4FM5 - JenaLib

Asymmetric Unit (Jmol Viewer)

Asym. Unit - sites (Jmol Viewer)

Biological Unit 1 (Jmol Viewer)

Biol. Unit 1 - sites (Jmol Viewer)

Biological Unit 2 (Jmol Viewer)

Title :   X-RAY STRUCTURE OF DES-METHYLFLURBIPROFEN BOUND TO MURINE COX-2

Authors :   S. Xu, S. Banerjee, M. A. Windsor, L. J. Marnett

Date :   15 Jun 12 (Deposition) - 29 Aug 12 (Release) - 19 Dec 12 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   2.81

Chains :   Asym. Unit : A,B,C,D
Biol. Unit 1: A,B  (1x)
Biol. Unit 2: C,D  (1x)

Keywords :   Membrane Protein, Cyclooxygenase, Heme Binding, Oxidoreductase- Oxidoreductase Inhibitor Complex (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   M. A. Windsor, D. J. Hermanson, P. J. Kingsley, S. Xu, B. C. Crews, W. Ho, C. M. Keenan, S. Banerjee, K. A. Sharkey, L. J. Marnett
Substrate-Selective Inhibition Of Cyclooxygenase-2: Development And Evaluation Of Achiral Profen Probes.
Acs Med Chem Lett V. 3 759 2012
PubMed-ID: 22984634 | Reference-DOI: 10.1021/ML3001616

Molecule 1 - PROSTAGLANDIN G/H SYNTHASE 2
	Chains	:	A, B, C, D
	EC Number	:	1.14.99.1
	Engineered	:	YES
	Expression System	:	SPODOPTERA FRUGIPERDA
	Expression System Taxid	:	7108
	Fragment	:	PROSTAGLANDIN G/H SYNTHASE 2
	Gene	:	PTGS2, COX-2, COX2, PGHS-B, TIS10
	Organism Common	:	MOUSE
	Organism Scientific	:	MUS MUSCULUS
	Organism Taxid	:	10090
	Synonym	:	CYCLOOXYGENASE-2, COX-2, GLUCOCORTICOID-REGULATED INFLAMMATORY CYCLOOXYGENASE, GRIPGHS, MACROPHAGE ACTIVATION- ASSOCIATED MARKER PROTEIN P71/73, PES-2, PHS II, PROSTAGLANDIN H2 SYNTHASE 2, PGH SYNTHASE 2, PGHS-2, PROSTAGLANDIN-ENDOPEROXIDE SYNTHASE 2, TIS10 PROTEIN

		1	2	3	4
Asymmetric Unit	:	A	B	C	D
Biological Unit 1 (1x)	:	A	B
Biological Unit 2 (1x)	:			C	D

Summary Information (see also Sequences/Alignments below)

Asymmetric Unit (4, 22)

No.	Name	Count	Type	Full Name
1	BOG	6	Ligand/Ion	B-OCTYLGLUCOSIDE
2	DF0	4	Ligand/Ion	(2-FLUOROBIPHENYL-4-YL)ACETIC ACID
3	HEM	4	Ligand/Ion	PROTOPORPHYRIN IX CONTAINING FE
4	NAG	8	Ligand/Ion	N-ACETYL-D-GLUCOSAMINE

Biological Unit 1 (4, 11)

No.	Name	Count	Type	Full Name
1	BOG	3	Ligand/Ion	B-OCTYLGLUCOSIDE
2	DF0	2	Ligand/Ion	(2-FLUOROBIPHENYL-4-YL)ACETIC ACID
3	HEM	2	Ligand/Ion	PROTOPORPHYRIN IX CONTAINING FE
4	NAG	4	Ligand/Ion	N-ACETYL-D-GLUCOSAMINE

Biological Unit 2 (4, 11)

No.	Name	Count	Type	Full Name
1	BOG	3	Ligand/Ion	B-OCTYLGLUCOSIDE
2	DF0	2	Ligand/Ion	(2-FLUOROBIPHENYL-4-YL)ACETIC ACID
3	HEM	2	Ligand/Ion	PROTOPORPHYRIN IX CONTAINING FE
4	NAG	4	Ligand/Ion	N-ACETYL-D-GLUCOSAMINE

Asymmetric Unit (22, 22)

No.	Name	Evidence	Residues	Description
01	AC1	SOFTWARE	GLU A:179 , ARG A:185 , ARG A:438 , GLU A:486 , GLU A:490 , HOH A:831 , GLU B:179 , ARG B:184 , ARG B:185 , ILE B:442 , GLN B:445	BINDING SITE FOR RESIDUE BOG A 701
02	AC2	SOFTWARE	PRO A:83 , SER A:119 , ARG A:120 , LEU A:123 , GLU A:524	BINDING SITE FOR RESIDUE BOG A 702
03	AC3	SOFTWARE	ARG A:216 , NAG A:704 , LEU B:238	BINDING SITE FOR RESIDUE NAG A 703
04	AC4	SOFTWARE	ASN A:144 , TYR A:147 , ARG A:216 , NAG A:703	BINDING SITE FOR RESIDUE NAG A 704
05	AC5	SOFTWARE	TYR A:148 , ALA A:199 , ALA A:202 , GLN A:203 , HIS A:207 , PHE A:210 , LYS A:211 , THR A:212 , HIS A:214 , VAL A:295 , ASN A:382 , TYR A:385 , HIS A:386 , HIS A:388 , LEU A:391 , VAL A:447 , ALA A:450	BINDING SITE FOR RESIDUE HEM A 705
06	AC6	SOFTWARE	ARG A:120 , VAL A:349 , LEU A:352 , TYR A:355 , TYR A:385 , TRP A:387 , GLY A:526 , ALA A:527	BINDING SITE FOR RESIDUE DF0 A 706
07	AC7	SOFTWARE	LYS B:82 , PRO B:83 , VAL B:88 , LEU B:92 , TYR B:115 , SER B:119 , ARG B:120 , LEU B:123	BINDING SITE FOR RESIDUE BOG B 701
08	AC8	SOFTWARE	LEU A:238 , ASP A:239 , ARG B:216 , NAG B:703 , HOH B:817	BINDING SITE FOR RESIDUE NAG B 702
09	AC9	SOFTWARE	GLU B:140 , ASN B:144 , TYR B:147 , ARG B:216 , NAG B:702 , HOH B:815	BINDING SITE FOR RESIDUE NAG B 703
10	BC1	SOFTWARE	ALA B:199 , GLN B:203 , HIS B:207 , PHE B:210 , LYS B:211 , THR B:212 , HIS B:214 , VAL B:295 , ASN B:382 , TYR B:385 , HIS B:386 , HIS B:388 , LEU B:391 , LEU B:408 , HOH B:832	BINDING SITE FOR RESIDUE HEM B 704
11	BC2	SOFTWARE	ARG B:120 , VAL B:349 , LEU B:352 , TYR B:355 , TYR B:385 , TRP B:387 , GLY B:526 , ALA B:527 , SER B:530	BINDING SITE FOR RESIDUE DF0 B 705
12	BC3	SOFTWARE	GLU C:179 , ARG C:185 , ARG C:438 , GLU C:486 , GLU C:490 , GLU D:179 , ARG D:185 , ILE D:442 , GLN D:445	BINDING SITE FOR RESIDUE BOG C 701
13	BC4	SOFTWARE	LYS C:82 , PRO C:83 , VAL C:88 , ILE C:112 , TYR C:115 , SER C:119 , HOH C:816	BINDING SITE FOR RESIDUE BOG C 702
14	BC5	SOFTWARE	ARG C:216 , PHE C:220 , NAG C:704	BINDING SITE FOR RESIDUE NAG C 703
15	BC6	SOFTWARE	ASN C:144 , TYR C:147 , ARG C:216 , PHE C:220 , NAG C:703 , HOH C:815	BINDING SITE FOR RESIDUE NAG C 704
16	BC7	SOFTWARE	ALA C:199 , ALA C:202 , GLN C:203 , PHE C:210 , LYS C:211 , THR C:212 , VAL C:295 , ASN C:382 , TYR C:385 , HIS C:386 , HIS C:388 , LEU C:391 , LEU C:408 , VAL C:447 , GLN C:454	BINDING SITE FOR RESIDUE HEM C 705
17	BC8	SOFTWARE	ARG C:120 , VAL C:349 , LEU C:352 , TYR C:355 , TYR C:385 , TRP C:387 , GLY C:526 , ALA C:527 , SER C:530	BINDING SITE FOR RESIDUE DF0 C 706
18	BC9	SOFTWARE	LYS D:82 , PRO D:83 , PRO D:85 , VAL D:88 , SER D:119 , ARG D:120 , LEU D:123	BINDING SITE FOR RESIDUE BOG D 701
19	CC1	SOFTWARE	LEU C:238 , ARG D:216 , PHE D:220 , NAG D:703	BINDING SITE FOR RESIDUE NAG D 702
20	CC2	SOFTWARE	GLU D:140 , ASN D:144 , TYR D:147 , ARG D:216 , PHE D:220 , NAG D:702 , HOH D:815	BINDING SITE FOR RESIDUE NAG D 703
21	CC3	SOFTWARE	GLN D:203 , HIS D:207 , PHE D:210 , LYS D:211 , THR D:212 , HIS D:214 , ASN D:382 , TYR D:385 , HIS D:386 , HIS D:388 , LEU D:391 , PHE D:395 , LEU D:408 , HOH D:814	BINDING SITE FOR RESIDUE HEM D 704
22	CC4	SOFTWARE	ARG D:120 , VAL D:349 , LEU D:352 , TYR D:355 , TYR D:385 , TRP D:387 , GLY D:526 , ALA D:527 , SER D:530	BINDING SITE FOR RESIDUE DF0 D 705

Asymmetric Unit

No.	Residues
1	A:35	-	A:46
2	A:36	-	A:159
3	A:40	-	A:56
4	A:58	-	A:68
5	A:569	-	A:575
6	B:35	-	B:46
7	B:36	-	B:159
8	B:40	-	B:56
9	B:58	-	B:68
10	B:569	-	B:575
11	C:35	-	C:46
12	C:36	-	C:159
13	C:40	-	C:56
14	C:58	-	C:68
15	C:569	-	C:575
16	D:35	-	D:46
17	D:36	-	D:159
18	D:40	-	D:56
19	D:58	-	D:68
20	D:569	-	D:575

Asymmetric Unit

No.	Residues
1	Ser A:126	-	Pro A:127
2	Ser B:126	-	Pro B:127
3	Ser C:126	-	Pro C:127
4	Ser D:126	-	Pro D:127

(no "SAP(SNP)/Variant" information available for 4FM5)

(no "PROSITE Motif" information available for 4FM5)

(no "Exon" information available for 4FM5)

Asymmetric Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain A from PDB  Type:PROTEIN  Length:552
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        
               SCOP domains d4fm5a1 A:32-72                          d4fm5a2 A:73-583 Prostaglandin H2 synthase                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .............eeee.....eeee.....ee.....eehhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhh...............hhhhhhh............................hhhhhhhhhh............hhhhhhhhhhhhh......................hhhhhh.hhhhhhhhh.........eee..eee..hhhhhh.........hhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.......hhhhhh..........hhhhhhhhhhhhhh...........hhhhhh..hhhhhhhhhhhhhhhhhhh...........hhhhhhhhhhhhhhhhhh...hhhhhhhhh......hhhhhhh.hhhhhhhhhhh.hhhhhhhhhhhhhh........hhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhh.hhhhhhhh............. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 4fm5 A  32 ANPCCSNPCQNRGECMSTGFDQYKCDCTRTGFYGENCTTPEFLTRIKLLLKPTPNTVHYILTHFKGVWNIVNNIPFLRSLIMKYVLTSRSYLIDSPPTYNVHYGYKSWEAFSNLSYYTRALPPVADDCPTPMGVKGNKELPDSKEVLEKVLLRREFIPDPQGSNMMFAFFAQHFTHQFFKTDHKRGPGFTRGLGHGVDLNHIYGETLDRQHKLRLFKDGKLKYQVIGGEVYPPTVKDTQVEMIYPPHIPENLQFAVGQEVFGLVPGLMMYATIWLREHNRVCDILKQEHPEWGDEQLFQTSRLILIGETIKIVIEDYVQHLSGYHFKLKFDPELLFNQQFQYQNRIASEFNTLYHWHPLLPDTFNIEDQEYSFKQFLYNNSILLEHGLTQFVESFTRQIAGRVAGGRNVPIAVQAVAKASIDQSREMKYQSLNEYRKRFSLKPYTSFEELTGEKEMAAELKALYSDIDVMELYPALLVEKPRPDAIFGETMVELGAPFSLKGLMGNPICSPQYWKPSTFGGEVGFKIINTASIQSLICNNVKGCPFTSFNVQ 583
                                    41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441       451       461       471       481       491       501       511       521       531       541       551       561       571       581

Chain B from PDB  Type:PROTEIN  Length:552
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        
               SCOP domains d4fm5b1 B:32-72                          d4fm5b2 B:73-583 Prostaglandin H2 synthase                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .............eeee.....eeee.....ee.....eehhhhhhhhhhh.hhhhhhhhhh.hhhhhhhhh.hhhhhhhhhhhhhhhhhh...............hhhhhhh............................hhhhhhhhhh............hhhhhhhhhhhhh......................hhhhhh.hhhhhhhhh.........eee..eee..hhhhhh........................hhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.......hhhhhh..........hhhhhhhhhhhhhh...........hhhhhh..hhhhhhhhhhhhhhhhhhh...........hhhhhhhhhhhhhhhhhh...hhhhhhhhh......hhhhhhh.hhhhhhhhhhh.hhhhhhhhhhhhhh........hhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhh.hhhhhhhh............. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 4fm5 B  32 ANPCCSNPCQNRGECMSTGFDQYKCDCTRTGFYGENCTTPEFLTRIKLLLKPTPNTVHYILTHFKGVWNIVNNIPFLRSLIMKYVLTSRSYLIDSPPTYNVHYGYKSWEAFSNLSYYTRALPPVADDCPTPMGVKGNKELPDSKEVLEKVLLRREFIPDPQGSNMMFAFFAQHFTHQFFKTDHKRGPGFTRGLGHGVDLNHIYGETLDRQHKLRLFKDGKLKYQVIGGEVYPPTVKDTQVEMIYPPHIPENLQFAVGQEVFGLVPGLMMYATIWLREHNRVCDILKQEHPEWGDEQLFQTSRLILIGETIKIVIEDYVQHLSGYHFKLKFDPELLFNQQFQYQNRIASEFNTLYHWHPLLPDTFNIEDQEYSFKQFLYNNSILLEHGLTQFVESFTRQIAGRVAGGRNVPIAVQAVAKASIDQSREMKYQSLNEYRKRFSLKPYTSFEELTGEKEMAAELKALYSDIDVMELYPALLVEKPRPDAIFGETMVELGAPFSLKGLMGNPICSPQYWKPSTFGGEVGFKIINTASIQSLICNNVKGCPFTSFNVQ 583
                                    41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441       451       461       471       481       491       501       511       521       531       541       551       561       571       581

Chain C from PDB  Type:PROTEIN  Length:552
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        
               SCOP domains d4fm5c1 C:32-72                          d4fm5c2 C:73-583 Prostaglandin H2 synthase                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .............eeee.....eeee.....ee.....eehhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhh...............hhhhhhh............................hhhhhhhhhh............hhhhhhhhhhhhh......................hhhhhh.hhhhhhhhh.........eee..eee..hhhhhh........................hhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.......hhhhhh..........hhhhhhhhhhhhhh...........hhhhhh..hhhhhhhhhhhhhhhhhhh...........hhhhhhhhhhhhhhhhhh...hhhhhhhhh......hhhhhhh.hhhhhhhhhhh.hhhhhhhhhhhhhh........hhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhh.hhhhhhhh............. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 4fm5 C  32 ANPCCSNPCQNRGECMSTGFDQYKCDCTRTGFYGENCTTPEFLTRIKLLLKPTPNTVHYILTHFKGVWNIVNNIPFLRSLIMKYVLTSRSYLIDSPPTYNVHYGYKSWEAFSNLSYYTRALPPVADDCPTPMGVKGNKELPDSKEVLEKVLLRREFIPDPQGSNMMFAFFAQHFTHQFFKTDHKRGPGFTRGLGHGVDLNHIYGETLDRQHKLRLFKDGKLKYQVIGGEVYPPTVKDTQVEMIYPPHIPENLQFAVGQEVFGLVPGLMMYATIWLREHNRVCDILKQEHPEWGDEQLFQTSRLILIGETIKIVIEDYVQHLSGYHFKLKFDPELLFNQQFQYQNRIASEFNTLYHWHPLLPDTFNIEDQEYSFKQFLYNNSILLEHGLTQFVESFTRQIAGRVAGGRNVPIAVQAVAKASIDQSREMKYQSLNEYRKRFSLKPYTSFEELTGEKEMAAELKALYSDIDVMELYPALLVEKPRPDAIFGETMVELGAPFSLKGLMGNPICSPQYWKPSTFGGEVGFKIINTASIQSLICNNVKGCPFTSFNVQ 583
                                    41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441       451       461       471       481       491       501       511       521       531       541       551       561       571       581

Chain D from PDB  Type:PROTEIN  Length:552
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        
               SCOP domains d4fm5d1 D:32-72                          d4fm5d2 D:73-583 Prostaglandin H2 synthase                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .............eeee.....eeee.....ee.....eehhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhh...............hhhhhhh............................hhhhhhhhhh............hhhhhhhhhhhhh......................hhhhhh.hhhhhhhhh.........eee..eee..hhhhhh....................hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.......hhhhhh..........hhhhhhhhhhhhhh...........hhhhhh..hhhhhhhhhhhhhhhhhhh...........hhhhhhhhhhhhhhhhhh...hhhhhhhhh......hhhhhhh.hhhhhhhhh...hhhhhhhhhhhhhh........hhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhh.hhhhhhhhhh........... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 4fm5 D  32 ANPCCSNPCQNRGECMSTGFDQYKCDCTRTGFYGENCTTPEFLTRIKLLLKPTPNTVHYILTHFKGVWNIVNNIPFLRSLIMKYVLTSRSYLIDSPPTYNVHYGYKSWEAFSNLSYYTRALPPVADDCPTPMGVKGNKELPDSKEVLEKVLLRREFIPDPQGSNMMFAFFAQHFTHQFFKTDHKRGPGFTRGLGHGVDLNHIYGETLDRQHKLRLFKDGKLKYQVIGGEVYPPTVKDTQVEMIYPPHIPENLQFAVGQEVFGLVPGLMMYATIWLREHNRVCDILKQEHPEWGDEQLFQTSRLILIGETIKIVIEDYVQHLSGYHFKLKFDPELLFNQQFQYQNRIASEFNTLYHWHPLLPDTFNIEDQEYSFKQFLYNNSILLEHGLTQFVESFTRQIAGRVAGGRNVPIAVQAVAKASIDQSREMKYQSLNEYRKRFSLKPYTSFEELTGEKEMAAELKALYSDIDVMELYPALLVEKPRPDAIFGETMVELGAPFSLKGLMGNPICSPQYWKPSTFGGEVGFKIINTASIQSLICNNVKGCPFTSFNVQ 583
                                    41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441       451       461       471       481       491       501       511       521       531       541       551       561       571       581

Legend:		→ Mismatch	(orange background)
	-	→ Gap	(green background, '-', border residues have a numbering label)
		→ Modified Residue	(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

Asymmetric Unit

Classes(

)

Folds(

)

Superfamilies( (-)

)

Families(

)

Protein Domains( (-)

)

Organisms( (-)

)

Class: All alpha proteins (14657)

Fold: Heme-dependent peroxidases (402)

Superfamily: Heme-dependent peroxidases (402)

Family: Myeloperoxidase-like (44)

Protein domain: Prostaglandin H2 synthase (34)

Mouse (Mus musculus) [TaxId: 10090] (11)

1a	d4fm5a2	A:73-583
1b	d4fm5b2	B:73-583
1c	d4fm5c2	C:73-583
1d	d4fm5d2	D:73-583

Class: Small proteins (3458)

Fold: Knottins (small inhibitors, toxins, lectins) (761)

Superfamily: EGF/Laminin (347)

Family: EGF-type module (304)

Protein domain: Prostaglandin H2 synthase-1, EGF-like module (34)

Mouse (Mus musculus) [TaxId: 10090] (11)

2a	d4fm5a1	A:32-72
2b	d4fm5b1	B:32-72
2c	d4fm5c1	C:32-72
2d	d4fm5d1	D:32-72

(no "CATH Domain" information available for 4FM5)

(no "Pfam Domain" information available for 4FM5)

Asymmetric Unit(hide GO term definitions)

Asymmetric Unit
	Complete Structure
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	Ligands, Modified Residues, Ions
		BOG	[ RasMol \| Jena3D ]	+environment [ RasMol \| Jena3D ]
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		NAG	[ RasMol \| Jena3D ]	+environment [ RasMol \| Jena3D ]

	Sites
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	Cis Peptide Bonds
		Ser A:126 - Pro A:127	[ RasMol ]
		Ser B:126 - Pro B:127	[ RasMol ]
		Ser C:126 - Pro C:127	[ RasMol ]
		Ser D:126 - Pro D:127	[ RasMol ]

Biological Units
	Complete Structure
		Biological Unit 1	[ Jena3D ]
		Biological Unit 2	[ Jena3D ]

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Access by PDB/NDB ID
	4fm5
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		Orientation in Membranes	:	OPM
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	PGH2_MOUSE \| Q05769
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	1.14.99.1
		General Enzyme Information	:	BRENDA \| EC-PDB \| Enzyme \| IntEnz
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		Interatomic Contacts of Structural Units	:	CSU
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Access by UniProt ID/Accession number
	PGH2_MOUSE \| Q05769
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Description

Compounds

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (4, 22)

Sites (22, 22)

SS Bonds (20, 20)

Cis Peptide Bonds (4, 4)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (0, 0)

PROSITE Motifs (0, 0)

Exons (0, 0)

Sequences/Alignments

Classification and Annotation

SCOP Domains (2, 8)

CATH Domains (0, 0)

Pfam Domains (0, 0)

Gene Ontology (85, 85)

Visualization

Interactive Views

Still Images

Databases and Analysis Tools

Databases

Analysis Tools

Related Entries

Entries Sharing at Least One Protein Chain (UniProt ID)

Related Entries Specified in the PDB File