4I69 - JenaLib

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Biological Unit 2 (Jmol Viewer)

Biological Unit 3 (Jmol Viewer)

Title :   CRYSTAL STRUCTURE OF THE K463A MUTANT OF THE RRM DOMAIN OF RNA HELICASE HERA FROM T. THERMOPHILUS

Authors :   M. G. Rudolph, D. Klostermeier

Date :   29 Nov 12 (Deposition) - 24 Apr 13 (Release) - 26 Nov 14 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   1.79

Chains :   Asym. Unit : A,B,C
Biol. Unit 1: A  (1x)
Biol. Unit 2: B  (1x)
Biol. Unit 3: C  (1x)

Keywords :   Rna Recognition Motif, Atp Binding, Nucleotide Binding, Rna Binding Protein, Dead Box Protein, Hydrolase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   L. Steimer, J. P. Wurm, M. H. Linden, M. G. Rudolph, J. Wohnert, D. Klostermeier
Recognition Of Two Distinct Elements In The Rna Substrate B The Rna-Binding Domain Of The T. Thermophilus Dead Box Helicase Hera.
Nucleic Acids Res. V. 41 6259 2013
PubMed-ID: 23625962 | Reference-DOI: 10.1093/NAR/GKT323

Molecule 1 - HEAT RESISTANT RNA DEPENDENT ATPASE
	Chains	:	A, B, C
	EC Number	:	3.6.4.13
	Engineered	:	YES
	Expression System	:	ESCHERICHIA COLI
	Expression System Taxid	:	562
	Fragment	:	RRM DOMAIN (UNP RESIDUES 431-517)
	Gene	:	TT_C1895
	Mutation	:	YES
	Organism Scientific	:	THERMUS THERMOPHILUS
	Organism Taxid	:	274
	Synonym	:	HERA RNA HELICASE

		1	2	3
Asymmetric Unit	:	A	B	C
Biological Unit 1 (1x)	:	A
Biological Unit 2 (1x)	:		B
Biological Unit 3 (1x)	:			C

Summary Information (see also Sequences/Alignments below)

Asymmetric Unit (1, 4)

No.	Name	Count	Type	Full Name
1	CL	4	Ligand/Ion	CHLORIDE ION

Biological Unit 1 (0, 0)

No.	Name	Count	Type	Full Name
1	CL	-1	Ligand/Ion	CHLORIDE ION

Biological Unit 2 (0, 0)

No.	Name	Count	Type	Full Name
1	CL	-1	Ligand/Ion	CHLORIDE ION

Biological Unit 3 (0, 0)

No.	Name	Count	Type	Full Name
1	CL	-1	Ligand/Ion	CHLORIDE ION

Asymmetric Unit (4, 4)

No.	Name	Evidence	Residues	Description
1	AC1	SOFTWARE	ARG A:480 , GLU B:460	BINDING SITE FOR RESIDUE CL A 601
2	AC2	SOFTWARE	ARG B:426 , ARG B:449 , HOH B:723	BINDING SITE FOR RESIDUE CL B 601
3	AC3	SOFTWARE	ARG B:493	BINDING SITE FOR RESIDUE CL B 602
4	AC4	SOFTWARE	ARG A:487 , ARG C:444 , ARG C:503	BINDING SITE FOR RESIDUE CL C 601

(no "SS Bond" information available for 4I69)

(no "Cis Peptide Bond" information available for 4I69)

(no "SAP(SNP)/Variant" information available for 4I69)

(no "PROSITE Motif" information available for 4I69)

(no "Exon" information available for 4I69)

Asymmetric Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
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Chain A from PDB  Type:PROTEIN  Length:79
                                                                                                               
               SCOP domains ------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...........eeeeee....hhhhhhhhhhhh...eeeeeee..eeeeee...........eeee............. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------- Transcript
                 4i69 A 425 ERSLLTGEEGWRTYKATGPRLSLPRLVALLKGQGLEVGAVAEAEGGFYVDLRPEARPEVAGLRLEPARRVEGLLEIPSR 503
                                   434       444       454       464       474       484       494

Chain B from PDB  Type:PROTEIN  Length:87
                                                                                                                       
               SCOP domains --------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ............eeeeee....hhhhhhhhhhh....eeeeeee..eeeeee...........eeee.................... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------- Transcript
                 4i69 B 424 AERSLLTGEEGWRTYKATGPRLSLPRLVALLKGQGLEVGAVAEAEGGFYVDLRPEARPEVAGLRLEPARRVEGLLEIPSRTRRPARA 510
                                   433       443       453       463       473       483       493       503

Chain C from PDB  Type:PROTEIN  Length:86
                                                                                                                      
               SCOP domains -------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...........eeeeee....hhhhhhhhhhh....eeeeeee..eeeeee...........eeee.................... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------- Transcript
                 4i69 C 425 ERSLLTGEEGWRTYKATGPRLSLPRLVALLKGQGLEVGAVAEAEGGFYVDLRPEARPEVAGLRLEPARRVEGLLEIPSRTRRPARA 510
                                   434       444       454       464       474       484       494       504

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	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

(no "SCOP Domain" information available for 4I69)

(no "CATH Domain" information available for 4I69)

(no "Pfam Domain" information available for 4I69)

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		AC4	[ RasMol ]	+environment [ RasMol ]

	Cis Peptide Bonds
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Biological Units
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		Biological Unit 1	[ Jena3D ]
		Biological Unit 2	[ Jena3D ]
		Biological Unit 3	[ Jena3D ]

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	4i69
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	3.6.4.13
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Description

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Ligands, Modified Residues, Ions (1, 4)

Sites (4, 4)

SS Bonds (0, 0)

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Gene Ontology (5, 5)

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