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(-) Description

Title :  CRYSTAL STRUCTURE OF THE DOUBLE MUTANT (S112A, H303A) OF B.ANTHRACIS MYCROCINE IMMUNITY PROTEIN (MCCF) WITH ASPARTYL SULFAMOYL ADENYLATES
 
Authors :  B. Nocek, K. Severinov, W. F. Anderson, A. Joachimiak, Center For Str Genomics Of Infectious Diseases (Csgid)
Date :  30 Aug 13  (Deposition) - 23 Apr 14  (Release) - 23 Apr 14  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.40
Chains :  Asym./Biol. Unit :  A,B
Keywords :  Csgid, Mccf, Structural Genomics, Niaid, National Institute Of Allergy And Infectious Diseases, Center For Structural Genomics Of Infectious Diseases, Microcine Immunity Protein, Serine Peptidase S66, Immune System (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  B. Nocek, K. Severinov, W. F. Anderson, A. Joachimiak
Crystal Structure Of The Double Mutant (S112A, H303A) Of B. Anthracis Mycrocine Immunity Protein (Mccf) With Aspartyl Sulfamoyl Adenylates
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - MICROCIN IMMUNITY PROTEIN MCCF
    Chains: A, B
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Strain: BL21(DE3)
    Expression System Taxid: 469008
    Gene: BA_1949, BAS1809, GBAA_1949
    Mutation: YES
    Organism Common: ANTHRAX,ANTHRAX BACTERIUM
    Organism Scientific: BACILLUS ANTHRACIS
    Organism Taxid: 198094
    Strain: AMES

 Structural Features

(-) Chains, Units

  12
Asymmetric/Biological Unit : AB

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (3, 20)

Asymmetric/Biological Unit (3, 20)
No.NameCountTypeFull Name
1DSZ2Ligand/Ion5'-O-(L-ALPHA-ASPARTYLSULFAMOYL)ADENOSINE
2MSE15Mod. Amino AcidSELENOMETHIONINE
3SO43Ligand/IonSULFATE ION

(-) Sites  (5, 5)

Asymmetric Unit (5, 5)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREILE A:84 , GLY A:85 , GLY A:86 , TYR A:111 , ALA A:112 , ASP A:113 , PRO A:137 , PHE A:177 , TRP A:180 , ASN A:210 , ASN A:212 , THR A:213 , LYS A:239 , GLU A:269 , ALA A:303 , HOH A:618 , HOH A:649 , HOH A:696 , HOH A:699 , HOH A:717 , HOH A:736 , HOH A:737 , HOH A:738 , ARG B:246BINDING SITE FOR RESIDUE DSZ A 401
2AC2SOFTWAREARG A:246 , ILE B:84 , GLY B:85 , GLY B:86 , TYR B:111 , ALA B:112 , ASP B:113 , PHE B:177 , TRP B:180 , ASN B:210 , ASN B:212 , THR B:213 , LYS B:239 , GLU B:269 , ALA B:303 , HOH B:509 , HOH B:561 , HOH B:599 , HOH B:610 , HOH B:649 , HOH B:651 , HOH B:653 , HOH B:692BINDING SITE FOR RESIDUE DSZ B 401
3AC3SOFTWARESER B:-2 , ASN B:166 , LYS B:168 , GLN B:169 , HOH B:570 , HOH B:612 , HOH B:657BINDING SITE FOR RESIDUE SO4 B 402
4AC4SOFTWAREGLU B:176 , PHE B:177 , GLN B:270 , HOH B:620BINDING SITE FOR RESIDUE SO4 B 403
5AC5SOFTWARELYS A:168 , ASN B:199 , GLN B:201 , THR B:321 , HOH B:708BINDING SITE FOR RESIDUE SO4 B 404

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4MI1)

(-) Cis Peptide Bonds  (6, 6)

Asymmetric/Biological Unit
No.Residues
1Glu A:143 -Pro A:144
2Leu A:163 -Pro A:164
3His A:305 -Pro A:306
4Glu B:143 -Pro B:144
5Leu B:163 -Pro B:164
6His B:305 -Pro B:306

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4MI1)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4MI1)

(-) Exons   (0, 0)

(no "Exon" information available for 4MI1)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:332
                                                                                                                                                                                                                                                                                                                                                                            
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..........eeeee....hhhhhhhhhhhhhhhhhhhhh.eeee.............hhhhhhhhhhhhhh...eeeeee.....hhhhhhhhhhhhhhhhh..eeeehhhhhhhhhhhhhhhh..eee..hhhhhhh...hhhhhhhhhhhhhhh......eee....ee................ee...eeee..eeeeeeeeeehhhhh...............eeeee....hhhhhhhhhhhhhhhhhhhhh.eeeee............hhhhhhhhhhh.....eeeee..........eee..eeeee....eeee...... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4mi1 A   2 PLPKSLKYGDTIGIYSPSSPVTYTSPKRFERAKSYLLQKGFHILEGSLTGRYDYYRSGSIQERAKELNALIRNPNVSCImSTIGGmNSNSLLPYIDYDAFQNNPKImIGYADATALLLGIYAKTGIPTFYGPALVPSFGEFEPFVDDTYKYFLETLLHDQALPYNIKQPLFWSDEFINWEEKTKEKELRPNNWISVTNGQATGRVIGGNLNTIQGIWGSPYmPCIQEGDILFIEDSSKDAATIERSFSFLKINGVFDKVSGIILGKHEQFDDCGTNRKPYEILLEVLQNQRIPLLADFDCCATHPmITmPIGVQVKmDATNKTIHILEKWKI 333
                                    11        21        31        41        51        61        71        81     |  91       101      |111       121       131       141       151       161       171       181       191       201       211       221 |     231       241       251       261       271       281       291       301     | 311      |321       331  
                                                                                                          81-MSE |                  108-MSE                                                                                                            223-MSE                                                                             307-MSE    318-MSE           
                                                                                                                87-MSE                                                                                                                                                                                                                        310-MSE                   


Chain B from PDB  Type:PROTEIN  Length:336
                                                                                                                                                                                                                                                                                                                                                                                
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ..............eeeee....hhhhhhhhhhhhhhhhhhhh..eeee.............hhhhhhhhhhhhhh...eeeeee.....hhhhhhhhhhhhhhhhh..eeeehhhhhhhhhhhhhhhh..eee..hhhhhhh...hhhhhhhhhhhhhhh......ee.....ee................ee...eeee..eeeeeeeeeehhhhh...............eeeee....hhhhhhhhhhhhhhhhhhhhh.eeeee............hhhhhhhhhhh.....eeeee..........eee..eeeee....eeee...... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 4mi1 B  -2 SNAmPLPKSLKYGDTIGIYSPSSPVTYTSPKRFERAKSYLLQKGFHILEGSLTGRYDYYRSGSIQERAKELNALIRNPNVSCImSTIGGmNSNSLLPYIDYDAFQNNPKImIGYADATALLLGIYAKTGIPTFYGPALVPSFGEFEPFVDDTYKYFLETLLHDQALPYNIKQPLFWSDEFINWEEKTKEKELRPNNWISVTNGQATGRVIGGNLNTIQGIWGSPYmPCIQEGDILFIEDSSKDAATIERSFSFLKINGVFDKVSGIILGKHEQFDDCGTNRKPYEILLEVLQNQRIPLLADFDCCATHPmITmPIGVQVKmDATNKTIHILEKWKI 333
                               |     7        17        27        37        47        57        67        77   |    87        97       107|      117       127       137       147       157       167       177       187       197       207       217     | 227       237       247       257       267       277       287       297       307  |    317|      327      
                               1-MSE                                                                          81-MSE |                  108-MSE                                                                                                            223-MSE                                                                             307-MSE    318-MSE           
                                                                                                                    87-MSE                                                                                                                                                                                                                        310-MSE
   Legend:   → Mismatch (orange background)
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  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4MI1)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4MI1)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4MI1)

(-) Gene Ontology  (3, 3)

Asymmetric/Biological Unit(hide GO term definitions)

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  Cis Peptide Bonds
    Glu A:143 - Pro A:144   [ RasMol ]  
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    His B:305 - Pro B:306   [ RasMol ]  
    Leu A:163 - Pro A:164   [ RasMol ]  
    Leu B:163 - Pro B:164   [ RasMol ]  
 

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/TrEMBL
        Q81RT8_BACAN | Q81RT8: 3gjz 3sr3 3t5m 3tyx 3u1b 4jvo 4mjx 5k99

(-) Related Entries Specified in the PDB File

3gjz
4jvo RELATED ID: CSGID-IDP00038 RELATED DB: TARGETTRACK
4mjx