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(-)Asym./Biol. Unit
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Asym./Biol. Unit  (Jmol Viewer)

(-) Description

Title :  CRYSTAL STRUCTURE OF MANDELATE RACEMASE/MUCONATE LACTONIZING ENZYME FROM A MARINE ACTINOBACTERIUM
 
Authors :  L. Satyanarayana, S. K. Burley, S. Swaminathan, New York Sgx Resear For Structural Genomics (Nysgxrc)
Date :  29 Apr 10  (Deposition) - 30 Jun 10  (Release) - 30 Jun 10  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.50
Chains :  Asym./Biol. Unit :  A,B,C,D,E,F
Keywords :  Enolase, Metal-Binding, Psi-Ii, Nysgxrc. , Structural Genomics, Protein Structure Initiative, New York Sgx Research Center For Structural Genomics, Isomerase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  L. Satyanarayana, S. K. Burley, S. Swaminathan
Crystal Structure Of Mandelate Racemase/Muconate Lactonizin Enzyme From A Marine Actinobacterium
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - MANDELATE RACEMASE/MUCONATE LACTONIZING ENZYME
    Chains: A, B, C, D, E, F
    EC Number: 5.5.1.1
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Cell Line: TOP10 CELLS (INVITROGEN)
    Expression System Plasmid: PSGX3
    Expression System Strain: BL21 (DE3) CODON + RIL
    Expression System Taxid: 469008
    Expression System Vector Type: BC -PSGX3 (BC)
    Gene: A20C1_08358, AAOB01000002
    Organism Scientific: MARINE ACTINOBACTERIUM PHSC20C1
    Organism Taxid: 312284

 Structural Features

(-) Chains, Units

  123456
Asymmetric/Biological Unit : ABCDEF

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 60)

Asymmetric/Biological Unit (1, 60)
No.NameCountTypeFull Name
1MSE60Mod. Amino AcidSELENOMETHIONINE

(-) Sites  (0, 0)

(no "Site" information available for 3MSY)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 3MSY)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 3MSY)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 3MSY)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 3MSY)

(-) Exons   (0, 0)

(no "Exon" information available for 3MSY)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:349
 aligned with A4AFX2_9ACTN | A4AFX2 from UniProtKB/TrEMBL  Length:388

    Alignment length:354
                                    37        47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377    
         A4AFX2_9ACTN    28 IPMVAPLAREFRGSHYHMTHRATIVTRVHTDAGIIGEAYTGDEHETMFDIDRIIHEELAPTLIGQDAMAIERLWDSGYKVTFDILRDRRLGLVALAAVNTAIWDAVGKALKMPLWKLWGGYRNELPMIAIGGYYGEPLGSIADEMHNYQELGLAGVKFKVGGLSAAEDAARITAAREAAGDDFIICIDANQGYKPAVAVDLSRRIADLNIRWFEEPVEWHNDKRSMRDVRYQGSVPVCAGQTEFSASGCRDLMETGAIDVCNFDSSWSGGPTAWLRTAAIATSYDVQMGHHEEPQVSTHLLASQPHGTIAECFHPDRDPFWWNMITNRPKLNNGTLTLSDRPGLGWDLNWDYID 381
               SCOP domains d3msya1 A:28-     147 automated matches                                                                                 d3msya2 A:148-381 automated matches                                                                                                                                                                                                        SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ..eeeeeeeeeee-----..eeeeeeeeee....eeeeee.....hhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhh..hhhhhh.....eeeeeeee........hhhhhhhhhhhh...eeeee....hhhhhhhhhhhhhhhhh...eeeee.....hhhhhhhhhhhh.......ee...hhhhhhhhhhhhhhhh...eee.....hhhhhhhhhhhh...ee........hhhhhhhhhhhhhh...ee....hhhhhhhhhhhh.....eeee....hhhhhhhh.....ee..eee...........hhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 3msy A  28 IPmVAPLAREFRG-----THRATIVTRVHTDAGIIGEAYTGDEHETmFDIDRIIHEELAPTLIGQDAmAIERLWDSGYKVTFDILRDRRLGLVALAAVNTAIWDAVGKALKmPLWKLWGGYRNELPmIAIGGYYGEPLGSIADEmHNYQELGLAGVKFKVGGLSAAEDAARITAAREAAGDDFIICIDANQGYKPAVAVDLSRRIADLNIRWFEEPVEWHNDKRSmRDVRYQGSVPVCAGQTEFSASGCRDLmETGAIDVCNFDSSWSGGPTAWLRTAAIATSYDVQmGHHEEPQVSTHLLASQPHGTIAECFHPDRDPFWWNmITNRPKLNNGTLTLSDRPGLGWDLNWDYID 381
                              |     37  |     47        57        67      | 77        87       |97       107       117       127       137 |     147      |157       167    |  177       187       197       207       217       227       237       247     | 257       267       277  |    287       297       307       317       327       337       347   |   357       367       377    
                              |        40    46                          74-MSE               95-MSE                                     139-MSE        154-MSE           172-MSE                                                                          253-MSE                    280-MSE                            315-MSE                             351-MSE                          
                             30-MSE                                                                                                                                                                                                                                                                                                                                                           


Chain B from PDB  Type:PROTEIN  Length:351
 aligned with A4AFX2_9ACTN | A4AFX2 from UniProtKB/TrEMBL  Length:388

    Alignment length:354
                                    37        47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377    
         A4AFX2_9ACTN    28 IPMVAPLAREFRGSHYHMTHRATIVTRVHTDAGIIGEAYTGDEHETMFDIDRIIHEELAPTLIGQDAMAIERLWDSGYKVTFDILRDRRLGLVALAAVNTAIWDAVGKALKMPLWKLWGGYRNELPMIAIGGYYGEPLGSIADEMHNYQELGLAGVKFKVGGLSAAEDAARITAAREAAGDDFIICIDANQGYKPAVAVDLSRRIADLNIRWFEEPVEWHNDKRSMRDVRYQGSVPVCAGQTEFSASGCRDLMETGAIDVCNFDSSWSGGPTAWLRTAAIATSYDVQMGHHEEPQVSTHLLASQPHGTIAECFHPDRDPFWWNMITNRPKLNNGTLTLSDRPGLGWDLNWDYID 381
               SCOP domains d3msyb1 B:28-14   7 automated matches                                                                                   d3msyb2 B:148-381 automated matches                                                                                                                                                                                                        SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ..eeeeeeeeeee..---..eeeeeeeeee....eeeeee.....hhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhh..hhhhhh.....eeeeeeee........hhhhhhhhhhhh...eeeee....hhhhhhhhhhhhhhhhh...eeeee.....hhhhhhhhhhhhhhh....ee......hhhhhhhhhhhhh...eee.....hhhhhhhhhhhh...ee..hhhhh.hhhhhhhhhhhhhhh..ee....hhhhhhhhhhhh.....eee.....hhhhhhh..........eee................. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 3msy B  28 IPmVAPLAREFRGSH---THRATIVTRVHTDAGIIGEAYTGDEHETmFDIDRIIHEELAPTLIGQDAmAIERLWDSGYKVTFDILRDRRLGLVALAAVNTAIWDAVGKALKmPLWKLWGGYRNELPmIAIGGYYGEPLGSIADEmHNYQELGLAGVKFKVGGLSAAEDAARITAAREAAGDDFIICIDANQGYKPAVAVDLSRRIADLNIRWFEEPVEWHNDKRSmRDVRYQGSVPVCAGQTEFSASGCRDLmETGAIDVCNFDSSWSGGPTAWLRTAAIATSYDVQmGHHEEPQVSTHLLASQPHGTIAECFHPDRDPFWWNmITNRPKLNNGTLTLSDRPGLGWDLNWDYID 381
                              |     37    |   47        57        67      | 77        87       |97       107       117       127       137 |     147      |157       167    |  177       187       197       207       217       227       237       247     | 257       267       277  |    287       297       307       317       327       337       347   |   357       367       377    
                             30-MSE      42  46                          74-MSE               95-MSE                                     139-MSE        154-MSE           172-MSE                                                                          253-MSE                    280-MSE                            315-MSE                             351-MSE                          


Chain C from PDB  Type:PROTEIN  Length:355
 aligned with A4AFX2_9ACTN | A4AFX2 from UniProtKB/TrEMBL  Length:388

    Alignment length:358
                                    37        47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377        
         A4AFX2_9ACTN    28 IPMVAPLAREFRGSHYHMTHRATIVTRVHTDAGIIGEAYTGDEHETMFDIDRIIHEELAPTLIGQDAMAIERLWDSGYKVTFDILRDRRLGLVALAAVNTAIWDAVGKALKMPLWKLWGGYRNELPMIAIGGYYGEPLGSIADEMHNYQELGLAGVKFKVGGLSAAEDAARITAAREAAGDDFIICIDANQGYKPAVAVDLSRRIADLNIRWFEEPVEWHNDKRSMRDVRYQGSVPVCAGQTEFSASGCRDLMETGAIDVCNFDSSWSGGPTAWLRTAAIATSYDVQMGHHEEPQVSTHLLASQPHGTIAECFHPDRDPFWWNMITNRPKLNNGTLTLSDRPGLGWDLNWDYIDQYRV 385
               SCOP domains d3msyc1 C:28-14   7 automated matches                                                                                   d3msyc2 C:148-385 automated matches                                                                                                                                                                                                            SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeeeeeeee..---..eeeeeeeeee....eeeeee.....hhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhh..hhhhhh.....eeeeeeee........hhhhhhhhhhhh...eeeee....hhhhhhhhhhhhhhhhh...eeeee.....hhhhhhhhhhhh....eeeee......hhhhhhhhhhhhh...eee.....hhhhhhhhhhhh...ee..hhhhh.hhhhhhhhhhhhhhh..ee....hhhhhhhhhhhh.....eee.....hhhhhhhh.........eee...........hhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3msy C  28 IPmVAPLAREFRGSH---THRATIVTRVHTDAGIIGEAYTGDEHETmFDIDRIIHEELAPTLIGQDAmAIERLWDSGYKVTFDILRDRRLGLVALAAVNTAIWDAVGKALKmPLWKLWGGYRNELPmIAIGGYYGEPLGSIADEmHNYQELGLAGVKFKVGGLSAAEDAARITAAREAAGDDFIICIDANQGYKPAVAVDLSRRIADLNIRWFEEPVEWHNDKRSmRDVRYQGSVPVCAGQTEFSASGCRDLmETGAIDVCNFDSSWSGGPTAWLRTAAIATSYDVQmGHHEEPQVSTHLLASQPHGTIAECFHPDRDPFWWNmITNRPKLNNGTLTLSDRPGLGWDLNWDYIDQYRV 385
                              |     37    |   47        57        67      | 77        87       |97       107       117       127       137 |     147      |157       167    |  177       187       197       207       217       227       237       247     | 257       267       277  |    287       297       307       317       327       337       347   |   357       367       377        
                             30-MSE      42  46                          74-MSE               95-MSE                                     139-MSE        154-MSE           172-MSE                                                                          253-MSE                    280-MSE                            315-MSE                             351-MSE                              


Chain D from PDB  Type:PROTEIN  Length:351
 aligned with A4AFX2_9ACTN | A4AFX2 from UniProtKB/TrEMBL  Length:388

    Alignment length:354
                                    37        47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377    
         A4AFX2_9ACTN    28 IPMVAPLAREFRGSHYHMTHRATIVTRVHTDAGIIGEAYTGDEHETMFDIDRIIHEELAPTLIGQDAMAIERLWDSGYKVTFDILRDRRLGLVALAAVNTAIWDAVGKALKMPLWKLWGGYRNELPMIAIGGYYGEPLGSIADEMHNYQELGLAGVKFKVGGLSAAEDAARITAAREAAGDDFIICIDANQGYKPAVAVDLSRRIADLNIRWFEEPVEWHNDKRSMRDVRYQGSVPVCAGQTEFSASGCRDLMETGAIDVCNFDSSWSGGPTAWLRTAAIATSYDVQMGHHEEPQVSTHLLASQPHGTIAECFHPDRDPFWWNMITNRPKLNNGTLTLSDRPGLGWDLNWDYID 381
               SCOP domains d3msyd1 D:28-14   7 automated matches                                                                                   d3msyd2 D:148-381 automated matches                                                                                                                                                                                                        SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ..eeeeeeeeeee..---..eeeeeeeeee....eeeeee.....hhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhh.hhhhhh.....eeeeeeee........hhhhhhhhhhhh...eeeee....hhhhhhhhhhhhhhhhh...eeeee.....hhhhhhhhhhhh.......ee......hhhhhhhhhhhhh...eee.....hhhhhhhhhhh....ee..hhhhh.hhhhhhhhhhhhhh...ee....hhhhhhhhhhhh.....eeee....hhhhhhhh.........eee...........hhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 3msy D  28 IPmVAPLAREFRGSH---THRATIVTRVHTDAGIIGEAYTGDEHETmFDIDRIIHEELAPTLIGQDAmAIERLWDSGYKVTFDILRDRRLGLVALAAVNTAIWDAVGKALKmPLWKLWGGYRNELPmIAIGGYYGEPLGSIADEmHNYQELGLAGVKFKVGGLSAAEDAARITAAREAAGDDFIICIDANQGYKPAVAVDLSRRIADLNIRWFEEPVEWHNDKRSmRDVRYQGSVPVCAGQTEFSASGCRDLmETGAIDVCNFDSSWSGGPTAWLRTAAIATSYDVQmGHHEEPQVSTHLLASQPHGTIAECFHPDRDPFWWNmITNRPKLNNGTLTLSDRPGLGWDLNWDYID 381
                              |     37    |   47        57        67      | 77        87       |97       107       117       127       137 |     147      |157       167    |  177       187       197       207       217       227       237       247     | 257       267       277  |    287       297       307       317       327       337       347   |   357       367       377    
                             30-MSE      42  46                          74-MSE               95-MSE                                     139-MSE        154-MSE           172-MSE                                                                          253-MSE                    280-MSE                            315-MSE                             351-MSE                          


Chain E from PDB  Type:PROTEIN  Length:350
 aligned with A4AFX2_9ACTN | A4AFX2 from UniProtKB/TrEMBL  Length:388

    Alignment length:354
                                    37        47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377    
         A4AFX2_9ACTN    28 IPMVAPLAREFRGSHYHMTHRATIVTRVHTDAGIIGEAYTGDEHETMFDIDRIIHEELAPTLIGQDAMAIERLWDSGYKVTFDILRDRRLGLVALAAVNTAIWDAVGKALKMPLWKLWGGYRNELPMIAIGGYYGEPLGSIADEMHNYQELGLAGVKFKVGGLSAAEDAARITAAREAAGDDFIICIDANQGYKPAVAVDLSRRIADLNIRWFEEPVEWHNDKRSMRDVRYQGSVPVCAGQTEFSASGCRDLMETGAIDVCNFDSSWSGGPTAWLRTAAIATSYDVQMGHHEEPQVSTHLLASQPHGTIAECFHPDRDPFWWNMITNRPKLNNGTLTLSDRPGLGWDLNWDYID 381
               SCOP domains d3msye1 E:28-1    47 automated matches                                                                                  d3msye2 E:148-381 automated matches                                                                                                                                                                                                        SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ..eeeeeeeeeee.----..eeeeeeeeee....eeeeee.....hhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhh..hhhhhh.....eeeeeeee........hhhhhhhhhhh....eeeee....hhhhhhhhhhhhhhhhh...eeeee.....hhhhhhhhhhhh.......ee......hhhhhhhhhhhhh...eee.....hhhhhhhhhhhh...ee..hhhhh.hhhhhhhhhhhhhhhh.ee....hhhhhhhhhhhh.....eee......hhhhhhh.........eee...........hhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 3msy E  28 IPmVAPLAREFRGS----THRATIVTRVHTDAGIIGEAYTGDEHETmFDIDRIIHEELAPTLIGQDAmAIERLWDSGYKVTFDILRDRRLGLVALAAVNTAIWDAVGKALKmPLWKLWGGYRNELPmIAIGGYYGEPLGSIADEmHNYQELGLAGVKFKVGGLSAAEDAARITAAREAAGDDFIICIDANQGYKPAVAVDLSRRIADLNIRWFEEPVEWHNDKRSmRDVRYQGSVPVCAGQTEFSASGCRDLmETGAIDVCNFDSSWSGGPTAWLRTAAIATSYDVQmGHHEEPQVSTHLLASQPHGTIAECFHPDRDPFWWNmITNRPKLNNGTLTLSDRPGLGWDLNWDYID 381
                              |     37   |    47        57        67      | 77        87       |97       107       117       127       137 |     147      |157       167    |  177       187       197       207       217       227       237       247     | 257       267       277  |    287       297       307       317       327       337       347   |   357       367       377    
                             30-MSE     41   46                          74-MSE               95-MSE                                     139-MSE        154-MSE           172-MSE                                                                          253-MSE                    280-MSE                            315-MSE                             351-MSE                          


Chain F from PDB  Type:PROTEIN  Length:351
 aligned with A4AFX2_9ACTN | A4AFX2 from UniProtKB/TrEMBL  Length:388

    Alignment length:354
                                    37        47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377    
         A4AFX2_9ACTN    28 IPMVAPLAREFRGSHYHMTHRATIVTRVHTDAGIIGEAYTGDEHETMFDIDRIIHEELAPTLIGQDAMAIERLWDSGYKVTFDILRDRRLGLVALAAVNTAIWDAVGKALKMPLWKLWGGYRNELPMIAIGGYYGEPLGSIADEMHNYQELGLAGVKFKVGGLSAAEDAARITAAREAAGDDFIICIDANQGYKPAVAVDLSRRIADLNIRWFEEPVEWHNDKRSMRDVRYQGSVPVCAGQTEFSASGCRDLMETGAIDVCNFDSSWSGGPTAWLRTAAIATSYDVQMGHHEEPQVSTHLLASQPHGTIAECFHPDRDPFWWNMITNRPKLNNGTLTLSDRPGLGWDLNWDYID 381
               SCOP domains d3msyf1 F:28-14   7 automated matches                                                                                   d3msyf2 F:148-381 automated matches                                                                                                                                                                                                        SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
           Pfam domains (1) MR_MLE_N-3msyF0   1 F:28-146                                                                                           ---------------------------------------------------MR_MLE-3msyF07 F:198-267                                              ------------------------------------------------------------------------------------------------------------------ Pfam domains (1)
           Pfam domains (2) MR_MLE_N-3msyF0   2 F:28-146                                                                                           ---------------------------------------------------MR_MLE-3msyF08 F:198-267                                              ------------------------------------------------------------------------------------------------------------------ Pfam domains (2)
           Pfam domains (3) MR_MLE_N-3msyF0   3 F:28-146                                                                                           ---------------------------------------------------MR_MLE-3msyF09 F:198-267                                              ------------------------------------------------------------------------------------------------------------------ Pfam domains (3)
           Pfam domains (4) MR_MLE_N-3msyF0   4 F:28-146                                                                                           ---------------------------------------------------MR_MLE-3msyF10 F:198-267                                              ------------------------------------------------------------------------------------------------------------------ Pfam domains (4)
           Pfam domains (5) MR_MLE_N-3msyF0   5 F:28-146                                                                                           ---------------------------------------------------MR_MLE-3msyF11 F:198-267                                              ------------------------------------------------------------------------------------------------------------------ Pfam domains (5)
           Pfam domains (6) MR_MLE_N-3msyF0   6 F:28-146                                                                                           ---------------------------------------------------MR_MLE-3msyF12 F:198-267                                              ------------------------------------------------------------------------------------------------------------------ Pfam domains (6)
           Pfam domains (7) -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MR_MLE_C-3msyF13 F:267-374                                                                                  ------- Pfam domains (7)
           Pfam domains (8) -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MR_MLE_C-3msyF14 F:267-374                                                                                  ------- Pfam domains (8)
           Pfam domains (9) -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MR_MLE_C-3msyF15 F:267-374                                                                                  ------- Pfam domains (9)
          Pfam domains (10) -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MR_MLE_C-3msyF16 F:267-374                                                                                  ------- Pfam domains (10)
          Pfam domains (11) -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MR_MLE_C-3msyF17 F:267-374                                                                                  ------- Pfam domains (11)
          Pfam domains (12) -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MR_MLE_C-3msyF18 F:267-374                                                                                  ------- Pfam domains (12)
         Sec.struct. author ..eeeeeeee.....---.....eeeeeee....eeeeee.....hhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhh..hhhhhh.....eeeeeeee........hhhhhhhhhhhh...eeeee....hhhhhhhhhhhhhhhhh...eeeee.....hhhhhhhhhhhh.......ee......hhhhhhhhhhhhh...eee.....hhhhhhhhhhhh...ee........hhhhhhhhhhhhhhh..ee....hhhhhhhhhhh......eeee....hhhhhhh..........eee...........hhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 3msy F  28 IPmVAPLAREFRGSH---THRATIVTRVHTDAGIIGEAYTGDEHETmFDIDRIIHEELAPTLIGQDAmAIERLWDSGYKVTFDILRDRRLGLVALAAVNTAIWDAVGKALKmPLWKLWGGYRNELPmIAIGGYYGEPLGSIADEmHNYQELGLAGVKFKVGGLSAAEDAARITAAREAAGDDFIICIDANQGYKPAVAVDLSRRIADLNIRWFEEPVEWHNDKRSmRDVRYQGSVPVCAGQTEFSASGCRDLmETGAIDVCNFDSSWSGGPTAWLRTAAIATSYDVQmGHHEEPQVSTHLLASQPHGTIAECFHPDRDPFWWNmITNRPKLNNGTLTLSDRPGLGWDLNWDYID 381
                              |     37    |   47        57        67      | 77        87       |97       107       117       127       137 |     147      |157       167    |  177       187       197       207       217       227       237       247     | 257       267       277  |    287       297       307       317       327       337       347   |   357       367       377    
                             30-MSE      42  46                          74-MSE               95-MSE                                     139-MSE        154-MSE           172-MSE                                                                          253-MSE                    280-MSE                            315-MSE                             351-MSE
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (2, 12)

Asymmetric/Biological Unit
(-)
Class: Alpha and beta proteins (a+b) (23004)
(-)
Class: Alpha and beta proteins (a/b) (23833)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 3MSY)

(-) Pfam Domains  (3, 18)

Asymmetric/Biological Unit
(-)
Clan: Enolase_N (69)
(-)
Clan: Enolase_TIM (82)

(-) Gene Ontology  (3, 3)

Asymmetric/Biological Unit(hide GO term definitions)
Chain A,B,C,D,E,F   (A4AFX2_9ACTN | A4AFX2)
molecular function
    GO:0003824    catalytic activity    Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
    GO:0046872    metal ion binding    Interacting selectively and non-covalently with any metal ion.
biological process
    GO:0008152    metabolic process    The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.

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  A4AFX2_9ACTN | A4AFX2
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 Related Entries

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        A4AFX2_9ACTN | A4AFX2: 3no1 4h83

(-) Related Entries Specified in the PDB File

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