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(-) Description

Title :  CRYSTAL STRUCTURE OF THE HUMAN C3A DESARG ANAPHYLATOXIN
 
Authors :  G. Bajic, L. Yatime, G. R. Andersen
Date :  08 Nov 12  (Deposition) - 12 Dec 12  (Release) - 13 Feb 13  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.60
Chains :  Asym./Biol. Unit :  A
Keywords :  Complement System, Anaphylatoxins, Inflammation, C3A, C3A Desarg, Innate Immunity, Four-Helix-Bundle, C5A, C5A Desarg, Immune System (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  G. Bajic, L. Yatime, A. Klos, G. R. Andersen
Human C3A And C3A Desarg Anaphylatoxins Have Conserved Structures, In Contrast To C5A And C5A Desarg.
Protein Sci. V. 22 204 2013
PubMed-ID: 23184394  |  Reference-DOI: 10.1002/PRO.2200

(-) Compounds

Molecule 1 - COMPLEMENT C3
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PET32A
    Expression System Strain: SHUFFLE T7
    Expression System Taxid: 562
    Expression System Vector Type: PLASMID
    Gene: C3, CPAMD1
    Organism Common: HUMAN
    Organism Scientific: HOMO SAPIENS
    Organism Taxid: 9606
    Synonym: C3 AND PZP-LIKE ALPHA-2-MACROGLOBULIN DOMAIN-CONTAINING PROTEIN 1, COMPLEMENT C3 BETA CHAIN, COMPLEMENT C3 ALPHA CHAIN, C3A ANAPHYLATOXIN, ACYLATION STIMULATING PROTEIN, ASP, C3ADESARG, COMPLEMENT C3B ALPHA' CHAIN, COMPLEMENT C3C ALPHA' CHAIN FRAGMENT 1, COMPLEMENT C3DG FRAGMENT, COMPLEMENT C3G FRAGMENT, COMPLEMENT C3D FRAGMENT, COMPLEMENT C3F FRAGMENT, COMPLEMENT C3C ALPHA' CHAIN FRAGMENT 2

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 1)

Asymmetric/Biological Unit (1, 1)
No.NameCountTypeFull Name
1SO41Ligand/IonSULFATE ION

(-) Sites  (1, 1)

Asymmetric Unit (1, 1)
No.NameEvidenceResiduesDescription
1AC1SOFTWARETHR A:732 , ARG A:735 , HOH A:903 , HOH A:905BINDING SITE FOR RESIDUE SO4 A 801

(-) SS Bonds  (3, 3)

Asymmetric/Biological Unit
No.Residues
1A:693 -A:720
2A:694 -A:727
3A:707 -A:728

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 4HWJ)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4HWJ)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4HWJ)

(-) Exons   (0, 0)

(no "Exon" information available for 4HWJ)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
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SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:75
                                                                                                           
               SCOP domains --------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhhhhhhhhhhh.........hhhhh....hhhhhhhhhhhhhhhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------- Transcript
                 4hwj A 673 VQLTEKRMDKVGKYPKELRKCCEDGMRENPMRFSCQRRTRFISLGEACKKVFLDCCNYITELRRQHARASHLGLA 747
                                   682       692       702       712       722       732       742
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 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4HWJ)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4HWJ)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4HWJ)

(-) Gene Ontology  (47, 47)

Asymmetric/Biological Unit(hide GO term definitions)

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        CO3_HUMAN | P01024: 1c3d 1ghq 1w2s 2a73 2a74 2gox 2i07 2ice 2icf 2noj 2qki 2wii 2win 2wy7 2wy8 2xqw 2xwb 2xwj 3d5r 3d5s 3g6j 3l3o 3l5n 3nms 3oed 3ohx 3oxu 3rj3 3t4a 4hw5 4i6o 4m76 4ont 4zh1 5fo7 5fo8 5fo9 5foa 5fob 5m6w 5o32 5o35

(-) Related Entries Specified in the PDB File

4hw5