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(-) Description

Title :  CRYSTAL STRUCTURE OF THE DOUBLE MUTANT (S112A, H303A) OF B.ANTHRACIS MYCROCINE IMMUNITY PROTEIN (MCCF)
 
Authors :  B. Nocek, A. Joachimiak, Center For Structural Genomics Of Infec Diseases (Csgid)
Date :  04 Sep 13  (Deposition) - 02 Oct 13  (Release) - 02 Oct 13  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.40
Chains :  Asym./Biol. Unit :  A,B
Keywords :  Mccf, Serine Peptidase S66, Microcine Immunity Protein, Structural Genomics, Niaid, National Institute Of Allergy And Infectious Diseases, Center For Structural Genomics Of Infectious Diseases, Csgid, Serine Peptidase, Immune System (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  B. Nocek, W. F. Anderson, K. Severinov, A. Joachimiak
Crystal Structure Of The Double Mutant (S112A, H303A) Of B. Anthracis Mycrocine Immunity Protein (Mccf)
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - MICROCIN IMMUNITY PROTEIN MCCF
    Chains: A, B
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Gene: BA_1949, BAS1809, GBAA_1949
    Mutation: YES
    Organism Common: ANTHRAX,ANTHRAX BACTERIUM
    Organism Scientific: BACILLUS ANTHRACIS
    Organism Taxid: 198094
    Strain: AMES

 Structural Features

(-) Chains, Units

  12
Asymmetric/Biological Unit : AB

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 3)

Asymmetric/Biological Unit (2, 3)
No.NameCountTypeFull Name
1EDO1Ligand/Ion1,2-ETHANEDIOL
2GOL2Ligand/IonGLYCEROL

(-) Sites  (3, 3)

Asymmetric Unit (3, 3)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREPRO A:164 , HIS A:326 , HOH A:764 , HOH A:950 , HOH A:993 , TYR B:9 , HOH B:914 , HOH B:1042BINDING SITE FOR RESIDUE GOL A 601
2AC2SOFTWARETYR A:111 , PRO A:137 , SER A:138 , ALA A:303 , HIS A:305 , MET A:307 , HOH A:1121 , HOH A:1122BINDING SITE FOR RESIDUE EDO A 602
3AC3SOFTWAREARG A:246 , GLY B:86 , MET B:87 , ASN B:210 , ASN B:212 , THR B:213 , LYS B:239 , HOH B:710 , HOH B:734 , HOH B:766 , HOH B:1020BINDING SITE FOR RESIDUE GOL B 601

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4MJX)

(-) Cis Peptide Bonds  (6, 6)

Asymmetric/Biological Unit
No.Residues
1Glu A:143 -Pro A:144
2Leu A:163 -Pro A:164
3His A:305 -Pro A:306
4Glu B:143 -Pro B:144
5Leu B:163 -Pro B:164
6His B:305 -Pro B:306

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4MJX)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4MJX)

(-) Exons   (0, 0)

(no "Exon" information available for 4MJX)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:333
                                                                                                                                                                                                                                                                                                                                                                             
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...........eeeee....hhhhhhhhhhhhhhhhhhhhh.eeee.............hhhhhhhhhhhhhh...eeeeee.....hhhhhhhhhhhhhhhhh..eeeehhhhhhhhhhhhhhhh..eee..hhhhhhh...hhhhhhhhhhhhhhh......ee.....ee................ee...eeee..eeeeeeeeeehhhhh...............eeeee....hhhhhhhhhhhhhhhhhhhhh.eeeee............hhhhhhhhhhh.....eeeee..........eee..eeeee....eeee...... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4mjx A   1 MPLPKSLKYGDTIGIYSPSSPVTYTSPKRFERAKSYLLQKGFHILEGSLTGRYDYYRSGSIQERAKELNALIRNPNVSCIMSTIGGMNSNSLLPYIDYDAFQNNPKIMIGYADATALLLGIYAKTGIPTFYGPALVPSFGEFEPFVDDTYKYFLETLLHDQALPYNIKQPLFWSDEFINWEEKTKEKELRPNNWISVTNGQATGRVIGGNLNTIQGIWGSPYMPCIQEGDILFIEDSSKDAATIERSFSFLKINGVFDKVSGIILGKHEQFDDCGTNRKPYEILLEVLQNQRIPLLADFDCCATHPMITMPIGVQVKMDATNKTIHILEKWKI 333
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330   


Chain B from PDB  Type:PROTEIN  Length:336
                                                                                                                                                                                                                                                                                                                                                                                
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ..............eeeee....hhhhhhhhhhhhhhhhhhhh..eeee.............hhhhhhhhhhhhhh...eeeeee.....hhhhhhhhhhhhhhhhh..eeeehhhhhhhhhhhhhhhh..eee..hhhhhhh...hhhhhhhhhhhhhhh......ee.....ee................ee...eeee..eeeeeeeeeehhhhh...............eeeee....hhhhhhhhhhhhhhhhhhhhh.eeeee............hhhhhhhhhhh.....eeeee..........eee..eeeee....eeee...... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 4mjx B  -2 SNAMPLPKSLKYGDTIGIYSPSSPVTYTSPKRFERAKSYLLQKGFHILEGSLTGRYDYYRSGSIQERAKELNALIRNPNVSCIMSTIGGMNSNSLLPYIDYDAFQNNPKIMIGYADATALLLGIYAKTGIPTFYGPALVPSFGEFEPFVDDTYKYFLETLLHDQALPYNIKQPLFWSDEFINWEEKTKEKELRPNNWISVTNGQATGRVIGGNLNTIQGIWGSPYMPCIQEGDILFIEDSSKDAATIERSFSFLKINGVFDKVSGIILGKHEQFDDCGTNRKPYEILLEVLQNQRIPLLADFDCCATHPMITMPIGVQVKMDATNKTIHILEKWKI 333
                                     7        17        27        37        47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327
   Legend:   → Mismatch (orange background)
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    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4MJX)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4MJX)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4MJX)

(-) Gene Ontology  (3, 3)

Asymmetric/Biological Unit(hide GO term definitions)

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  Cis Peptide Bonds
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    Leu A:163 - Pro A:164   [ RasMol ]  
    Leu B:163 - Pro B:164   [ RasMol ]  
 

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/TrEMBL
        Q81RT8_BACAN | Q81RT8: 3gjz 3sr3 3t5m 3tyx 3u1b 4jvo 4mi1 5k99

(-) Related Entries Specified in the PDB File

3gjz
4jvo
4mi1 RELATED ID: CSGID-IDP00038 RELATED DB: TARGETTRACK