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(-) Description

Title :  STRUCTURE OF FOCAL ADHESION KINASE CATALYTIC DOMAIN IN COMPLEX WITH NOVEL ALLOSTERIC INHIBITOR
 
Authors :  M. Iwatani, H. Iwata, A. Okabe, R. J. Skene, N. Tomita, Y. Hayashi, Y. Ara D. J. Hosfield, A. Hori, A. Baba, H. Miki
Date :  25 Mar 12  (Deposition) - 25 Jul 12  (Release) - 27 Mar 13  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.65
Chains :  Asym./Biol. Unit :  A
Keywords :  Kinase Domain, Allosteric Inhibitor, Transferase-Transferase Inhibitor Complex (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  M. Iwatani, H. Iwata, A. Okabe, R. J. Skene, N. Tomita, Y. Hayashi, Y. Aramaki, D. J. Hosfield, A. Hori, A. Baba, H. Miki
Discovery And Characterization Of Novel Allosteric Fak Inhibitors.
Eur. J. Med. Chem. V. 61 49 2013
PubMed-ID: 22819505  |  Reference-DOI: 10.1016/J.EJMECH.2012.06.035

(-) Compounds

Molecule 1 - FOCAL ADHESION KINASE 1
    Chains: A
    EC Number: 2.7.10.2
    Engineered: YES
    Expression System: SPODOPTERA FRUGIPERDA
    Expression System Common: FALL ARMYWORM
    Expression System Taxid: 7108
    Fragment: UNP RESIDUES 411-686
    Gene: PTK2, FAK, FAK1
    Organism Common: HUMAN
    Organism Scientific: HOMO SAPIENS
    Organism Taxid: 9606
    Synonym: FADK 1, FOCAL ADHESION KINASE-RELATED NONKINASE, FRNK, PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT 71, PPP1R71, PROTEIN- TYROSINE KINASE 2, P125FAK, PP125FAK

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 1)

Asymmetric/Biological Unit (1, 1)
No.NameCountTypeFull Name
10PF1Ligand/Ion1-ETHYL-8-(4-ETHYLPHENYL)-5-METHYL-1,5-DIHYDROPYRAZOLO[4,3-C][2,1]BENZOTHIAZINE 4,4-DIOXIDE

(-) Sites  (1, 1)

Asymmetric Unit (1, 1)
No.NameEvidenceResiduesDescription
1AC1SOFTWARELEU A:534 , ARG A:550 , ASN A:551 , GLY A:563 , ASP A:604 , MET A:607BINDING SITE FOR RESIDUE 0PF A 700

(-) SS Bonds  (1, 1)

Asymmetric/Biological Unit
No.Residues
1A:456 -A:459

(-) Cis Peptide Bonds  (1, 1)

Asymmetric/Biological Unit
No.Residues
1Asn A:493 -Pro A:494

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4EBW)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4EBW)

(-) Exons   (0, 0)

(no "Exon" information available for 4EBW)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
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SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:259
                                                                                                                                                                                                                                                                                                   
               SCOP domains d4ebwa_ A: Focal adhesion kinase 1 (fak)                                                                                                                                                                                                                            SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhh.hhh.eeeeeeeee....eeeeeee.....eeeeee......hhhhhhhhhhhhhhhhh........eeeee.....eeeee.....hhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhh.....hhhhheeeeee..eeeee......hhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhh..........hhhhhhhhhh..........hhhhhhhhhhhh........hhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4ebw A 411 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSNPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEEKAQ 686
                                   420       430       440  ||   452       462       472       482       492       502       512       522       532       542       552       562    || 587       597       607       617       627       637       647       657       667       677         
                                                          443|                                                                                                                      567|                                                                                                       
                                                           446                                                                                                                       583
   Legend:   → Mismatch (orange background)
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 1)

Asymmetric/Biological Unit
(-)
Class: Alpha and beta proteins (a+b) (23004)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4EBW)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4EBW)

(-) Gene Ontology  (89, 89)

Asymmetric/Biological Unit(hide GO term definitions)

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  4ebw
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  FAK1_HUMAN | Q05397
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  2.7.10.2
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        FAK1_HUMAN | Q05397: 1k04 1k05 1mp8 1ow6 1ow7 1ow8 2etm 2ijm 3b71 3bz3 3pxk 3s9o 4ebv 4gu6 4gu9 4i4e 4i4f 4k8a 4k9y 4kab 4kao 4ny0 4q9s

(-) Related Entries Specified in the PDB File

4ebv