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(-) Description

Title :  THERMUS THERMOPHILUS HB27 30S RIBOSOMAL SUBUNIT LACKING RIBOSOMAL PROTEIN S17
 
Authors :  E. L. Murphy, G. Jogl
Date :  22 May 13  (Deposition) - 04 Jun 14  (Release) - 04 Jun 14  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  4.20
Chains :  Asym./Biol. Unit :  A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,R,S,T,U
Keywords :  30S Ribosomal Subunit, Translation, 50S Ribosomal Subunit, Ribosome (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  J. L. Connetti, E. L. Murphy, A. E. Dahlberg, S. T. Gregory, G. Jogl
Structural Robustness Of The Ribosome Inferred From The X-Ray Crystal Structure Of A 30S Ribosomal Subunit Lacking Ribosomal Protein S17
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - 16S RRNA
    Chains: A
    Organism Scientific: THERMUS THERMOPHILUS
    Organism Taxid: 262724
    Strain: HB27
 
Molecule 2 - 30S RIBOSOMAL PROTEIN S2
    Chains: B
    Organism Scientific: THERMUS THERMOPHILUS
    Organism Taxid: 262724
    Strain: HB27
 
Molecule 3 - 30S RIBOSOMAL PROTEIN S3
    Chains: C
    Organism Scientific: THERMUS THERMOPHILUS
    Organism Taxid: 262724
    Strain: HB27
 
Molecule 4 - 30S RIBOSOMAL PROTEIN S4
    Chains: D
    Organism Scientific: THERMUS THERMOPHILUS
    Organism Taxid: 262724
    Strain: HB27
 
Molecule 5 - 30S RIBOSOMAL PROTEIN S5
    Chains: E
    Organism Scientific: THERMUS THERMOPHILUS
    Organism Taxid: 262724
    Strain: HB27
 
Molecule 6 - 30S RIBOSOMAL PROTEIN S6
    Chains: F
    Organism Scientific: THERMUS THERMOPHILUS
    Organism Taxid: 262724
    Strain: HB27
 
Molecule 7 - 30S RIBOSOMAL PROTEIN S7
    Chains: G
    Organism Scientific: THERMUS THERMOPHILUS
    Organism Taxid: 262724
    Strain: HB27
 
Molecule 8 - 30S RIBOSOMAL PROTEIN S8
    Chains: H
    Organism Scientific: THERMUS THERMOPHILUS
    Organism Taxid: 262724
    Strain: HB27
 
Molecule 9 - 30S RIBOSOMAL PROTEIN S9
    Chains: I
    Organism Scientific: THERMUS THERMOPHILUS
    Organism Taxid: 262724
    Strain: HB27
 
Molecule 10 - 30S RIBOSOMAL PROTEIN S10
    Chains: J
    Organism Scientific: THERMUS THERMOPHILUS
    Organism Taxid: 262724
    Strain: HB27
 
Molecule 11 - 30S RIBOSOMAL PROTEIN S11
    Chains: K
    Organism Scientific: THERMUS THERMOPHILUS
    Organism Taxid: 262724
    Strain: HB27
 
Molecule 12 - 30S RIBOSOMAL PROTEIN S12
    Chains: L
    Organism Scientific: THERMUS THERMOPHILUS
    Organism Taxid: 262724
    Strain: HB27
 
Molecule 13 - 30S RIBOSOMAL PROTEIN S13
    Chains: M
    Organism Scientific: THERMUS THERMOPHILUS
    Organism Taxid: 262724
    Strain: HB27
 
Molecule 14 - 30S RIBOSOMAL PROTEIN S14 TYPE Z
    Chains: N
    Organism Scientific: THERMUS THERMOPHILUS
    Organism Taxid: 262724
    Strain: HB27
 
Molecule 15 - 30S RIBOSOMAL PROTEIN S15
    Chains: O
    Organism Scientific: THERMUS THERMOPHILUS
    Organism Taxid: 262724
    Strain: HB27
 
Molecule 16 - 30S RIBOSOMAL PROTEIN S16
    Chains: P
    Organism Scientific: THERMUS THERMOPHILUS
    Organism Taxid: 262724
    Strain: HB27
 
Molecule 17 - 30S RIBOSOMAL PROTEIN S18
    Chains: R
    Organism Scientific: THERMUS THERMOPHILUS
    Organism Taxid: 262724
    Strain: HB27
 
Molecule 18 - 30S RIBOSOMAL PROTEIN S19
    Chains: S
    Organism Scientific: THERMUS THERMOPHILUS
    Organism Taxid: 262724
    Strain: HB27
 
Molecule 19 - 30S RIBOSOMAL PROTEIN S20
    Chains: T
    Organism Scientific: THERMUS THERMOPHILUS
    Organism Taxid: 262724
    Strain: HB27
 
Molecule 20 - 30S RIBOSOMAL PROTEIN THX
    Chains: U
    Organism Scientific: THERMUS THERMOPHILUS
    Organism Taxid: 262724
    Strain: HB27

 Structural Features

(-) Chains, Units

  1234567891011121314151617181920
Asymmetric/Biological Unit : ABCDEFGHIJKLMNOPRSTU

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (12, 210)

Asymmetric/Biological Unit (12, 210)
No.NameCountTypeFull Name
10TD1Mod. Amino Acid(3S)-3-(METHYLSULFANYL)-L-ASPARTIC ACID
22MG1Mod. Nucleotide2N-METHYLGUANOSINE-5'-MONOPHOSPHATE
34OC1Mod. Nucleotide4N,O2'-METHYLCYTIDINE-5'-MONOPHOSPHATE
45MC4Mod. Nucleotide5-METHYLCYTIDINE-5'-MONOPHOSPHATE
57MG1Mod. Nucleotide7N-METHYL-8-HYDROGUANOSINE-5'-MONOPHOSPHATE
6K35Ligand/IonPOTASSIUM ION
7M2G1Mod. NucleotideN2-DIMETHYLGUANOSINE-5'-MONOPHOSPHATE
8MA62Mod. Nucleotide6N-DIMETHYLADENOSINE-5'-MONOPHOSHATE
9MG158Ligand/IonMAGNESIUM ION
10PSU3Mod. NucleotidePSEUDOURIDINE-5'-MONOPHOSPHATE
11UR31Mod. Nucleotide3-METHYLURIDINE-5'-MONOPHOSHATE
12ZN2Ligand/IonZINC ION

(-) Sites  (160, 160)

Asymmetric Unit (160, 160)
No.NameEvidenceResiduesDescription
001AC1SOFTWAREC A:701 , A A:702BINDING SITE FOR RESIDUE MG A 1601
002AC2SOFTWAREG A:157 , G A:158BINDING SITE FOR RESIDUE MG A 1602
003AC3SOFTWAREC A:564 , G A:567BINDING SITE FOR RESIDUE MG A 1658
004AC4SOFTWAREA A:1500 , G A:1508 , G A:1521 , MG A:1683BINDING SITE FOR RESIDUE MG A 1604
005AC5SOFTWAREC A:1234BINDING SITE FOR RESIDUE MG A 1660
006AC6SOFTWAREG A:730BINDING SITE FOR RESIDUE MG A 1605
007AC7SOFTWAREC A:980BINDING SITE FOR RESIDUE MG A 1661
008AC8SOFTWAREC A:519 , A A:520BINDING SITE FOR RESIDUE MG A 1606
009AC9SOFTWAREA A:1500 , G A:1504 , G A:1505 , A A:1507 , G A:1508BINDING SITE FOR RESIDUE MG A 1662
010BC1SOFTWAREG A:1294 , G A:1295BINDING SITE FOR RESIDUE MG A 1663
011BC2SOFTWAREG A:1441BINDING SITE FOR RESIDUE MG A 1664
012BC3SOFTWAREG A:581 , G A:758BINDING SITE FOR RESIDUE MG A 1609
013BC4SOFTWAREG A:1462BINDING SITE FOR RESIDUE MG A 1665
014BC5SOFTWAREG A:1435 , G A:1464BINDING SITE FOR RESIDUE MG A 1666
015BC6SOFTWAREA A:915BINDING SITE FOR RESIDUE MG A 1667
016BC7SOFTWAREG A:260 , U A:261 , U A:264BINDING SITE FOR RESIDUE MG A 1612
017BC8SOFTWAREG A:299 , G A:558 , U A:560BINDING SITE FOR RESIDUE MG A 1668
018BC9SOFTWAREU A:387BINDING SITE FOR RESIDUE MG A 1613
019CC1SOFTWAREG A:324BINDING SITE FOR RESIDUE MG A 1669
020CC2SOFTWAREG A:11 , U A:12 , G A:21 , G A:22BINDING SITE FOR RESIDUE MG A 1614
021CC3SOFTWAREPSU A:516 , A A:532 , A A:533BINDING SITE FOR RESIDUE MG A 1670
022CC4SOFTWAREG A:475 , G A:476 , K A:1766BINDING SITE FOR RESIDUE MG A 1615
023CC5SOFTWAREG A:595BINDING SITE FOR RESIDUE MG A 1672
024CC6SOFTWAREG A:890BINDING SITE FOR RESIDUE MG A 1617
025CC7SOFTWAREA A:607 , A A:608BINDING SITE FOR RESIDUE MG A 1673
026CC8SOFTWAREG A:31 , C A:47 , C A:48 , U A:114BINDING SITE FOR RESIDUE MG A 1618
027CC9SOFTWAREG A:700BINDING SITE FOR RESIDUE MG A 1674
028DC1SOFTWAREG A:888 , MG A:1649BINDING SITE FOR RESIDUE MG A 1675
029DC2SOFTWAREG A:297 , G A:299BINDING SITE FOR RESIDUE MG A 1620
030DC3SOFTWAREA A:53BINDING SITE FOR RESIDUE MG A 1676
031DC4SOFTWAREU A:582 , A A:583 , G A:584 , U A:757 , G A:758BINDING SITE FOR RESIDUE MG A 1621
032DC5SOFTWAREA A:865 , C A:866 , G A:1079BINDING SITE FOR RESIDUE MG A 1677
033DC6SOFTWAREG A:1432BINDING SITE FOR RESIDUE MG A 1622
034DC7SOFTWAREA A:1067 , G A:1068 , G A:1094BINDING SITE FOR RESIDUE MG A 1678
035DC8SOFTWAREG A:727BINDING SITE FOR RESIDUE MG A 1623
036DC9SOFTWAREG A:1082 , U A:1083BINDING SITE FOR RESIDUE MG A 1679
037EC1SOFTWAREG A:976 , U A:1358 , C A:1359BINDING SITE FOR RESIDUE MG A 1624
038EC2SOFTWAREG A:1266 , A A:1268BINDING SITE FOR RESIDUE MG A 1681
039EC3SOFTWAREG A:903BINDING SITE FOR RESIDUE MG A 1682
040EC4SOFTWAREA A:1499 , A A:1500 , G A:1508 , G A:1521 , MG A:1604BINDING SITE FOR RESIDUE MG A 1683
041EC5SOFTWAREC A:749 , G A:750BINDING SITE FOR RESIDUE MG A 1628
042EC6SOFTWAREG A:683BINDING SITE FOR RESIDUE MG A 1629
043EC7SOFTWAREC A:924 , G A:925 , G A:927 , U A:1390 , U A:1391 , K A:1774BINDING SITE FOR RESIDUE MG A 1685
044EC8SOFTWAREG A:587BINDING SITE FOR RESIDUE MG A 1630
045EC9SOFTWAREA A:766BINDING SITE FOR RESIDUE MG A 1631
046FC1SOFTWAREG A:1526BINDING SITE FOR RESIDUE MG A 1687
047FC2SOFTWAREU A:772BINDING SITE FOR RESIDUE MG A 1632
048FC3SOFTWAREA A:553BINDING SITE FOR RESIDUE MG A 1688
049FC4SOFTWAREG A:775BINDING SITE FOR RESIDUE MG A 1633
050FC5SOFTWAREA A:1499 , A A:1500 , G A:1504 , G A:1505BINDING SITE FOR RESIDUE MG A 1689
051FC6SOFTWAREA A:777BINDING SITE FOR RESIDUE MG A 1634
052FC7SOFTWAREA A:780 , LYS K:122BINDING SITE FOR RESIDUE MG A 1635
053FC8SOFTWAREG A:44 , G A:396BINDING SITE FOR RESIDUE MG A 1691
054FC9SOFTWAREG A:576 , G A:577 , C A:578 , C A:817BINDING SITE FOR RESIDUE MG A 1636
055GC1SOFTWAREU A:871BINDING SITE FOR RESIDUE MG A 1637
056GC2SOFTWAREG A:139BINDING SITE FOR RESIDUE MG A 1693
057GC3SOFTWAREG A:362BINDING SITE FOR RESIDUE MG A 1638
058GC4SOFTWAREG A:148 , A A:172BINDING SITE FOR RESIDUE MG A 1694
059GC5SOFTWAREC A:458BINDING SITE FOR RESIDUE MG A 1639
060GC6SOFTWAREA A:509 , A A:510BINDING SITE FOR RESIDUE MG A 1640
061GC7SOFTWAREA A:179 , C A:194 , A A:195BINDING SITE FOR RESIDUE MG A 1696
062GC8SOFTWAREU A:560BINDING SITE FOR RESIDUE MG A 1641
063GC9SOFTWAREG A:181 , U A:182BINDING SITE FOR RESIDUE MG A 1697
064HC1SOFTWAREA A:16BINDING SITE FOR RESIDUE MG A 1642
065HC2SOFTWAREC A:48 , U A:114 , G A:115BINDING SITE FOR RESIDUE MG A 1643
066HC3SOFTWAREA A:1238 , C A:1335BINDING SITE FOR RESIDUE MG A 1699
067HC4SOFTWAREG A:595 , C A:596 , G A:597 , U A:598BINDING SITE FOR RESIDUE MG A 1644
068HC5SOFTWAREC A:522 , C A:536BINDING SITE FOR RESIDUE MG A 1700
069HC6SOFTWAREG A:858 , G A:869BINDING SITE FOR RESIDUE MG A 1645
070HC7SOFTWAREC A:352BINDING SITE FOR RESIDUE MG A 1701
071HC8SOFTWAREA A:964 , G A:1198 , U A:1199BINDING SITE FOR RESIDUE MG A 1646
072HC9SOFTWAREC A:372 , U A:375 , G A:376 , U A:387BINDING SITE FOR RESIDUE MG A 1702
073IC1SOFTWAREA A:860BINDING SITE FOR RESIDUE MG A 1647
074IC2SOFTWAREG A:410 , A A:431BINDING SITE FOR RESIDUE MG A 1703
075IC3SOFTWAREG A:637 , G A:638BINDING SITE FOR RESIDUE MG A 1648
076IC4SOFTWAREC A:504 , G A:505BINDING SITE FOR RESIDUE MG A 1704
077IC5SOFTWAREG A:885 , G A:886 , MG A:1675BINDING SITE FOR RESIDUE MG A 1649
078IC6SOFTWAREU A:705BINDING SITE FOR RESIDUE MG A 1705
079IC7SOFTWAREG A:775 , G A:776BINDING SITE FOR RESIDUE MG A 1706
080IC8SOFTWAREA A:937 , G A:939BINDING SITE FOR RESIDUE MG A 1651
081IC9SOFTWAREA A:782 , A A:794BINDING SITE FOR RESIDUE MG A 1707
082JC1SOFTWAREG A:933 , C A:934BINDING SITE FOR RESIDUE MG A 1652
083JC2SOFTWAREA A:918 , K A:1764BINDING SITE FOR RESIDUE MG A 1708
084JC3SOFTWAREC A:1200BINDING SITE FOR RESIDUE MG A 1653
085JC4SOFTWAREG A:1053 , G A:1058 , C A:1059 , G A:1198 , U A:1199BINDING SITE FOR RESIDUE MG A 1709
086JC5SOFTWAREG A:1370BINDING SITE FOR RESIDUE MG A 1654
087JC6SOFTWAREC A:1389BINDING SITE FOR RESIDUE MG A 1710
088JC7SOFTWAREG A:627 , G A:628BINDING SITE FOR RESIDUE MG A 1655
089JC8SOFTWAREC A:1501 , A A:1507 , G A:1508BINDING SITE FOR RESIDUE MG A 1711
090JC9SOFTWAREG A:926BINDING SITE FOR RESIDUE MG A 1712
091KC1SOFTWAREG A:21BINDING SITE FOR RESIDUE MG A 1713
092KC2SOFTWAREA A:116 , G A:117 , G A:289BINDING SITE FOR RESIDUE MG A 1714
093KC3SOFTWAREA A:768BINDING SITE FOR RESIDUE MG A 1715
094KC4SOFTWAREC A:526 , 7MG A:527 , A A:913 , A A:914BINDING SITE FOR RESIDUE MG A 1716
095KC5SOFTWAREC A:1054 , G A:1197 , G A:1198BINDING SITE FOR RESIDUE MG A 1717
096KC6SOFTWAREA A:572 , A A:573 , A A:574BINDING SITE FOR RESIDUE MG A 1718
097KC7SOFTWAREG A:944 , G A:945BINDING SITE FOR RESIDUE MG A 1719
098KC8SOFTWAREG A:1053 , C A:1054 , G A:1197 , K A:1781BINDING SITE FOR RESIDUE MG A 1720
099KC9SOFTWAREU A:1095 , G A:1108BINDING SITE FOR RESIDUE MG A 1721
100LC1SOFTWAREC A:1223 , G A:1224BINDING SITE FOR RESIDUE MG A 1722
101LC2SOFTWAREG A:587 , G A:588 , G A:644BINDING SITE FOR RESIDUE MG A 1723
102LC3SOFTWAREC A:979 , C A:980 , U A:981 , G A:1222BINDING SITE FOR RESIDUE MG A 1724
103LC4SOFTWAREC A:972BINDING SITE FOR RESIDUE MG A 1725
104LC5SOFTWAREC A:795 , C A:796BINDING SITE FOR RESIDUE MG A 1726
105LC6SOFTWAREA A:109 , G A:331BINDING SITE FOR RESIDUE MG A 1727
106LC7SOFTWAREC A:328BINDING SITE FOR RESIDUE MG A 1728
107LC8SOFTWAREA A:1110 , C A:1189BINDING SITE FOR RESIDUE MG A 1729
108LC9SOFTWAREC A:1119 , G A:1120BINDING SITE FOR RESIDUE MG A 1730
109MC1SOFTWAREC A:518 , G A:529 , PRO L:48 , ASN L:49BINDING SITE FOR RESIDUE MG A 1731
110MC2SOFTWAREA A:414 , G A:416 , G A:426 , U A:427 , G A:428BINDING SITE FOR RESIDUE MG A 1732
111MC3SOFTWAREG A:1082 , U A:1083BINDING SITE FOR RESIDUE MG A 1733
112MC4SOFTWAREG A:933 , C A:934BINDING SITE FOR RESIDUE MG A 1734
113MC5SOFTWAREU A:1510 , G A:1511 , U A:1512 , U A:1522BINDING SITE FOR RESIDUE MG A 1735
114MC6SOFTWAREG A:691 , U A:692 , ASN K:26 , GLY K:52 , SER K:53BINDING SITE FOR RESIDUE MG A 1736
115MC7SOFTWAREG A:251 , U A:252 , C A:267 , C A:268BINDING SITE FOR RESIDUE MG A 1737
116MC8SOFTWAREU A:788 , U A:789BINDING SITE FOR RESIDUE MG A 1738
117MC9SOFTWAREG A:1224 , A A:1225 , C A:1322 , GLN M:101BINDING SITE FOR RESIDUE MG A 1739
118NC1SOFTWAREU A:603BINDING SITE FOR RESIDUE MG A 1740
119NC2SOFTWAREU A:833 , C A:834 , G A:852 , G A:853BINDING SITE FOR RESIDUE MG A 1741
120NC3SOFTWAREU A:831 , G A:855BINDING SITE FOR RESIDUE MG A 1742
121NC4SOFTWAREG A:107 , A A:325 , G A:326BINDING SITE FOR RESIDUE MG A 1743
122NC5SOFTWAREG A:1417 , G A:1482BINDING SITE FOR RESIDUE MG A 1744
123NC6SOFTWAREU A:1301 , G A:1304BINDING SITE FOR RESIDUE MG A 1745
124NC7SOFTWAREC A:121 , G A:124 , U A:125 , G A:126BINDING SITE FOR RESIDUE MG A 1746
125NC8SOFTWAREG A:61 , U A:62 , G A:105 , LYS T:14BINDING SITE FOR RESIDUE MG A 1747
126NC9SOFTWAREA A:116 , G A:117 , U A:118 , G A:289BINDING SITE FOR RESIDUE MG A 1748
127OC1SOFTWAREA A:572BINDING SITE FOR RESIDUE MG A 1749
128OC2SOFTWAREU A:1073 , G A:1074 , C A:1075 , U A:1083 , G A:1084BINDING SITE FOR RESIDUE MG A 1750
129OC3SOFTWAREC A:1303 , G A:1304 , G A:1305 , ASP U:5BINDING SITE FOR RESIDUE MG A 1751
130OC4SOFTWAREU A:304BINDING SITE FOR RESIDUE K A 1752
131OC5SOFTWAREU A:863BINDING SITE FOR RESIDUE K A 1754
132OC6SOFTWAREG A:895BINDING SITE FOR RESIDUE K A 1755
133OC7SOFTWAREG A:575 , G A:577BINDING SITE FOR RESIDUE K A 1756
134OC8SOFTWAREU A:1090BINDING SITE FOR RESIDUE K A 1757
135OC9SOFTWAREU A:14BINDING SITE FOR RESIDUE K A 1759
136PC1SOFTWAREC A:536 , K A:1763BINDING SITE FOR RESIDUE K A 1760
137PC2SOFTWAREG A:664BINDING SITE FOR RESIDUE K A 1761
138PC3SOFTWAREA A:496 , A A:497BINDING SITE FOR RESIDUE K A 1762
139PC4SOFTWAREU A:512 , U A:534 , A A:535 , K A:1760BINDING SITE FOR RESIDUE K A 1763
140PC5SOFTWAREA A:1394 , MG A:1708BINDING SITE FOR RESIDUE K A 1764
141PC6SOFTWAREG A:475 , MG A:1615BINDING SITE FOR RESIDUE K A 1766
142PC7SOFTWAREG A:557 , G A:558BINDING SITE FOR RESIDUE K A 1767
143PC8SOFTWAREG A:688 , G A:700BINDING SITE FOR RESIDUE K A 1769
144PC9SOFTWAREC A:277 , G A:278BINDING SITE FOR RESIDUE K A 1770
145QC1SOFTWAREG A:231BINDING SITE FOR RESIDUE K A 1771
146QC2SOFTWAREC A:1352BINDING SITE FOR RESIDUE K A 1772
147QC3SOFTWAREG A:927 , G A:928 , MG A:1685BINDING SITE FOR RESIDUE K A 1774
148QC4SOFTWAREG A:1442 , G A:1443BINDING SITE FOR RESIDUE K A 1775
149QC5SOFTWAREC A:806BINDING SITE FOR RESIDUE K A 1778
150QC6SOFTWAREC A:811 , C A:812 , A A:901 , G A:902 , G A:903BINDING SITE FOR RESIDUE K A 1779
151QC7SOFTWAREC A:1054 , U A:1196 , G A:1197 , MG A:1720BINDING SITE FOR RESIDUE K A 1781
152QC8SOFTWAREG A:725BINDING SITE FOR RESIDUE K A 1782
153QC9SOFTWAREGLU C:161BINDING SITE FOR RESIDUE K A 1786
154RC1SOFTWAREALA N:2BINDING SITE FOR RESIDUE MG A 1787
155RC2SOFTWAREHIS B:19 , LYS B:74 , ASP B:166 , ASP B:191 , ASP B:205BINDING SITE FOR RESIDUE MG B 301
156RC3SOFTWARECYS D:9 , CYS D:12 , CYS D:26 , CYS D:31BINDING SITE FOR RESIDUE ZN D 301
157RC4SOFTWAREU A:5 , SER D:83 , LYS D:85 , THR D:89BINDING SITE FOR RESIDUE MG D 302
158RC5SOFTWAREU A:1330 , THR M:20 , ILE M:22 , TYR M:23 , ILE M:25BINDING SITE FOR RESIDUE MG M 201
159RC6SOFTWARECYS N:24 , CYS N:27 , CYS N:40 , CYS N:43BINDING SITE FOR RESIDUE ZN N 101
160RC7SOFTWAREC A:1243 , THR U:8 , ARG U:9 , ARG U:10 , GLY U:11BINDING SITE FOR RESIDUE MG U 101

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4KVB)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 4KVB)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4KVB)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4KVB)

(-) Exons   (0, 0)

(no "Exon" information available for 4KVB)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:RNA  Length:1514
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            
               4kvb A     4 UUGGAGAGUUUGAUCCUGGCUCAGGGUGAACGCUGGCGGCGUGCCUAAGACAUGCAAGUCGUGCGGGCCGCGGGGUUUUACUCCGUGGUCAGCGGCGGACGGGUGAGUAACGCGUGGGUGACCUACCCGGAAGAGGGGGACAACCCGGGGAAACUCGGGCUAAUCCCCCAUGUGGACCCGCCCCUUGGGGUGUGUCCAAAGGGCUUUGCCCGCUUCCGGAUGGGCCCGCGUCCCAUCAGCUAGUUGGUGGGGUAAUGGCCCACCAAGGCGACGACGGGUAGCCGGUCUGAGAGGAUGGCCGGCCACAGGGGCACUGAGACACGGGCCCCACUCCUACGGGAGGCAGCAGUUAGGAAUCUUCCGCAAUGGGCGCAAGCCUGACGGAGCGACGCCGCUUGGAGGAAGAAGCCCUUCGGGGUGUAAACUCCUGAACCCGGGACGAAACCCCCGAGGAGGGGACUGACGGUACCGGGGUAAUAGCGCCGGCCAACUCCGuGCCAGCAGCCgCGGUAAUACGGAGGGCGCGAGCGUUACCCGGAUUCACUGGGCGUAAAGGGCGUGUAGGCGGCCUGGGGCGUCCCAUGUGAAAGACCACGGCUCAACCGUGGGGGAGCGUGGGAUACGCUCAGGCUAGACGGUGGGAGAGGGUGGUGGAAUUCCCGGAGUAGCGGUGAAAUGCGCAGAUACCGGGAGGAACGCCGAUGGCGAAGGCAGCCACCUGGUCCACCCGUGACGCUGAGGCGCGAAAGCGUGGGGAGCAAACCGGAUUAGAUACCCGGGUAGUCCACGCCCUAAACGAUGCGCGCUAGGUCUCUGGGUCUCCUGGGGGCCGAAGCUAACGCGUUAAGCGCGCCGCCUGGGGAGUACGGCCGCAAGGCUGAAACUCAAAGGAAUUGACGGGGGCCCGCACAAGCGGUGGAGCAUGUGGUUUAAUUCGAAgcAACGCGAAGAACCUUACCAGGCCUUGACAUGCUAGGGAACCCGGGUGAAAGCCUGGGGUGCCCCGCGAGGGGAGCCCUAGCACAGGUGCUGCAUGGCCGUCGUCAGCUCGUGCCGUGAGGUGUUGGGUUAAGUCCCGCAACGAGCGCAACCCCCGCCGUUAGUUGCCAGCGGUUCGGCCGGGCACUCUAACGGGACUGCCCGCGAAAGCGGGAGGAAGGAGGGGACGACGUCUGGUCAGCAUGgCCCUUACGGCCUGGGCGACACACGUGCUACAAUGCCCACUACAAAGCGAUGCCACCCGGCAACGGGGAGCUAAUCGCAAAAAGGUGGGCCCAGUUCGGAUUGGGGUCUGCAACCCGACCCCAUGAAGCCGGAAUCGCUAGUAAUCGCGGAUCAGCCAUGCCGCGGUGAAUACGUUCCCGGGCCUUGUACACACcGcCcGUcACGCCAUGGGAGCGGGCUCUACCCGAAGUCGCCGGGAGCCUACGGGCAGGCGCCGAGGGUAGGGCCCGUGACUGGGGCGAAGUCGuAACAAGGUAGCUGUACCGGaaGGUGCGGCUGGAUCACuuUCU  1544
                                    13        23        33        43        53        63      ||75        88    ||  99|      110       120      129A       139       149       159       169       179       189 |||||190I|||    197      |218       228       238       248       258       268       278       288       298       308       318       328       338       348       358       368       378       388       398       408       418       428       438 ||    449       459   ||  479       489  ||   500       510     | 520      |530       540       550       560       570       580       590       600       610       620       630       640       650       660       670       680       690       700       710       720       730       740       750       760       770       780       790       800       810       820       830       840||     856       866       876       886       896       906       916       926       936       946       956       966|      976       986       996      1005      1015      1025     |1031      1041      1051      1061      1071      1081      1091      1101      1111      1121      1131      1141      1151      1161      1172      1182      1192      1202    | 1212      1222      1232      1242      1252      1262      1272      1282      1292      1302      1312      1322      1332      1342      1352     1361A      1371      1381      1391      1401| |  |1411      1421      1431      1441 ||   1453 ||   1466      1476      1486      1496 |    1506      1516 ||   1526      1540|   
                                                                                             70|         84|   93|  99|                         129A                                                          190A|||||190J||           204|                                                                                                                                                                                                                             440|                  463|               492|                   516-PSU    527-7MG                                                                                                                                                                                                                                                                                                                   841|                                                                                                                   966-M2G                             1003A                       1030A|||                                                                                                                                       1169|                                1207-2MG                                                                                                                                                  1361A                                   1400-5MC  |                                1443|     1455|                                   1498-UR3            1518-MA6        1534|||   
                                                                                              73          88    95  101                                                                                        190B|||||190K|            216                                                                                                                                                                                                                              442                   474                494                                                                                                                                                                                                                                                                                                                                                         848                                                                                                                    967-5MC                                                         1030B||                                                                                                                                        1171                                                                                                                                                                                                                                    1402-4OC|                                 1446      1459                                                        1519-MA6        1539||   
                                                                                                                                                                                                                190C|||||190L                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          1030C|                                                                                                                                                                                                                                                                                                                                                                                  1404-5MC                                                                                                                       1540-PSU
                                                                                                                                                                                                                 190D|||||                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              1030D                                                                                                                                                                                                                                                                                                                                                                                     1407-5MC                                                                                                                     1541-PSU
                                                                                                                                                                                                                  190E||||                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            
                                                                                                                                                                                                                   190F|||                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            
                                                                                                                                                                                                                    190G||                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            
                                                                                                                                                                                                                     190H|                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            
                                                                                                                                                                                                                      190I                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            


Chain B from PDB  Type:PROTEIN  Length:235
                                                                                                                                                                                                                                                                             
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..hhhhh....eeee....hhhhhh.eeeee..eeeehhhhhhhhhhhhhhhhhhhhhh...eeee........hhhhhh......ee..........hhhhhhhhhhhhhhhhhhh.hhhhh..hhhhhhhhhhhhhhhhhhhhhhhhh.....eeee.....hhhhhhhhhhh...eeeee..........eeee....hhhhhhhhhhhhhhhhhhhhh............. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
               4kvb B     6 TVKELLEAGVHFGHERKRWNPKFARYIYAERNGIHIIDLQKTMEELERTFRFIEDLAMRGGTILFVGTKKQAQDIVRMEAERAGMPYVNQRWLGGMLTNFKTISQRVHRLEELEALFASPEIEERPKKEQVRLKHELERLQKYLSGFRLLKRLPDAIFVVDPTKEAIAVREARKLFIPVIALADTDSDPDLVDYIIPGNDDAIRSIQLILSRAVDLIIQARGGVVEPSPSYALVQ   240
                                    15        25        35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215       225       235     


Chain C from PDB  Type:PROTEIN  Length:206
                                                                                                                                                                                                                                                
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....hhhhhhh.......ee......hhhhhhhhhhhhhhhhhhhhh...eeee.ee........eeee.hhhhhhh..hhhhhhhhhhhhhhh......eeee......hhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhh...eeeeee..hhhhh........eee..........eeeeee..........eeeeee.... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
               4kvb C     2 GNKIHPIGFRLGITRDWESRWYAGKKQYRHLLLEDQRIRGLLEKELYSAGLARVDIERAADNVAVTVHVAKPGVVIGRGGERIRVLREELAKLTGKNVALNVQEVQNPNLSAPLVAQRVAEQIERRFAVRRAIKQAVQRVMESGAKGAKVIVSGRIGGAEQARTEWAAQGRVPLHTLRANIDYGFALARTTYGVLGVKAYIFLGEV   207
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201      


Chain D from PDB  Type:PROTEIN  Length:208
                                                                                                                                                                                                                                                  
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ......hhhhhhhhh...........hhhhh...................hhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhh..hhhhhhhhhhh.hhhhhhhhh....hhhhhhhhhhh..eee..ee............eeee......hhhhhhhhhhh........eeee....eeee....hhhhh....hhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
               4kvb D     2 GRYIGPVCRLCRREGVKLYLKGERCYSPKCAMERRPYPPGQHGQKRARRPSDYAVRLREKQKLRRIYGISERQFRNLFEEASKKKGVTGSVFLGLLESRLDNVVYRLGFAVSRRQARQLVRHGHITVNGRRVDLPSYRVRPGDEIAVAEKSRNLELIRQNLEAMKGRKVGPWLSLDVEGMKGKFLRLPDREDLALPVNEQLVIEFYSR   209
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201        


Chain E from PDB  Type:PROTEIN  Length:150
                                                                                                                                                                                        
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ..eeeeeeeeeeeeee..eeeeeeeeeeeee....eeeeeeeee.hhhhhhhhhhhhhhhheee...........eeeee..eeeeeee......ee.hhhhhhhhhhhh...eeeeeee..hhhhhhhhhhhhhhh..hhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
               4kvb E     5 DFEEKMILIRRTARMQAGGRRFRFGALVVVGDRQGRVGLGFGKAPEVPLAVQKAGYYARRNMVEVPLQNGTIPHEIEVEFGASKIVLKPAAPGTGVIAGAVPRAILELAGVTDILTKELGSRNPINIAYATMEALRQLRTKADVERLRKG   154
                                    14        24        34        44        54        64        74        84        94       104       114       124       134       144       154


Chain F from PDB  Type:PROTEIN  Length:101
                                                                                                                                       
               SCOP domains ----------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeeeee....hhhhhhhhhhhhhhhhhhh..eeeeeeeeeeeeeeeee..eeeeeeeeeeeeehhhhhhhhhhhhhhh..eeeeeeee.....ee.. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------- Transcript
               4kvb F     1 MRRYEVNIVLNPNLDQSQLALEKEIIQRALENYGARVEKVEELGLRRLAYPIAKDPQGYFLWYQVEMPEDRVNDLARELRIRDNVRRVMVVKSQEPFLANA   101
                                    10        20        30        40        50        60        70        80        90       100 


Chain G from PDB  Type:PROTEIN  Length:155
                                                                                                                                                                                             
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..................hhhhhhhhhhhh....hhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhh...eeeeee....eeeeee..hhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhh..hhhhhhhhhhhhhh..hhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
               4kvb G     2 ARRRRAEVRQLQPDLVYGDVLVTAFINKIMRDGKKNLAARIFYDACKIIQEKTGQEPLKVFKQAVENVKPRMEVRSRRVGGANYQVPMEVSPRRQQSLALRWLVQAANQRPERRAAVRIAHELMDAAEGKGGAVKKKEDVERMAEANRAYAHYRW   156
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151     


Chain H from PDB  Type:PROTEIN  Length:138
                                                                                                                                                                            
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ...hhhhhhhhhhhhhhhh...eeeee.hhhhhhhhhhhhhh....eeeeeee..eeeeeee...................eeee........ee......hhhhhh.eeeeee..eeeehhhhhhhh..eeeeeeee Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------ Transcript
               4kvb H     1 MLTDPIADMLTRIRNATRVYKESTDVPASRFKEEILRILAREGFIKGYERVDVDGKPYLRVYLKYGPRRQGPDPRPEQVIHHIRRISKPGRRVYVGVKEIPRVRRGLGIAILSTSKGVLTDREARKLGVGGELICEVW   138
                                    10        20        30        40        50        60        70        80        90       100       110       120       130        


Chain I from PDB  Type:PROTEIN  Length:127
                                                                                                                                                                 
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eee..ee..eeeeeeeee....eee...hhhhhhh.hhhhhhhhhhhhhh.....eeeeeeee..hhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhh............................ Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------- Transcript
               4kvb I     2 EQYYGTGRRKEAVARVFLRPGNGKVTVNGQDFNEYFQGLVRAVAALEPLRAVDALGRFDAYITVRGGGKSGQIDAIKLGIARALVQYNPDYRAKLKPLGFLTRDARVVERKKYGKHKARRAPQYSKR   128
                                    11        21        31        41        51        61        71        81        91       101       111       121       


Chain J from PDB  Type:PROTEIN  Length:98
                                                                                                                                    
               SCOP domains -------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeee.hhhhhhhhhhhhhhhhhh.............eeeee...............eeeeeeeeeeee.....hhhhh..........eeeee. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------- Transcript
               4kvb J     3 KIRIKLRGFDHKTLDASAQKIVEAARRSGAQVSGPIPLPTRVRRFTVIRGPFKHKDSREHFELRTHNRLVDIINPNRKTIEQLMTLDLPTGVEIEIKT   100
                                    12        22        32        42        52        62        72        82        92        


Chain K from PDB  Type:PROTEIN  Length:119
                                                                                                                                                         
               SCOP domains ----------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....eeeeeeee....eeeeee.....eeeeee.......hhhhhhhhhhhhhhhhhhhhhhh....eeeeeee....hhhhhhhhhhh...eeeeeee...........hhhhh... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------- Transcript
               4kvb K    11 KRQVASGRAYIHASYNNTIVTITDPDGNPITWSSGGVIGYKGSRKGTPYAAQLAALDAAKKAMAYGMQSVDVIVRGTGAGREQAIRALQASGLQVKSIVDDTPVPHNGCRPKKKFRKAS   129
                                    20        30        40        50        60        70        80        90       100       110       120         


Chain L from PDB  Type:PROTEIN  Length:124
                                                                                                                                                              
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhh..................eeeeeeeeeeee.........eeeeeeee....eeeee............eeeee.........eeeee............................ Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------- Transcript
               4kvb L     5 PTINQLVRKGREKVRKKSKVPALKGAPFRRGVCTVVRTVTPKKPNSALRKVAKVRLTSGYEVTAYIPGEGHNLQEHSVVLIRGGRVKdLPGVRYHIVRGVYDAAGVKDRKKSRSKYGTKKPKEA   128
                                    14        24        34        44        54        64        74        84       |94       104       114       124    
                                                                                                                  92-0TD                                


Chain M from PDB  Type:PROTEIN  Length:125
                                                                                                                                                               
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ............hhhhhhhh....hhhhhhhhhhhhh..........hhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhh.hhhhhhhhhh...........hhhhhh.............. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------- Transcript
               4kvb M     2 ARIAGVEIPRNKRVDVALTYIYGIGKARAKEALEKTGINPATRVKDLTEAEVVRLREYVENTWKLEGELRAEVAANIKRLMDIGCYRGLRHRRGLPVRGQRTRTNARTRKGPRKTVAGKKKAPRK   126
                                    11        21        31        41        51        61        71        81        91       101       111       121     


Chain N from PDB  Type:PROTEIN  Length:60
                                                                                              
               SCOP domains ------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------ Pfam domains
         Sec.struct. author .hhhhhhh..............................hhhhhhhhhhhh....eee... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------ Transcript
               4kvb N     2 ARKALIEKAKRTPKFKVRAYTRCVRCGRARSVYRFFGLCRICLRELAHKGQLPGVRKASW    61
                                    11        21        31        41        51        61


Chain O from PDB  Type:PROTEIN  Length:88
                                                                                                                          
               SCOP domains ---------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..hhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------- Transcript
               4kvb O     2 PITKEEKQKVIQEFARFPGDTGSTEVQVALLTLRINRLSEHLKVHKKDHHSHRGLLMMVGQRRRLLRYLQREDPERYRALIEKLGIRG    89
                                    11        21        31        41        51        61        71        81        


Chain P from PDB  Type:PROTEIN  Length:83
                                                                                                                     
               SCOP domains ----------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeee........eeeeeee..........eeeeee.........eeehhhhhhhhhhh..eehhhhhhhhhhh...... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------- Transcript
               4kvb P     1 MVKIRLARFGSKHNPHYRIVVTDARRKRDGKYIEKIGYYDPRKTTPDWLKVDVERARYWLSVGAQPTDTARRLLRQAGVFRQE    83
                                    10        20        30        40        50        60        70        80   


Chain R from PDB  Type:PROTEIN  Length:73
                                                                                                           
               SCOP domains ------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .............ee.....hhhhhhhhh.......hhhhhh.hhhhhhhhhhhhhhhhhh............ Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------- Transcript
               4kvb R    16 PSRKAKVKATLGEFDLRDYRNVEVLKRFLSETGKILPRRRTGLSAKEQRILAKTIKRARILGLLPFTEKLVRK    88
                                    25        35        45        55        65        75        85   


Chain S from PDB  Type:PROTEIN  Length:80
                                                                                                                  
               SCOP domains -------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..........hhhhhhhhhhhhhhh.....ee.......hhhhh..eeeee....eeeee.hhhhh..hhhhhh...... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------- Transcript
               4kvb S     2 PRSLKKGVFVDDHLLEKVLELNAKGEKRLIKTWSRRSTIVPEMVGHTIAVYNGKQHVPVYITENMVGHKLGEFAPTRTYR    81
                                    11        21        31        41        51        61        71        81


Chain T from PDB  Type:PROTEIN  Length:99
                                                                                                                                     
               SCOP domains --------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhh............. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------- Transcript
               4kvb T     8 RNLSALKRHRQSLKRRLRNKAKKSAIKTLSKKAVQLAQEGKAEEALKIMRKAESLIDKAAKGSTLHKNAAARRKSRLMRKVRQLLEAAGAPLIGGGLSA   106
                                    17        27        37        47        57        67        77        87        97         


Chain U from PDB  Type:PROTEIN  Length:24
                                                          
               SCOP domains ------------------------ SCOP domains
               CATH domains ------------------------ CATH domains
               Pfam domains ------------------------ Pfam domains
         Sec.struct. author ......hhhhhhhhh......... Sec.struct. author
                 SAPs(SNPs) ------------------------ SAPs(SNPs)
                    PROSITE ------------------------ PROSITE
                 Transcript ------------------------ Transcript
               4kvb U     2 GKGDRRTRRGKIWRGTYGKYRPRK    25
                                    11        21
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4KVB)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4KVB)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4KVB)

(-) Gene Ontology  (13, 140)

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  4kvb
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  RS10_THET2 | P62653
    Comparative Protein Structure Models: ModBase
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  RS11_THET2 | P62654
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  RS12_THET2 | P61941
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  RS13_THET2 | P62655
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  RS14Z_THET2 | P62656
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    Protein-protein Interaction: DIP
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  RS15_THET2 | P62657
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    Protein-protein Interaction: DIP
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  RS16_THET2 | P62238
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    Protein-protein Interaction: DIP
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  RS18_THET2 | P62659
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  RS19_THET2 | P62660
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  RS20_THET2 | P62661
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  RS2_THET2 | P62662
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  RS3_THET2 | P62663
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  RS4_THET2 | P62664
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  RS5_THET2 | P62665
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  RS6_THET2 | P62666
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  RS7_THET2 | P62667
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  RS8_THET2 | P62668
    Comparative Protein Structure Models: ModBase
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    Protein-protein Interaction: DIP
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  RS9_THET2 | P62669
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    Protein-protein Interaction: DIP
    Sequence, Family and Domain Information: InterPro | Pfam | SMART | UniProtKB/SwissProt
  RSHX_THET2 | P62613
    Comparative Protein Structure Models: ModBase
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Access by UniProt ID/Accession number
  RS10_THET2 | P62653
    Protein Disorder Prediction: DisEMBL | FoldIndex | GLOBPLOT (for more information see DisProt)
  RS11_THET2 | P62654
    Protein Disorder Prediction: DisEMBL | FoldIndex | GLOBPLOT (for more information see DisProt)
  RS12_THET2 | P61941
    Protein Disorder Prediction: DisEMBL | FoldIndex | GLOBPLOT (for more information see DisProt)
  RS13_THET2 | P62655
    Protein Disorder Prediction: DisEMBL | FoldIndex | GLOBPLOT (for more information see DisProt)
  RS14Z_THET2 | P62656
    Protein Disorder Prediction: DisEMBL | FoldIndex | GLOBPLOT (for more information see DisProt)
  RS15_THET2 | P62657
    Protein Disorder Prediction: DisEMBL | FoldIndex | GLOBPLOT (for more information see DisProt)
  RS16_THET2 | P62238
    Protein Disorder Prediction: DisEMBL | FoldIndex | GLOBPLOT (for more information see DisProt)
  RS18_THET2 | P62659
    Protein Disorder Prediction: DisEMBL | FoldIndex | GLOBPLOT (for more information see DisProt)
  RS19_THET2 | P62660
    Protein Disorder Prediction: DisEMBL | FoldIndex | GLOBPLOT (for more information see DisProt)
  RS20_THET2 | P62661
    Protein Disorder Prediction: DisEMBL | FoldIndex | GLOBPLOT (for more information see DisProt)
  RS2_THET2 | P62662
    Protein Disorder Prediction: DisEMBL | FoldIndex | GLOBPLOT (for more information see DisProt)
  RS3_THET2 | P62663
    Protein Disorder Prediction: DisEMBL | FoldIndex | GLOBPLOT (for more information see DisProt)
  RS4_THET2 | P62664
    Protein Disorder Prediction: DisEMBL | FoldIndex | GLOBPLOT (for more information see DisProt)
  RS5_THET2 | P62665
    Protein Disorder Prediction: DisEMBL | FoldIndex | GLOBPLOT (for more information see DisProt)
  RS6_THET2 | P62666
    Protein Disorder Prediction: DisEMBL | FoldIndex | GLOBPLOT (for more information see DisProt)
  RS7_THET2 | P62667
    Protein Disorder Prediction: DisEMBL | FoldIndex | GLOBPLOT (for more information see DisProt)
  RS8_THET2 | P62668
    Protein Disorder Prediction: DisEMBL | FoldIndex | GLOBPLOT (for more information see DisProt)
  RS9_THET2 | P62669
    Protein Disorder Prediction: DisEMBL | FoldIndex | GLOBPLOT (for more information see DisProt)
  RSHX_THET2 | P62613
    Protein Disorder Prediction: DisEMBL | FoldIndex | GLOBPLOT (for more information see DisProt)

 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        RS10_THET2 | P62653: 4v4j 4v63 4v67 4v7p 4v83 4v84 4v9j 4v9k 4v9l 4v9m 4v9n 4v9q 4w29 4xej 5j4d
        RS11_THET2 | P62654: 4v4i 4v4j 4v63 4v67 4v7p 4v83 4v84 4v9j 4v9k 4v9l 4v9m 4v9n 4v9q 4w29 4xej 5j4d
        RS12_THET2 | P61941: 2r1g 4v4i 4v4j 4v63 4v67 4v7p 4v83 4v84 4v9j 4v9k 4v9l 4v9m 4v9n 4v9q 4w29 4xej 5j4d
        RS13_THET2 | P62655: 2r1g 4v4i 4v4j 4v63 4v67 4v7p 4v83 4v84 4v9j 4v9k 4v9l 4v9m 4v9n 4v9q 4w29 4xej 5j4d
        RS14Z_THET2 | P62656: 4v4j 4v63 4v67 4v7p 4v83 4v84 4v9j 4v9k 4v9l 4v9m 4v9n 4v9q 4w29 4xej 5j4d
        RS15_THET2 | P62657: 4v4g 4v4i 4v4j 4v63 4v67 4v7p 4v83 4v84 4v9j 4v9k 4v9l 4v9m 4v9n 4v9q 4w29 4xej 5j4d
        RS16_THET2 | P62238: 4v4i 4v4j 4v63 4v67 4v7p 4v83 4v84 4v9j 4v9k 4v9l 4v9m 4v9n 4v9q 4w29 4xej 5j4d
        RS18_THET2 | P62659: 4v4i 4v4j 4v5l 4v63 4v67 4v7p 4v83 4v84 4v9j 4v9k 4v9l 4v9m 4v9n 4v9q 4w29 4xej 5j4d
        RS19_THET2 | P62660: 4v4g 4v4i 4v4j 4v63 4v67 4v7p 4v83 4v84 4v9j 4v9k 4v9l 4v9m 4v9n 4v9q 4w29 4xej 5j4d
        RS20_THET2 | P62661: 1twt 2e5l 2f4v 2uxb 2uxc 2uxd 2vqe 2vqf 2zm6 3t1h 3t1y 4v4g 4v4i 4v4j 4v63 4v67 4v7p 4v83 4v84 4v9j 4v9k 4v9l 4v9m 4v9n 4v9q 4w29 4xej 5j4d
        RS2_THET2 | P62662: 4v4g 4v4i 4v4j 4v63 4v67 4v7p 4v83 4v84 4v9j 4v9k 4v9l 4v9m 4v9n 4v9q 4w29 4xej 5j4d
        RS3_THET2 | P62663: 4v4i 4v4j 4v63 4v67 4v7p 4v83 4v84 4v9j 4v9k 4v9l 4v9m 4v9n 4v9q 4w29 4xej 5j4d
        RS4_THET2 | P62664: 4v4i 4v4j 4v63 4v67 4v7p 4v83 4v84 4v9j 4v9k 4v9l 4v9m 4v9n 4v9q 4w29 4xej 5j4d
        RS5_THET2 | P62665: 4v4i 4v4j 4v63 4v67 4v7p 4v83 4v84 4v9j 4v9k 4v9l 4v9m 4v9n 4v9q 4w29 4xej 5j4d
        RS6_THET2 | P62666: 4v4i 4v4j 4v63 4v67 4v7p 4v83 4v84 4v9j 4v9k 4v9l 4v9m 4v9n 4v9q 4w29 4xej 5j4d
        RS7_THET2 | P62667: 4v4i 4v4j 4v5l 4v63 4v67 4v7p 4v83 4v84 4v9j 4v9k 4v9l 4v9m 4v9n 4v9q 4w29 4xej 5j4d
        RS8_THET2 | P62668: 1xmo 1xmq 1xnq 1xnr 4v4i 4v4j 4v63 4v67 4v7p 4v83 4v84 4v9j 4v9k 4v9l 4v9m 4v9n 4v9q 4w29 4xej 5j4d
        RS9_THET2 | P62669: 1i94 1i96 1twt 2e5l 2f4v 2r1g 2uua 2uxb 2uxc 2uxd 2vqe 2vqf 2zm6 3t1h 3t1y 4v4i 4v4j 4v51 4v5a 4v5c 4v5d 4v63 4v67 4v7p 4v83 4v84 4v9j 4v9k 4v9l 4v9m 4v9n 4v9q 4w29 4xej 5j4d
        RSHX_THET2 | P62613: 4v4i 4v4j 4v63 4v67 4v7p 4v83 4v84 4v9n 4v9q 4xej 5j4d

(-) Related Entries Specified in the PDB File

4ji5 CRYSTAL STRUCTURE OF 30S RIBOSOMAL SUBUNIT FROM THERMUS THERMOPHILUS