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(-) Description

Title :  THE CRYSTAL STRUCTURE OF PHOSPHORIBOSYLAMINOIMIDAZOLE CARBOXYLASE ATPASE SUBUNIT OF FRANCISELLA TULARENSIS SUBSP. TULARENSIS SCHU S4 IN COMPLEX WITH PARTIALLY HYDROLYSED ATP
 
Authors :  K. Tan, M. Zhou, K. Kwon, W. F. Anderson, A. Joachimiak, Center For Str Genomics Of Infectious Diseases (Csgid)
Date :  15 Aug 13  (Deposition) - 28 Aug 13  (Release) - 28 Aug 13  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.98
Chains :  Asym. Unit :  A
Biol. Unit 1:  A  (2x)
Keywords :  Structural Genomics, The Center For Structural Genomics Of Infectious Diseases, Csgid, Niaid, National Institute Of Allergy And Infectious Diseases, Lyase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  K. Tan, M. Zhou, K. Kwon, W. F. Anderson, A. Joachimiak
The Crystal Structure Of Phosphoribosylaminoimidazole Carboxylase Atpase Subunit Of Francisella Tularensis Subsp. Tularensis Schu S4 In Complex With Partially Hydrolysed Atp
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - PHOSPHORIBOSYLAMINOIMIDAZOLE CARBOXYLASE, ATPASE SUBUNIT
    Chains: A
    EC Number: 4.1.1.21
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PMCSG28
    Expression System Strain: BL21(DE3)MAGIC
    Expression System Taxid: 469008
    Expression System Vector Type: PLASMID
    Gene: FTT_0897, PURK
    Organism Scientific: FRANCISELLA TULARENSIS SUBSP. TULARENSIS
    Organism Taxid: 177416
    Strain: SCHU S4

 Structural Features

(-) Chains, Units

  1
Asymmetric Unit : A
Biological Unit 1 (2x): A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (5, 9)

Asymmetric Unit (5, 9)
No.NameCountTypeFull Name
1AMP1Ligand/IonADENOSINE MONOPHOSPHATE
2GOL1Ligand/IonGLYCEROL
3MSE5Mod. Amino AcidSELENOMETHIONINE
4PEG1Ligand/IonDI(HYDROXYETHYL)ETHER
5PO41Ligand/IonPHOSPHATE ION
Biological Unit 1 (5, 18)
No.NameCountTypeFull Name
1AMP2Ligand/IonADENOSINE MONOPHOSPHATE
2GOL2Ligand/IonGLYCEROL
3MSE10Mod. Amino AcidSELENOMETHIONINE
4PEG2Ligand/IonDI(HYDROXYETHYL)ETHER
5PO42Ligand/IonPHOSPHATE ION

(-) Sites  (4, 4)

Asymmetric Unit (4, 4)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREARG A:98 , ILE A:136 , LYS A:138 , GLY A:146 , GLN A:149 , GLU A:175 , ALA A:176 , PHE A:177 , VAL A:178 , GLU A:183 , HIS A:206 , GLU A:259 , PO4 A:402 , HOH A:659BINDING SITE FOR RESIDUE AMP A 401
2AC2SOFTWAREASP A:145 , GLU A:247 , GLU A:259 , AMP A:401 , HOH A:526 , HOH A:659BINDING SITE FOR RESIDUE PO4 A 402
3AC3SOFTWAREILE A:272 , ALA A:275 , THR A:277 , SER A:278 , GLU A:281 , HOH A:600BINDING SITE FOR RESIDUE GOL A 403
4AC4SOFTWAREGLU A:215 , LYS A:299BINDING SITE FOR RESIDUE PEG A 404

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4MA0)

(-) Cis Peptide Bonds  (3, 3)

Asymmetric Unit
No.Residues
1Tyr A:86 -Pro A:87
2Leu A:133 -Pro A:134
3Ala A:216 -Pro A:217

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4MA0)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4MA0)

(-) Exons   (0, 0)

(no "Exon" information available for 4MA0)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
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  UniProt sequence: complete  aligned part    
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SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:366
                                                                                                                                                                                                                                                                                                                                                                                                              
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .eeeee..hhhhhhhhhhhhhhh.eeeee......hhhhh.eee.....hhhhhhhhhh...eeee.....hhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhh......eeee.hhhhhhhhhhhhh..eeeee.........eeee.hhhhhhhhhhhhh.....eeeee.....eeeeeeeee.....eee...eeeeee..eeeeeee...hhhhhhhhhhhhhhhhhhh...eeeeeeeeee..eeeeeeee...hhhhhhhhhhh..hhhhhhhhhhh...........eeeeeee....hhhhhhh....eeee.........eeeeeeee..hhhhhhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 4ma0 A   1 mKIGIIGAGQLARmLSLAGTPLGLEFHCLGKNGDCAEEVVKTVTDIELTKVNDVVAWAKQFDVITFENENISHELIKAINHEVSVYPSAKAIAISQDRLLEKSFmQDHGIATAKFVNIDSLAKLQSAVDDHGLPAILKTRRFGYDGKGQFVIRSQEDITKAWDVLKDAPDGLIYEAFVDFDYEVSQICTADLKGNIAFYPLARNTHKQGIIVESEAPFENVVLAEKAQQIAKILVKEFAYVGTLAIEFFVKGDELIVNEIAPRVHNSGHWSIDGAVTSQFENHVRAIAGLILGDTTSRKTVmLNCIGGmPATKDLAALDRVKIHSYNKEPRKGRKVGHLNLNLNDETDEYQLLQVKKLIALSEEIA 366
                            |       10   |    20        30        40        50        60        70        80        90       100    |  110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300 |     310       320       330       340       350       360      
                            |           14-MSE                                                                                    105-MSE                                                                                                                                                                                              302-MSE  |                                                         
                            1-MSE                                                                                                                                                                                                                                                                                                             309-MSE
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4MA0)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4MA0)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4MA0)

(-) Gene Ontology  (10, 10)

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 Related Entries

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        Q5NGE8_FRATT | Q5NGE8: 4m9u 4ma5 4mam 5jqw

(-) Related Entries Specified in the PDB File

4m9u APO FORM RELATED ID: CSGID-IDP04645 RELATED DB: TARGETTRACK
4ma5
4mam