Show PDB file:   
         Plain Text   HTML   (compressed file size)
QuickSearch:   
by PDB,NDB,UniProt,PROSITE Code or Search Term(s)  
(-)Asymmetric Unit
(-)Asym. Unit - sites
(-)Biological Unit 1
(-)Biol. Unit 1 - sites
(-)Biological Unit 2
(-)Biological Unit 3
(-)Biological Unit 4
collapse expand < >
Image Asymmetric Unit
Asymmetric Unit  (Jmol Viewer)
Image Asym. Unit - sites
Asym. Unit - sites  (Jmol Viewer)
Image Biological Unit 1
Biological Unit 1  (Jmol Viewer)
Image Biol. Unit 1 - sites
Biol. Unit 1 - sites  (Jmol Viewer)
Image Biological Unit 2
Biological Unit 2  (Jmol Viewer)
Image Biological Unit 3
Biological Unit 3  (Jmol Viewer)
Image Biological Unit 4
Biological Unit 4  (Jmol Viewer)

(-) Description

Title :  CRYSTAL STRUCTURE OF MANDELATE RACEMASE/MUCONATE LACTONIZING ENZYME (EFI TARGET:502127)
 
Authors :  J. Kim, R. Toro, R. Bhosle, N. F. Al Obaidi, L. L. Morisco, S. R. Wasserma S. Sojitra, E. Washington, A. Scott Glenn, S. Chowdhury, B. Evans, J. M. Stead, B. Hillerich, J. Love, R. D. Seidel, H. J. Imker, J. A. Gerlt, S Enzyme Function Initiative (Efi)
Date :  21 Sep 12  (Deposition) - 10 Oct 12  (Release) - 14 Nov 12  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.09
Chains :  Asym. Unit :  A,B,C,D,E,F
Biol. Unit 1:  A,B,C,D,E,F  (1x)
Biol. Unit 2:  A,B  (1x)
Biol. Unit 3:  C,D  (1x)
Biol. Unit 4:  E,F  (1x)
Keywords :  Structural Genomics, Enzyme Function Initiative, Tim Barrel, Racemase/Enolase, Isomerase (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  J. Kim, R. Toro, R. Bhosle, N. F. Al Obaidi, L. L. Morisco, S. R. Wasserman, S. Sojitra, E. Washington, A. Scott Glenn, S. Chowdhury, B. Evans, J. Hammonds, M. Stead, B. Hillerich, J. Love, R. D. Seidel, H. J. Imker, J. A. Gerlt, S. C. Almo
Crystal Structure Of Mandelate Racemase/Muconate Lactonizin Enzyme
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - MANDELATE RACEMASE/MUCONATE LACTONIZING ENZYME
    ChainsA, B, C, D, E, F
    EngineeredYES
    Expression SystemESCHERICHIA COLI
    Expression System Taxid562
    GeneA20C1_08358
    Organism ScientificMARINE ACTINOBACTERIUM PHSC20C1
    Organism Taxid312284
    StrainPHSC20C1

 Structural Features

(-) Chains, Units

  123456
Asymmetric Unit ABCDEF
Biological Unit 1 (1x)ABCDEF
Biological Unit 2 (1x)AB    
Biological Unit 3 (1x)  CD  
Biological Unit 4 (1x)    EF

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (4, 12)

Asymmetric Unit (4, 12)
No.NameCountTypeFull Name
1BCT2Ligand/IonBICARBONATE ION
2GOL1Ligand/IonGLYCEROL
3NA8Ligand/IonSODIUM ION
4PO41Ligand/IonPHOSPHATE ION
Biological Unit 1 (3, 4)
No.NameCountTypeFull Name
1BCT2Ligand/IonBICARBONATE ION
2GOL1Ligand/IonGLYCEROL
3NA-1Ligand/IonSODIUM ION
4PO41Ligand/IonPHOSPHATE ION
Biological Unit 2 (1, 1)
No.NameCountTypeFull Name
1BCT1Ligand/IonBICARBONATE ION
2GOL-1Ligand/IonGLYCEROL
3NA-1Ligand/IonSODIUM ION
4PO4-1Ligand/IonPHOSPHATE ION
Biological Unit 3 (1, 1)
No.NameCountTypeFull Name
1BCT-1Ligand/IonBICARBONATE ION
2GOL-1Ligand/IonGLYCEROL
3NA-1Ligand/IonSODIUM ION
4PO41Ligand/IonPHOSPHATE ION
Biological Unit 4 (2, 2)
No.NameCountTypeFull Name
1BCT1Ligand/IonBICARBONATE ION
2GOL1Ligand/IonGLYCEROL
3NA-1Ligand/IonSODIUM ION
4PO4-1Ligand/IonPHOSPHATE ION

(-) Sites  (12, 12)

Asymmetric Unit (12, 12)
No.NameEvidenceResiduesDescription
01AC1SOFTWARETYR A:258 , TYR D:258 , HOH D:621 , HOH D:631 , TYR F:258 , HOH F:626BINDING SITE FOR RESIDUE NA A 401
02AC2SOFTWAREASP A:215 , ASN A:217 , GLU A:241 , GLN A:268 , HOH A:625BINDING SITE FOR RESIDUE NA A 402
03AC3SOFTWAREARG A:238 , THR A:335 , ILE A:336BINDING SITE FOR RESIDUE BCT A 403
04AC4SOFTWARETYR B:258 , HOH B:596 , HOH B:608 , TYR C:258 , TYR E:258 , HOH E:615BINDING SITE FOR RESIDUE NA B 401
05AC5SOFTWAREASP B:215 , GLU B:241 , GLN B:268 , HOH B:607 , HOH B:617BINDING SITE FOR RESIDUE NA B 402
06AC6SOFTWAREASP C:215 , GLU C:241 , GLN C:268 , HOH C:623 , HOH C:644BINDING SITE FOR RESIDUE NA C 401
07AC7SOFTWAREARG C:115 , PHE C:271 , HOH C:531 , TRP F:246 , THR F:269BINDING SITE FOR RESIDUE PO4 C 402
08AC8SOFTWAREASP D:215 , GLU D:241 , GLN D:268 , HOH D:637 , HOH D:638BINDING SITE FOR RESIDUE NA D 401
09AC9SOFTWARELYS E:184 , ASP E:215 , GLU E:241 , GLN E:268 , HOH E:629 , HOH E:656BINDING SITE FOR RESIDUE NA E 401
10BC1SOFTWAREHIS C:247 , HOH E:515 , ASP F:102 , ARG F:303 , HOH F:526 , HOH F:569 , HOH F:587BINDING SITE FOR RESIDUE GOL F 401
11BC2SOFTWARELYS F:184 , ASP F:215 , ASN F:217 , GLU F:241 , GLN F:268 , HOH F:621 , HOH F:627 , HOH F:634BINDING SITE FOR RESIDUE NA F 402
12BC3SOFTWAREARG F:238 , ILE F:336 , HOH F:566 , HOH F:649BINDING SITE FOR RESIDUE BCT F 403

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4H83)

(-) Cis Peptide Bonds  (1, 1)

Asymmetric Unit
No.Residues
1Pro E:33 -Leu E:34

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4H83)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4H83)

(-) Exons   (0, 0)

(no "Exon" information available for 4H83)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it)
Chain A from PDB  Type:PROTEIN  Length:356
                                                                                                                                                                                                                                                                                                                                                                                                    
               SCOP domains d4h83a1 A:20-147 automated matches                                                                                    d4h83a2 A:148-385 automated matches                                                                                                                                                                                                            SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeeeeeeeee...eeeeeeeeeee....eeeeee.....hhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhh..hhhhhh.....eeeeeeee........hhhhhhhhhhhhh..eeeee....hhhhhhhhhhhhhhhhh...eeeee.....hhhhhhhhhhhh.......ee......hhhhhhhhhhhhh...eee.....hhhhhhhhhhhh...ee..hhhhh.hhhhhhhhhhhhhhh..ee....hhhhhhhhhhhh.....eeee....hhhhhhh..........eee...........hhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4h83 A  20 LTITRIETIPMVAPLMTHRATIVTRVHTDAGIIGEAYTGDEHETMFDIDRIIHEELAPTLIGQDAMAIERLWDSGYKVTFDILRDRRLGLVALAAVNTAIWDAVGKALKMPLWKLWGGYRNELPMIAIGGYYGEPLGSIADEMHNYQELGLAGVKFKVGGLSAAEDAARITAAREAAGDDFIICIDANQGYKPAVAVDLSRRIADLNIRWFEEPVEWHNDKRSMRDVRYQGSVPVCAGQTEFSASGCRDLMETGAIDVCNFDSSWSGGPTAWLRTAAIATSYDVQMGHHEEPQVSTHLLASQPHGTIAECFHPDRDPFWWNMITNRPKLNNGTLTLSDRPGLGWDLNWDYIDQYRV 385
                                    29    ||  49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       259       269       279       289       299       309       319       329       339       349       359       369       379      
                                         34|                                                                                                                                                                                                                                                                                                                                                    
                                          45                                                                                                                                                                                                                                                                                                                                                    

Chain B from PDB  Type:PROTEIN  Length:354
                                                                                                                                                                                                                                                                                                                                                                                                  
               SCOP domains d4h83b1 B:19-147 automated matches                                                                                  d4h83b2 B:148-385 automated matches                                                                                                                                                                                                            SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ...eeeeeeeeee....eeeeeeeee....eeeeee.....hhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhh..hhhhhh.....eeeeeeee........hhhhhhhhhhhh...eeeee....hhhhhhhhhhhhhhhhh...eeeee.....hhhhhhhhhhhh.......ee......hhhhhhhhhhhhh...eee.....hhhhhhhhhhhh...ee..hhhhh.hhhhhhhhhhhhhhh..ee....hhhhhhhhhhhh.....eeee.hhhhhhhhhh..........eee...........hhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 4h83 B  19 GLTITRIETIPMVAPLRATIVTRVHTDAGIIGEAYTGDEHETMFDIDRIIHEELAPTLIGQDAMAIERLWDSGYKVTFDILRDRRLGLVALAAVNTAIWDAVGKALKMPLWKLWGGYRNELPMIAIGGYYGEPLGSIADEMHNYQELGLAGVKFKVGGLSAAEDAARITAAREAAGDDFIICIDANQGYKPAVAVDLSRRIADLNIRWFEEPVEWHNDKRSMRDVRYQGSVPVCAGQTEFSASGCRDLMETGAIDVCNFDSSWSGGPTAWLRTAAIATSYDVQMGHHEEPQVSTHLLASQPHGTIAECFHPDRDPFWWNMITNRPKLNNGTLTLSDRPGLGWDLNWDYIDQYRV 385
                                    28     || 51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381    
                                          34|                                                                                                                                                                                                                                                                                                                                                 
                                           48                                                                                                                                                                                                                                                                                                                                                 

Chain C from PDB  Type:PROTEIN  Length:356
                                                                                                                                                                                                                                                                                                                                                                                                    
               SCOP domains d4h83c1 C:19-147 automated matches                                                                                   d4h83c2 C:148-386 automated matches                                                                                                                                                                                                             SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeeeeeeeeee...eeeeeeeeee....eeeeee.....hhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhh..hhhhhh.....eeeeeeee........hhhhhhhhhhhh...eeeee....hhhhhhhhhhhhhhhhh...eeeee.....hhhhhhhhhhhh.......ee......hhhhhhhhhhhhh...eee.....hhhhhhhhhhhh...ee..hhhhh.hhhhhhhhhhhhhhh..ee....hhhhhhhhhhhh.....eeee.....hhhhhh..........eee...........hhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4h83 C  19 GLTITRIETIPMVAPLHRATIVTRVHTDAGIIGEAYTGDEHETMFDIDRIIHEELAPTLIGQDAMAIERLWDSGYKVTFDILRDRRLGLVALAAVNTAIWDAVGKALKMPLWKLWGGYRNELPMIAIGGYYGEPLGSIADEMHNYQELGLAGVKFKVGGLSAAEDAARITAAREAAGDDFIICIDANQGYKPAVAVDLSRRIADLNIRWFEEPVEWHNDKRSMRDVRYQGSVPVCAGQTEFSASGCRDLMETGAIDVCNFDSSWSGGPTAWLRTAAIATSYDVQMGHHEEPQVSTHLLASQPHGTIAECFHPDRDPFWWNMITNRPKLNNGTLTLSDRPGLGWDLNWDYIDQYRVS 386
                                    28     || 50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380      
                                          34|                                                                                                                                                                                                                                                                                                                                                   
                                           47                                                                                                                                                                                                                                                                                                                                                   

Chain D from PDB  Type:PROTEIN  Length:366
                                                                                                                                                                                                                                                                                                                                                                                                              
               SCOP domains d4h83d1 D:20-147 automated matches                                                                                              d4h83d2 D:148-385 automated matches                                                                                                                                                                                                            SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ..eeeeeeeeee...eee......eee..eeeeeeeee....eeeeee.....hhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhh.....eeeeeeee........hhhhhhhhhhhh...eeeee....hhhhhhhhhhhhhhhhh...eeeee.....hhhhhhhhhhhh.......ee......hhhhhhhhhhhhh...eee.....hhhhhhhhhhhh...ee..hhhhh.hhhhhhhhhhhhhhh..ee....hhhhhhhhhhh......eee.....hhhhhhh..........eee...........hhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 4h83 D  20 LTITRIETIPMVAPLAREFRGSHYHMTHRATIVTRVHTDAGIIGEAYTGDEHETMFDIDRIIHEELAPTLIGQDAMAIERLWDSGYKVTFDILRDRRLGLVALAAVNTAIWDAVGKALKMPLWKLWGGYRNELPMIAIGGYYGEPLGSIADEMHNYQELGLAGVKFKVGGLSAAEDAARITAAREAAGDDFIICIDANQGYKPAVAVDLSRRIADLNIRWFEEPVEWHNDKRSMRDVRYQGSVPVCAGQTEFSASGCRDLMETGAIDVCNFDSSWSGGPTAWLRTAAIATSYDVQMGHHEEPQVSTHLLASQPHGTIAECFHPDRDPFWWNMITNRPKLNNGTLTLSDRPGLGWDLNWDYIDQYRV 385
                                    29        39        49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       259       269       279       289       299       309       319       329       339       349       359       369       379      

Chain E from PDB  Type:PROTEIN  Length:355
                                                                                                                                                                                                                                                                                                                                                                                                   
               SCOP domains d4h83e1 E:19-147 automated matches                                                                                  d4h83e2 E:148-386 automated matches                                                                                                                                                                                                             SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeeeeeeeee....eeeeeeeee....eeeeee..hhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhh..hhhhhh.....eeeeeeee........hhhhhhhhhhhh...eeeee....hhhhhhhhhhhhhhhhh...eeeee.....hhhhhhhhhhhh.......ee......hhhhhhhhhhhhh...eee.....hhhhhhhhhhhh...ee..hhhhh.hhhhhhhhhhhhhhh..ee....hhhhhhhhhhhh.....eeee....hhhhhhh..........eee...........hhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4h83 E  19 GLTITRIETIPMVAPLRATIVTRVHTDAGIIGEAYTGDEHETMFDIDRIIHEELAPTLIGQDAMAIERLWDSGYKVTFDILRDRRLGLVALAAVNTAIWDAVGKALKMPLWKLWGGYRNELPMIAIGGYYGEPLGSIADEMHNYQELGLAGVKFKVGGLSAAEDAARITAAREAAGDDFIICIDANQGYKPAVAVDLSRRIADLNIRWFEEPVEWHNDKRSMRDVRYQGSVPVCAGQTEFSASGCRDLMETGAIDVCNFDSSWSGGPTAWLRTAAIATSYDVQMGHHEEPQVSTHLLASQPHGTIAECFHPDRDPFWWNMITNRPKLNNGTLTLSDRPGLGWDLNWDYIDQYRVS 386
                                    28     || 51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381     
                                          34|                                                                                                                                                                                                                                                                                                                                                  
                                           48                                                                                                                                                                                                                                                                                                                                                  

Chain F from PDB  Type:PROTEIN  Length:368
                                                                                                                                                                                                                                                                                                                                                                                                                
               SCOP domains d4h83f1 F:19-147 automated matches                                                                                               d4h83f2 F:148-386 automated matches                                                                                                                                                                                                             SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeeeeeeeeeeeeeeeee....eeeeeeeeeeeeee....eeeeee.....hhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhh..hhhhhh.....eeeeeeee........hhhhhhhhhhhh...eeeee....hhhhhhhhhhhhhhhhh...eeeee.....hhhhhhhhhhhh.......ee......hhhhhhhhhhhhh...eee.....hhhhhhhhhhhh...ee..hhhhh.hhhhhhhhhhhhhhh..ee....hhhhhhhhhhhh.....eeee....hhhhhhh..........eee...........hhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4h83 F  19 GLTITRIETIPMVAPLAREFRGSHYHMTHRATIVTRVHTDAGIIGEAYTGDEHETMFDIDRIIHEELAPTLIGQDAMAIERLWDSGYKVTFDILRDRRLGLVALAAVNTAIWDAVGKALKMPLWKLWGGYRNELPMIAIGGYYGEPLGSIADEMHNYQELGLAGVKFKVGGLSAAEDAARITAAREAAGDDFIICIDANQGYKPAVAVDLSRRIADLNIRWFEEPVEWHNDKRSMRDVRYQGSVPVCAGQTEFSASGCRDLMETGAIDVCNFDSSWSGGPTAWLRTAAIATSYDVQMGHHEEPQVSTHLLASQPHGTIAECFHPDRDPFWWNMITNRPKLNNGTLTLSDRPGLGWDLNWDYIDQYRVS 386
                                    28        38        48        58        68        78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238       248       258       268       278       288       298       308       318       328       338       348       358       368       378        

   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (2, 12)

Asymmetric Unit

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4H83)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4H83)

(-) Gene Ontology  (3, 3)

Asymmetric Unit(hide GO term definitions)

 Visualization

(-) Interactive Views

Asymmetric Unit
  Complete Structure
    Jena3D(integrated viewing of ligand, site, SAP, PROSITE, SCOP information)
    WebMol | AstexViewer[tm]@PDBe
(Java Applets, require no local installation except for Java; loading may be slow)
    STRAP
(Java WebStart application, automatic local installation, requires Java; full application with system access!)
    RasMol
(require local installation)
    Molscript (VRML)
(requires installation of a VRML viewer; select preferred view via VRML and generate a mono or stereo PDF format file)
 
  Ligands, Modified Residues, Ions
    BCT  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
    GOL  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
    NA  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
    PO4  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
 
  Sites
    AC1  [ RasMol ]  +environment [ RasMol ]
    AC2  [ RasMol ]  +environment [ RasMol ]
    AC3  [ RasMol ]  +environment [ RasMol ]
    AC4  [ RasMol ]  +environment [ RasMol ]
    AC5  [ RasMol ]  +environment [ RasMol ]
    AC6  [ RasMol ]  +environment [ RasMol ]
    AC7  [ RasMol ]  +environment [ RasMol ]
    AC8  [ RasMol ]  +environment [ RasMol ]
    AC9  [ RasMol ]  +environment [ RasMol ]
    BC1  [ RasMol ]  +environment [ RasMol ]
    BC2  [ RasMol ]  +environment [ RasMol ]
    BC3  [ RasMol ]  +environment [ RasMol ]
 
  Cis Peptide Bonds
    Pro E:33 - Leu E:34   [ RasMol ]  
 
Biological Units
  Complete Structure
    Biological Unit 1  [ Jena3D ]
    Biological Unit 2  [ Jena3D ]
    Biological Unit 3  [ Jena3D ]
    Biological Unit 4  [ Jena3D ]

(-) Still Images

Jmol
  protein: cartoon or spacefill or dots and stick; nucleic acid: cartoon and stick; ligands: spacefill; active site: stick
Molscript
  protein, nucleic acid: cartoon; ligands: spacefill; active site: ball and stick

 Databases and Analysis Tools

(-) Databases

Access by PDB/NDB ID
  4h83
    Family and Domain InformationProDom | SYSTERS
    General Structural InformationGlycoscienceDB | MMDB | NDB | OCA | PDB | PDBe | PDBj | PDBsum | PDBWiki | PQS | PROTEOPEDIA
    Orientation in MembranesOPM
    Protein SurfaceSURFACE
    Secondary StructureDSSP (structure derived) | HSSP (homology derived)
    Structural GenomicsGeneCensus
    Structural NeighboursCE | VAST
    Structure ClassificationCATH | Dali | SCOP
    Validation and Original DataBMRB Data View | BMRB Restraints Grid | EDS | PROCHECK | RECOORD | WHAT_CHECK
 
Access by UniProt ID/Accession number
  A4AFX2_9ACTN | A4AFX2
    Comparative Protein Structure ModelsModBase
    Genomic InformationEnsembl
    Protein-protein InteractionDIP
    Sequence, Family and Domain InformationInterPro | Pfam | SMART | UniProtKB/TrEMBL
 
Access by Enzyme Classificator   (EC Number)
  (no 'Enzyme Classificator' available)
    General Enzyme InformationBRENDA | EC-PDB | Enzyme | IntEnz
    PathwayKEGG | MetaCyc
 
Access by Disease Identifier   (MIM ID)
  (no 'MIM ID' available)
    Disease InformationOMIM
 
Access by GenAge ID
  (no 'GenAge ID' available)
    Age Related InformationGenAge

(-) Analysis Tools

Access by PDB/NDB ID
    Domain InformationXDom
    Interatomic Contacts of Structural UnitsCSU
    Ligand-protein ContactsLPC
    Protein CavitiescastP
    Sequence and Secondary StructurePDBCartoon
    Structure AlignmentSTRAP(Java WebStart application, automatic local installation, requires Java; full application with system access!)
    Structure and Sequence BrowserSTING
 
Access by UniProt ID/Accession number
  A4AFX2_9ACTN | A4AFX2
    Protein Disorder PredictionDisEMBL | FoldIndex | GLOBPLOT (for more information see DisProt)

 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/TrEMBL
        A4AFX2_9ACTN | A4AFX23msy 3no1

(-) Related Entries Specified in the PDB File

(no "Related Entries Specified in the PDB File" available for 4H83)