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(-) Description

Title :  ORTHORHOMBIC MONELLIN
 
Authors :  G. Bujacz, A. Wlodawer
Date :  04 Mar 97  (Deposition) - 07 Jul 97  (Release) - 24 Feb 09  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.30
Chains :  Asym. Unit :  A,B,C,D
Biol. Unit 1:  A,B  (1x)
Biol. Unit 2:  C,D  (1x)
Keywords :  Sweet-Tasting Protein, Orthorhombic Crystals (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  G. Bujacz, M. Miller, R. Harrison, N. Thanki, G. L. Gilliland, C. M. Ogata, S. H. Kim, A. Wlodawer
Structure Of Monellin Refined To 2. 3 A Resolution In The Orthorhombic Crystal Form.
Acta Crystallogr. , Sect. D V. 53 713 1997
PubMed-ID: 15299859  |  Reference-DOI: 10.1107/S0907444997006860
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - MONELLIN
    ChainsA, C
    Organism CommonSERENDIPITY BERRY
    Organism ScientificDIOSCOREOPHYLLUM CUMMINSII
    Organism Taxid3457
    Other DetailsPROTEIN EXTRACTED FROM BERRIES
 
Molecule 2 - MONELLIN
    ChainsB, D
    Organism CommonSERENDIPITY BERRY
    Organism ScientificDIOSCOREOPHYLLUM CUMMINSII
    Organism Taxid3457
    Other DetailsPROTEIN EXTRACTED FROM BERRIES

 Structural Features

(-) Chains, Units

  1234
Asymmetric Unit ABCD
Biological Unit 1 (1x)AB  
Biological Unit 2 (1x)  CD

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 4MON)

(-) Sites  (0, 0)

(no "Site" information available for 4MON)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4MON)

(-) Cis Peptide Bonds  (4, 4)

Asymmetric Unit
No.Residues
1Gly A:40 -Pro A:41
2Arg B:39 -Pro B:40
3Gly C:40 -Pro C:41
4Arg D:39 -Pro D:40

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4MON)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4MON)

(-) Exons   (0, 0)

(no "Exon" information available for 4MON)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it)
Chain A from PDB  Type:PROTEIN  Length:44
                                                                           
               SCOP domains d4mon.3 B:,A:                                SCOP domains
               CATH domains -------------------------------------------- CATH domains
               Pfam domains -------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeeee..eee..eeeeeeeeee.........eee...... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------- PROSITE
                 Transcript -------------------------------------------- Transcript
                  4mon A  2 REIKGYEYQLYVYASDKLFRADISEDYKTRGRKLLRFNGPVPPP 45
                                    11        21        31        41    

Chain B from PDB  Type:PROTEIN  Length:50
                                                                                 
               SCOP domains d4mon.3 B:,A: Monellin, B & A chains together      SCOP domains
               CATH domains -------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------- Pfam domains
         Sec.struct. author .eeeee...hhhhhhhhhhhhh...........eeee...eeeeeee... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------- Transcript
                  4mon B  1 GEWEIIDIGPFTQNLGKFAVDEENKIGQYGRLTFNKVIRPCMKKTIYENE 50
                                    10        20        30        40        50

Chain C from PDB  Type:PROTEIN  Length:44
                                                                           
               SCOP domains d4mon.4 D:,C:                                SCOP domains
               CATH domains -------------------------------------------- CATH domains
               Pfam domains -------------------------------------------- Pfam domains
         Sec.struct. author ....eeeeeeeeee..eeeeeeeeee.....eeeeeee...... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------- PROSITE
                 Transcript -------------------------------------------- Transcript
                  4mon C  2 REIKGYEYQLYVYASDKLFRADISEDYKTRGRKLLRFNGPVPPP 45
                                    11        21        31        41    

Chain D from PDB  Type:PROTEIN  Length:50
                                                                                 
               SCOP domains d4mon.4 D:,C: Monellin, B & A chains together      SCOP domains
               CATH domains -------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------- Pfam domains
         Sec.struct. author .eeeee...hhhhhhhhhhhhhhhhh.......eeee...eeeee..... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------- Transcript
                  4mon D  1 GEWEIIDIGPFTQNLGKFAVDEENKIGQYGRLTFNKVIRPCMKKTIYENE 50
                                    10        20        30        40        50

   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 2)

Asymmetric Unit

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4MON)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4MON)

(-) Gene Ontology  (0, 0)

Asymmetric Unit(hide GO term definitions)
    (no "Gene Ontology" information available for 4MON)

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(no "Sites" information available for 4mon)
 
  Cis Peptide Bonds
    Arg B:39 - Pro B:40   [ RasMol ]  
    Arg D:39 - Pro D:40   [ RasMol ]  
    Gly A:40 - Pro A:41   [ RasMol ]  
    Gly C:40 - Pro C:41   [ RasMol ]  
 
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        MONA_DIOCU | P028811fa3 1fuw 1iv7 1iv9 1krl 1m9g 1mnl 2gpk 2o9u 3mon 3pxm 3pyj 3q2p 5lc6 5lc7
        MONB_DIOCU | P028821fa3 1fuw 1iv7 1iv9 1krl 1m9g 1mnl 1mol 2o9u 3mon 3pxm 3pyj 3q2p 5lc6 5lc7

(-) Related Entries Specified in the PDB File

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