	1,2-ETHANEDIOL
4	NA	-1	Ligand/Ion	SODIUM ION
5	UNL	3	Ligand/Ion	UNKNOWN LIGAND
6	ZN	-1	Ligand/Ion	ZINC ION

Asymmetric Unit (8, 8)

No.	Name	Evidence	Residues	Description
1	AC1	SOFTWARE	HIS A:86 , HOH A:301	BINDING SITE FOR RESIDUE ZN A 201
2	AC2	SOFTWARE	GLU A:105 , HOH A:317	BINDING SITE FOR RESIDUE NA A 202
3	AC3	SOFTWARE	LYS A:24 , THR A:87 , PRO A:88 , HOH A:303 , HOH A:311	BINDING SITE FOR RESIDUE CIT A 203
4	AC4	SOFTWARE	ARG A:32 , LEU A:38 , PHE A:125 , HOH A:363	BINDING SITE FOR RESIDUE EDO A 205
5	AC5	SOFTWARE	VAL A:60 , HIS A:62 , GLU A:66	BINDING SITE FOR RESIDUE 1PE A 206
6	AC6	SOFTWARE	HIS B:86 , HOH B:301	BINDING SITE FOR RESIDUE ZN B 201
7	AC7	SOFTWARE	GLU B:105 , HOH B:323	BINDING SITE FOR RESIDUE NA B 202
8	AC8	SOFTWARE	LYS B:24 , THR B:87 , PRO B:88 , HOH B:305 , HOH B:307	BINDING SITE FOR RESIDUE CIT B 203

(no "SS Bond" information available for 4N3V)

(no "Cis Peptide Bond" information available for 4N3V)

(no "SAP(SNP)/Variant" information available for 4N3V)

(no "PROSITE Motif" information available for 4N3V)

(no "Exon" information available for 4N3V)

Asymmetric Unit

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Chain A from PDB  Type:PROTEIN  Length:167
                                                                                                                                                                                                       
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..................hhhhhhhhhhhhh...eeeeeeeeeeeeeeee..eeeeeeeeeeeeee.hhhhh.eeeeeeeeeeeeeeee..eeeeeeeeeeeeeeeeee............. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4n3v A   0 GMTLEARIEALEKEIQRLNDIEAIKQLKAKYFRCLDGKLWDELETTLSPNIETSYSDGKLVFHSPKEVTEYLAAAMPKEEISMHMGHTPEITIDSENTATGRWYLEDNLIFTDGKYKNVGINGGAFYTDKYEKIDGQWYIKETGYVRIFEEHFMRDPKIHITSNMHK 166
                                     9        19        29        39        49        59        69        79        89        99       109       119       129       139       149       159

Chain B from PDB  Type:PROTEIN  Length:167
                                                                                                                                                                                                       
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..................hhhhhhhhhhhhh...eeeeeeeeeeeeeeee..eeeeeeeeeeeeee.hhhhh.eeeeeeeeeeeeeeee..eeeeeeeeeeeeeeeeee............. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4n3v B   0 GMTLEARIEALEKEIQRLNDIEAIKQLKAKYFRCLDGKLWDELETTLSPNIETSYSDGKLVFHSPKEVTEYLAAAMPKEEISMHMGHTPEITIDSENTATGRWYLEDNLIFTDGKYKNVGINGGAFYTDKYEKIDGQWYIKETGYVRIFEEHFMRDPKIHITSNMHK 166
                                     9        19        29        39        49        59        69        79        89        99       109       119       129       139       149       159

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	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

(no "SCOP Domain" information available for 4N3V)

(no "CATH Domain" information available for 4N3V)

(no "Pfam Domain" information available for 4N3V)

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	Ligands, Modified Residues, Ions
		1PE	[ RasMol \| Jena3D ]	+environment [ RasMol \| Jena3D ]
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	Q9RB47_9FIRM \| Q9RB47	:	4l8p

4l8o	CRYSTAL STRUCTURE OF A BILE-ACID 7-ALPHA DEHYDRATASE (CLOHYLEM_06634) FROM CLOSTRIDIUM HYLEMONAE DSM 15053 AT 2.20 A RESOLUTION - ORTHOLOG STRUCTURE
4l8p	CRYSTAL STRUCTURE OF A BILE-ACID 7-ALPHA DEHYDRATASE (CLOHIR_00079) FROM CLOSTRIDIUM HIRANONIS DSM 13275 AT 1.60 A RESOLUTION - SEMET STRUCTURE WITHOUT PRODUCT ADDED
4leh	CRYSTAL STRUCTURE OF A BILE-ACID 7-ALPHA DEHYDRATASE (CLOSCI_03134) FROM CLOSTRIDIUM SCINDENS ATCC 35704 AT 2.90 A RESOLUTION - ORTHOLOG STRUCTURE

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Ligands, Modified Residues, Ions (6, 10)

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