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(-) Description

Title :  CRYSTAL STRUCTURE OF MURINE CYCLOOXYGENASE-2 COMPLEX WITH MELOXICAM
 
Authors :  S. Xu, S. Banerjee, D. J. Hermanson, L. J. Marnett
Date :  02 Aug 13  (Deposition) - 22 Jan 14  (Release) - 14 May 14  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.45
Chains :  Asym. Unit :  A,B,C,D
Biol. Unit 1:  A,B  (1x)
Biol. Unit 2:  C,D  (1x)
Keywords :  Nsaid, Cox, Dioxygenase, Peroxidase, Glycosylation, Oxidoreductase- Oxidoreductase Inhibitor Complex (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  S. Xu, D. J. Hermanson, S. Banerjee, K. Ghebreselasie, G. M. Clayton, R. M. Garavito, L. J. Marnett
Oxicams Bind In A Novel Mode To The Cyclooxygenase Active Site Via A Two-Water-Mediated H-Bonding Network.
J. Biol. Chem. V. 289 6799 2014
PubMed-ID: 24425867  |  Reference-DOI: 10.1074/JBC.M113.517987

(-) Compounds

Molecule 1 - PROSTAGLANDIN G/H SYNTHASE 2
    Chains: A, B, C, D
    EC Number: 1.14.99.1
    Engineered: YES
    Expression System: SPODOPTERA FRUGIPERDA
    Expression System Plasmid: PVL1393
    Expression System Strain: SF21
    Expression System Taxid: 7108
    Expression System Vector Type: BACULOVIRUS
    Fragment: UNP RESIDUES 18-569
    Gene: PTGS2, COX-2, COX2, PGHS-B, TIS10
    Organism Common: MOUSE
    Organism Scientific: MUS MUSCULUS
    Organism Taxid: 10090
    Synonym: CYCLOOXYGENASE-2, COX-2, GLUCOCORTICOID-REGULATED INFLAMMATORY CYCLOOXYGENASE, GRIPGHS, MACROPHAGE ACTIVATION- ASSOCIATED MARKER PROTEIN P71/73, PES-2, PHS II, PROSTAGLANDIN H2 SYNTHASE 2, PGH SYNTHASE 2, PGHS-2, PROSTAGLANDIN-ENDOPEROXIDE SYNTHASE 2, TIS10 PROTEIN

 Structural Features

(-) Chains, Units

  1234
Asymmetric Unit : ABCD
Biological Unit 1 (1x): AB  
Biological Unit 2 (1x):   CD

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (4, 26)

Asymmetric Unit (4, 26)
No.NameCountTypeFull Name
1BOG2Ligand/IonB-OCTYLGLUCOSIDE
2HEM4Ligand/IonPROTOPORPHYRIN IX CONTAINING FE
3MXM4Ligand/Ion4-HYDROXY-2-METHYL-N-(5-METHYL-1,3-THIAZOL-2-YL)-2H-1,2-BENZOTHIAZINE-3-CARBOXAMIDE 1,1-DIOXIDE
4NAG16Ligand/IonN-ACETYL-D-GLUCOSAMINE
Biological Unit 1 (4, 13)
No.NameCountTypeFull Name
1BOG1Ligand/IonB-OCTYLGLUCOSIDE
2HEM2Ligand/IonPROTOPORPHYRIN IX CONTAINING FE
3MXM2Ligand/Ion4-HYDROXY-2-METHYL-N-(5-METHYL-1,3-THIAZOL-2-YL)-2H-1,2-BENZOTHIAZINE-3-CARBOXAMIDE 1,1-DIOXIDE
4NAG8Ligand/IonN-ACETYL-D-GLUCOSAMINE
Biological Unit 2 (4, 13)
No.NameCountTypeFull Name
1BOG1Ligand/IonB-OCTYLGLUCOSIDE
2HEM2Ligand/IonPROTOPORPHYRIN IX CONTAINING FE
3MXM2Ligand/Ion4-HYDROXY-2-METHYL-N-(5-METHYL-1,3-THIAZOL-2-YL)-2H-1,2-BENZOTHIAZINE-3-CARBOXAMIDE 1,1-DIOXIDE
4NAG8Ligand/IonN-ACETYL-D-GLUCOSAMINE

(-) Sites  (22, 22)

Asymmetric Unit (22, 22)
No.NameEvidenceResiduesDescription
01AC1SOFTWARETYR A:148 , ALA A:199 , GLN A:203 , HIS A:207 , PHE A:210 , THR A:212 , HIS A:214 , VAL A:295 , ASN A:382 , TYR A:385 , HIS A:386 , HIS A:388 , LEU A:391 , LEU A:408 , VAL A:447 , HOH A:932BINDING SITE FOR RESIDUE HEM A 605
02AC2SOFTWARELEU A:117 , ILE A:345 , VAL A:349 , LEU A:352 , TRP A:387 , PHE A:518 , VAL A:523 , ALA A:527 , SER A:530 , HOH A:725BINDING SITE FOR RESIDUE MXM A 606
03AC3SOFTWARETYR B:148 , ALA B:199 , GLN B:203 , HIS B:207 , PHE B:210 , LYS B:211 , THR B:212 , HIS B:214 , ASN B:382 , TYR B:385 , HIS B:386 , HIS B:388 , LEU B:391 , VAL B:447 , HOH B:833BINDING SITE FOR RESIDUE HEM B 605
04AC4SOFTWAREVAL B:116 , LEU B:117 , ARG B:120 , ILE B:345 , VAL B:349 , LEU B:352 , TRP B:387 , PHE B:518 , ALA B:527 , SER B:530 , LEU B:531 , HOH B:813BINDING SITE FOR RESIDUE MXM B 606
05AC5SOFTWAREGLU A:179 , ARG A:185 , ILE A:442 , GLN A:445 , ARG B:184 , ARG B:185 , ARG B:438 , GLU B:486 , GLU B:490BINDING SITE FOR RESIDUE BOG B 607
06AC6SOFTWAREALA C:199 , GLN C:203 , HIS C:207 , PHE C:210 , LYS C:211 , THR C:212 , HIS C:214 , VAL C:295 , ASN C:382 , TYR C:385 , HIS C:386 , HIS C:388 , LEU C:391 , LEU C:408 , VAL C:447 , HOH C:849BINDING SITE FOR RESIDUE HEM C 605
07AC7SOFTWAREVAL C:116 , LEU C:117 , ILE C:345 , VAL C:349 , LEU C:352 , LEU C:359 , TRP C:387 , MET C:522 , VAL C:523 , ALA C:527 , SER C:530 , LEU C:531 , LEU C:534 , HOH C:860 , HOH C:961BINDING SITE FOR RESIDUE MXM C 606
08AC8SOFTWAREGLU C:179 , ARG C:185 , ILE C:442 , GLN C:445 , GLU D:179 , ARG D:184 , ARG D:185 , ARG D:438 , GLU D:486 , GLU D:490BINDING SITE FOR RESIDUE BOG C 607
09AC9SOFTWARETYR D:148 , ALA D:199 , GLN D:203 , HIS D:207 , PHE D:210 , THR D:212 , HIS D:214 , ASN D:382 , TYR D:385 , HIS D:386 , HIS D:388 , LEU D:391 , LEU D:408 , HOH D:911BINDING SITE FOR RESIDUE HEM D 605
10BC1SOFTWAREVAL D:116 , ARG D:120 , ILE D:345 , VAL D:349 , LEU D:352 , LEU D:359 , TRP D:387 , VAL D:523 , ALA D:527 , SER D:530 , LEU D:531 , HOH D:730BINDING SITE FOR RESIDUE MXM D 606
11BC2SOFTWARETYR A:55 , GLU A:67 , ASN A:68 , HOH A:821BINDING SITE FOR MONO-SACCHARIDE NAG A 601 BOUND TO ASN A 68
12BC3SOFTWAREGLU A:140 , ASN A:144 , TYR A:147 , ARG A:216 , HOH A:798 , HOH A:834 , HOH A:892 , ASP B:239BINDING SITE FOR CHAIN A OF SUGAR BOUND TO ASN A 144 RESIDUES 602 TO 603
13BC4SOFTWARELYS A:405 , GLN A:406 , ASN A:410 , ILE A:413BINDING SITE FOR MONO-SACCHARIDE NAG A 604 BOUND TO ASN A 410
14BC5SOFTWARETYR B:55 , GLU B:67 , ASN B:68BINDING SITE FOR MONO-SACCHARIDE NAG B 601 BOUND TO ASN B 68
15BC6SOFTWAREGLU B:140 , ASN B:144 , TYR B:147 , ARG B:216 , PHE B:220 , HOH B:706 , HOH B:807BINDING SITE FOR CHAIN B OF SUGAR BOUND TO ASN B 144 RESIDUES 602 TO 603
16BC7SOFTWAREGLN B:406 , ASN B:410 , SER B:412 , ILE B:413BINDING SITE FOR MONO-SACCHARIDE NAG B 604 BOUND TO ASN B 410
17BC8SOFTWARETYR C:55 , GLU C:67 , ASN C:68 , HOH C:796 , HOH C:833BINDING SITE FOR MONO-SACCHARIDE NAG C 601 BOUND TO ASN C 68
18BC9SOFTWAREGLU C:140 , ASN C:144 , TYR C:147 , ARG C:216 , HOH C:722 , HOH C:895BINDING SITE FOR CHAIN C OF SUGAR BOUND TO ASN C 144 RESIDUES 602 TO 603
19CC1SOFTWARELYS C:405 , GLN C:406 , ASN C:410 , ILE C:413BINDING SITE FOR MONO-SACCHARIDE NAG C 604 BOUND TO ASN C 410
20CC2SOFTWARETYR D:55 , GLU D:67 , ASN D:68 , HOH D:858 , HOH D:883BINDING SITE FOR MONO-SACCHARIDE NAG D 601 BOUND TO ASN D 68
21CC3SOFTWAREGLU D:140 , ASN D:144 , TYR D:147 , ARG D:216 , HOH D:846 , HOH D:918 , HOH D:968BINDING SITE FOR CHAIN D OF SUGAR BOUND TO ASN D 144 RESIDUES 602 TO 603
22CC4SOFTWAREGLN D:406 , ASN D:410 , SER D:412 , ILE D:413 , GLU D:416BINDING SITE FOR MONO-SACCHARIDE NAG D 604 BOUND TO ASN D 410

(-) SS Bonds  (20, 20)

Asymmetric Unit
No.Residues
1A:36 -A:47
2A:37 -A:159
3A:41 -A:57
4A:59 -A:69
5A:569 -A:575
6B:36 -B:47
7B:37 -B:159
8B:41 -B:57
9B:59 -B:69
10B:569 -B:575
11C:36 -C:47
12C:37 -C:159
13C:41 -C:57
14C:59 -C:69
15C:569 -C:575
16D:36 -D:47
17D:37 -D:159
18D:41 -D:57
19D:59 -D:69
20D:569 -D:575

(-) Cis Peptide Bonds  (4, 4)

Asymmetric Unit
No.Residues
1Ser A:126 -Pro A:127
2Ser B:126 -Pro B:127
3Ser C:126 -Pro C:127
4Ser D:126 -Pro D:127

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4M11)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4M11)

(-) Exons   (0, 0)

(no "Exon" information available for 4M11)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:552
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         
               SCOP domains d4m11a1 A:33-73                          d4m11a2 A:74-583 Prostaglandin H2 synthase                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .............eeeeee..eeeee.....ee.....eehhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhh.................hhhhhhh............................hhhhhhhhhh............hhhhhhhhhhhhh......................hhhhhh.hhhhhhhhh.........eee..eee..hhhhhh.........hhhhh..........hhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.......hhhhhh..........hhhhhhhh.hhhhh...eee..eeehhhhhh..hhhhhhhhhhhhhhhhhhh...........hhhhhhhhhhhhhhhhhh...hhhhhhhhh......hhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhh........hhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhh.hhhhhhhhhh........... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                4m11 A   33 ANPCCSNPCQNRGECMSTGFDQYKCDCTRTGFYGENCTTPEFLTRIKLLLKPTPNTVHYILTHFKGVWNIVNNIPFLRSLIMKYVLTSRSYLIDSPPTYNVHYGYKSWEAFSNLSYYTRALPPVADDCPTPMGVKGNKELPDSKEVLEKVLLRREFIPDPQGSNMMFAFFAQHFTHQFFKTDHKRGPGFTRGLGHGVDLNHIYGETLDRQHKLRLFKDGKLKYQVIGGEVYPPTVKDTQVEMIYPPHIPENLQFAVGQEVFGLVPGLMMYATIWLREHNRVCDILKQEHPEWGDEQLFQTSRLILIGETIKIVIEDYVQHLSGYHFKLKFDPELLFNQQFQYQNRIASEFNTLYHWHPLLPDTFNIEDQEYSFKQFLYNNSILLEHGLTQFVESFTRQIAGRVAGGRNVPIAVQAVAKASIDQSREMKYQSLNEYRKRFSLKPYTSFEELTGEKEMAAELKALYSDIDVMELYPALLVEKPRPDAIFGETMVELGAPFSLKGLMGNPICSPQYWKPSTFGGEVGFKIINTASIQSLICNNVKGCPFTSFNVQ  583
                                    42        52        62        72        82        92       102   |   111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441       451       461       471       481       491       501       511       521       531       541       551       561       571       581  
                                                                                                  105A                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              


Chain B from PDB  Type:PROTEIN  Length:552
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         
               SCOP domains d4m11b1 B:33-73                          d4m11b2 B:74-583 Prostaglandin H2 synthase                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .............eeee.....eeee.....ee.....eehhhhhhhhh...hhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhh.........ee......hhhhhhh....ee......................hhhhhhhhhh............hhhhhhhhhhhhh......................hhhhhh.hhhhhhhhh.........eee..eee..hhhhhh.........hhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.......hhhhhh..........hhhhhhhhhhhhhh...eee..eeehhhhhh..hhhhhhhhhhhhhhhhhhh...........hhhhhhhhhhhhhhhhhh...hhhhhhhhh......hhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhh........hhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhh.hhhhhhhhhh........... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                4m11 B   33 ANPCCSNPCQNRGECMSTGFDQYKCDCTRTGFYGENCTTPEFLTRIKLLLKPTPNTVHYILTHFKGVWNIVNNIPFLRSLIMKYVLTSRSYLIDSPPTYNVHYGYKSWEAFSNLSYYTRALPPVADDCPTPMGVKGNKELPDSKEVLEKVLLRREFIPDPQGSNMMFAFFAQHFTHQFFKTDHKRGPGFTRGLGHGVDLNHIYGETLDRQHKLRLFKDGKLKYQVIGGEVYPPTVKDTQVEMIYPPHIPENLQFAVGQEVFGLVPGLMMYATIWLREHNRVCDILKQEHPEWGDEQLFQTSRLILIGETIKIVIEDYVQHLSGYHFKLKFDPELLFNQQFQYQNRIASEFNTLYHWHPLLPDTFNIEDQEYSFKQFLYNNSILLEHGLTQFVESFTRQIAGRVAGGRNVPIAVQAVAKASIDQSREMKYQSLNEYRKRFSLKPYTSFEELTGEKEMAAELKALYSDIDVMELYPALLVEKPRPDAIFGETMVELGAPFSLKGLMGNPICSPQYWKPSTFGGEVGFKIINTASIQSLICNNVKGCPFTSFNVQ  583
                                    42        52        62        72        82        92       102   |   111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441       451       461       471       481       491       501       511       521       531       541       551       561       571       581  
                                                                                                  105A                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              


Chain C from PDB  Type:PROTEIN  Length:552
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         
               SCOP domains d4m11c1 C:33-73                          d4m11c2 C:74-583 Prostaglandin H2 synthase                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .............eeee.....eeee.....ee.....eehhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.................hhhhhhh............................hhhhhhhhhh............hhhhhhhhhhhhh......................hhhhhh.hhhhhhhhh.........eee..eee..hhhhhh.........hhhhh..........hhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.......hhhhhh..........hhhhhhhh.hhhhh...eee..eeehhhhhh..hhhhhhhhhhhhhhhhhhh...........hhhhhhhhhhhhhhhhhh...hhhhhhhhh......hhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhh........hhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhh.hhhhhhhhhh........... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                4m11 C   33 ANPCCSNPCQNRGECMSTGFDQYKCDCTRTGFYGENCTTPEFLTRIKLLLKPTPNTVHYILTHFKGVWNIVNNIPFLRSLIMKYVLTSRSYLIDSPPTYNVHYGYKSWEAFSNLSYYTRALPPVADDCPTPMGVKGNKELPDSKEVLEKVLLRREFIPDPQGSNMMFAFFAQHFTHQFFKTDHKRGPGFTRGLGHGVDLNHIYGETLDRQHKLRLFKDGKLKYQVIGGEVYPPTVKDTQVEMIYPPHIPENLQFAVGQEVFGLVPGLMMYATIWLREHNRVCDILKQEHPEWGDEQLFQTSRLILIGETIKIVIEDYVQHLSGYHFKLKFDPELLFNQQFQYQNRIASEFNTLYHWHPLLPDTFNIEDQEYSFKQFLYNNSILLEHGLTQFVESFTRQIAGRVAGGRNVPIAVQAVAKASIDQSREMKYQSLNEYRKRFSLKPYTSFEELTGEKEMAAELKALYSDIDVMELYPALLVEKPRPDAIFGETMVELGAPFSLKGLMGNPICSPQYWKPSTFGGEVGFKIINTASIQSLICNNVKGCPFTSFNVQ  583
                                    42        52        62        72        82        92       102   |   111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441       451       461       471       481       491       501       511       521       531       541       551       561       571       581  
                                                                                                  105A                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              


Chain D from PDB  Type:PROTEIN  Length:552
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         
               SCOP domains d4m11d1 D:33-73                          d4m11d2 D:74-583 Prostaglandin H2 synthase                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .............eeee.....eeee.....ee.....eehhhhhhhhhhh.hhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhh.................hhhhhhh............................hhhhhhhhhh............hhhhhhhhhhhhh......................hhhhhh.hhhhhhhhh.........eee..eee..hhhhhh.........hhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.......hhhhhh..........hhhhhhhhhhhhhh...eee..eeehhhhhh..hhhhhhhhhhhhhhhhhhh...........hhhhhhhhhhhhhhhhhh...hhhhhhhhh......hhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhh........hhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhh.hhhhhhhhhh........... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                4m11 D   33 ANPCCSNPCQNRGECMSTGFDQYKCDCTRTGFYGENCTTPEFLTRIKLLLKPTPNTVHYILTHFKGVWNIVNNIPFLRSLIMKYVLTSRSYLIDSPPTYNVHYGYKSWEAFSNLSYYTRALPPVADDCPTPMGVKGNKELPDSKEVLEKVLLRREFIPDPQGSNMMFAFFAQHFTHQFFKTDHKRGPGFTRGLGHGVDLNHIYGETLDRQHKLRLFKDGKLKYQVIGGEVYPPTVKDTQVEMIYPPHIPENLQFAVGQEVFGLVPGLMMYATIWLREHNRVCDILKQEHPEWGDEQLFQTSRLILIGETIKIVIEDYVQHLSGYHFKLKFDPELLFNQQFQYQNRIASEFNTLYHWHPLLPDTFNIEDQEYSFKQFLYNNSILLEHGLTQFVESFTRQIAGRVAGGRNVPIAVQAVAKASIDQSREMKYQSLNEYRKRFSLKPYTSFEELTGEKEMAAELKALYSDIDVMELYPALLVEKPRPDAIFGETMVELGAPFSLKGLMGNPICSPQYWKPSTFGGEVGFKIINTASIQSLICNNVKGCPFTSFNVQ  583
                                    42        52        62        72        82        92       102   |   111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441       451       461       471       481       491       501       511       521       531       541       551       561       571       581  
                                                                                                  105A
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (2, 8)

Asymmetric Unit
(-)
Class: All alpha proteins (14657)
(-)
Class: Small proteins (3458)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4M11)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4M11)

(-) Gene Ontology  (85, 85)

Asymmetric Unit(hide GO term definitions)

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 Related Entries

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        PGH2_MOUSE | Q05769: 1cvu 1cx2 1dcx 1dd0 1ddx 1pxx 3hs5 3hs6 3hs7 3krk 3ln0 3ln1 3mdl 3mqe 3nt1 3ntb 3ntg 3olt 3olu 3pgh 3q7d 3qh0 3qmo 3rr3 3tzi 4cox 4e1g 4fm5 4m10 4otj 4oty 4ph9 4rrw 4rrx 4rry 4rrz 4rs0 4rut 4z0l 5cox 5fdq 5jvy 5jvz 5jw1 6cox

(-) Related Entries Specified in the PDB File

3nt1 4fm5 4llz 4m10