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(-) Description

Title :  STRUCTURE OF FOCAL ADHESION KINASE CATALYTIC DOMAIN IN COMPLEX WITH AN ALLOSTERIC BINDING PYRAZOLOBENZOTHIAZINE COMPOUND.
 
Authors :  R. J. Skene, D. J. Hosfield
Date :  27 Nov 12  (Deposition) - 06 Feb 13  (Release) - 24 Apr 13  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.75
Chains :  Asym./Biol. Unit :  A
Keywords :  Phosphorylated On Tyrosines, Localized To Focal Adhesions, Transferase-Transferase Inhibitor Complex (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  N. Tomita, Y. Hayashi, S. Suzuki, Y. Oomori, Y. Aramaki, Y. Matsushita M. Iwatani, H. Iwata, A. Okabe, Y. Awazu, O. Isono, R. J. Skene, D. J. Hosfield, H. Miki, T. Kawamoto, A. Hori, A. Baba
Structure-Based Discovery Of Cellular-Active Allosteric Inhibitors Of Fak.
Bioorg. Med. Chem. Lett. V. 23 1779 2013
PubMed-ID: 23414845  |  Reference-DOI: 10.1016/J.BMCL.2013.01.047

(-) Compounds

Molecule 1 - FOCAL ADHESION KINASE 1
    Chains: A
    EC Number: 2.7.10.2
    Engineered: YES
    Expression System: SPODOPTERA FRUGIPERDA
    Expression System Taxid: 7108
    Fragment: KINASE DOMAIN: UNP RESIDUES 411-686
    Gene: PTK2, FAK, FAK1
    Organism Common: HUMAN
    Organism Scientific: HOMO SAPIENS
    Organism Taxid: 9606
    Synonym: FADK 1, FOCAL ADHESION KINASE-RELATED NONKINASE, FRNK, PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT 71, PPP1R71, PROTEIN- TYROSINE KINASE 2, P125FAK, PP125FAK

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 2)

Asymmetric/Biological Unit (2, 2)
No.NameCountTypeFull Name
11BR1Ligand/IonN-(4-TERT-BUTYLBENZYL)-1,5-DIMETHYL-1,5-DIHYDROPYRAZOLO[4,3-C][2,1]BENZOTHIAZIN-8-AMINE 4,4-DIOXIDE
2IPA1Ligand/IonISOPROPYL ALCOHOL

(-) Sites  (2, 2)

Asymmetric Unit (2, 2)
No.NameEvidenceResiduesDescription
1AC1SOFTWARETRP A:606 , VAL A:610 , PHE A:623 , ILE A:635 , ARG A:640 , LEU A:641 , TRP A:659 , HOH A:1022BINDING SITE FOR RESIDUE IPA A 701
2AC2SOFTWAREMET A:475 , VAL A:484 , LEU A:534 , ARG A:550 , ASN A:551 , LEU A:562 , GLY A:563 , ASP A:564 , ASP A:604 , MET A:607 , PHE A:608BINDING SITE FOR RESIDUE 1BR A 702

(-) SS Bonds  (1, 1)

Asymmetric/Biological Unit
No.Residues
1A:459 -A:456

(-) Cis Peptide Bonds  (1, 1)

Asymmetric/Biological Unit
No.Residues
1Asn A:493 -Pro A:494

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4I4F)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4I4F)

(-) Exons   (0, 0)

(no "Exon" information available for 4I4F)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:255
                                                                                                                                                                                                                                                                                               
               SCOP domains d4i4fa_ A: Focal adhesion kinase 1 (fak)                                                                                                                                                                                                                        SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...hhh.eeeeeeeeee..eeeeeeee....eeeeeee.....hhhhhhhhhhhhhhh..........eeeee.....eeeee.....hhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhh.....hhhhheeeeee..eeeee..ee...hhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhh.........hhhhhhhhhhh..........hhhhhhhhhhhh..hhhhh.hhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4i4f A 415 YEIQRERIELGRCIGEGQFGDVHQGIYMSPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEEKAQ 686
                                   424       434       447       457       467       477       487       497       507       517       527       537       547       557       567||     591       601       611       621       631       641       651       661       671       681     
                                                      443|                                                                                                                      568|                                                                                                       
                                                       447                                                                                                                       583
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 1)

Asymmetric/Biological Unit
(-)
Class: Alpha and beta proteins (a+b) (23004)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4I4F)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4I4F)

(-) Gene Ontology  (89, 89)

Asymmetric/Biological Unit(hide GO term definitions)

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  FAK1_HUMAN | Q05397
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        FAK1_HUMAN | Q05397: 1k04 1k05 1mp8 1ow6 1ow7 1ow8 2etm 2ijm 3b71 3bz3 3pxk 3s9o 4ebv 4ebw 4gu6 4gu9 4i4e 4k8a 4k9y 4kab 4kao 4ny0 4q9s

(-) Related Entries Specified in the PDB File

4ebv 4ebw 4i4e