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Title :   CRYSTAL STRUCTURE OF HUMAN 17BETA-HYDROXYSTEROID DEHYDROGENASE TYPE 5 IN COMPLEX WITH 3-((3,4-DIHYDROISOQUINOLIN-2(1H)-YL)SULFONYL)BENZOIC ACID (17)

Authors :   A. P. Turnbull, S. M. F. Jamieson, D. G. Brooke, D. Heinrich, G. J. Atwell E. J. Hamilton, L. J. M. Rigoreau, E. Trivier, C. Soudy, S. S. Samlal, P. E. Schroeder, T. Raynham, J. U. Flanagan, W. A. Denny

Date :   22 May 12 (Deposition) - 10 Oct 12 (Release) - 10 Oct 12 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   2.00

Chains :   Asym. Unit : A,B
Biol. Unit 1: A  (1x)
Biol. Unit 2: B  (1x)

Keywords :   Aldo-Keto Reductase, Oxidoreductase-Oxidoreductase Inhibitor Complex (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   S. M. Jamieson, D. G. Brooke, D. Heinrich, G. J. Atwell, S. Silva, E. J. Hamilton, A. P. Turnbull, L. J. Rigoreau, E. Trivier, C. Soudy, S. S. Samlal, P. J. Owen, E. Schroeder, T. Raynham, J. U. Flanagan, W. A. Denny
3-(3, 4-Dihydroisoquinolin-2(1H)-Ylsulfonyl)Benzoic Acids; A New Class Of Highly Potent And Selective Inhibitors Of The Type 5 17-Beta-Hydroxysteroid Dehydrogenase Akr1C3
J. Med. Chem. V. 55 7746 2012
PubMed-ID: 22877157 | Reference-DOI: 10.1021/JM3007867

Molecule 1 - ALDO-KETO REDUCTASE FAMILY 1 MEMBER C3
	Chains	:	A, B
	EC Number	:	1.-.-.-, 1.1.1.213, 1.1.1.112, 1.1.1.188, 1.1.1.63, 1.1.1.64, 1.3.1.20
	Engineered	:	YES
	Expression System	:	ESCHERICHIA COLI
	Expression System Plasmid	:	PET21A
	Expression System Strain	:	BL21 DE3
	Expression System Taxid	:	469008
	Expression System Vector Type	:	PLASMID
	Gene	:	AKR1C3, DDH1, HSD17B5, KIAA0119, PGFS
	Organism Common	:	HUMAN
	Organism Scientific	:	HOMO SAPIENS
	Organism Taxid	:	9606
	Synonym	:	17-BETA-HYDROXYSTEROID DEHYDROGENASE TYPE 5, 17-BETA-HSD 5, 3-ALPHA-HSD TYPE II, BRAIN, 3-ALPHA-HYDROXYSTEROID DEHYDROGENASE TYPE 2, 3-ALPHA-HSD TYPE 2, CHLORDECONE REDUCTASE HOMOLOG HAKRB, DIHYDRODIOL DEHYDROGENASE 3, DD-3, DD3, DIHYDRODIOL DEHYDROGENASE TYPE I, HA1753, INDANOL DEHYDROGENASE, PROSTAGLANDIN F SYNTHASE, PGFS, TESTOSTERONE 17-BETA-DEHYDROGENASE 5, TRANS-1,2-DIHYDROBENZENE- 1,2-DIOL DEHYDROGENASE

		1	2
Asymmetric Unit	:	A	B
Biological Unit 1 (1x)	:	A
Biological Unit 2 (1x)	:		B

Summary Information (see also Sequences/Alignments below)

Asymmetric Unit (3, 13)

No.	Name	Count	Type	Full Name
1	0SZ	2	Ligand/Ion	3-(3,4-DIHYDROISOQUINOLIN-2(1H)-YLSULFONYL)BENZOIC ACID
2	EDO	9	Ligand/Ion	1,2-ETHANEDIOL
3	NAP	2	Ligand/Ion	NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE

Biological Unit 1 (3, 8)

No.	Name	Count	Type	Full Name
1	0SZ	1	Ligand/Ion	3-(3,4-DIHYDROISOQUINOLIN-2(1H)-YLSULFONYL)BENZOIC ACID
2	EDO	6	Ligand/Ion	1,2-ETHANEDIOL
3	NAP	1	Ligand/Ion	NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE

Biological Unit 2 (3, 5)

No.	Name	Count	Type	Full Name
1	0SZ	1	Ligand/Ion	3-(3,4-DIHYDROISOQUINOLIN-2(1H)-YLSULFONYL)BENZOIC ACID
2	EDO	3	Ligand/Ion	1,2-ETHANEDIOL
3	NAP	1	Ligand/Ion	NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE

Asymmetric Unit (13, 13)

No.	Name	Evidence	Residues	Description
01	AC1	SOFTWARE	GLY A:22 , THR A:23 , TYR A:24 , ASP A:50 , TYR A:55 , HIS A:117 , SER A:166 , ASN A:167 , GLN A:190 , TYR A:216 , SER A:217 , ALA A:218 , LEU A:219 , GLY A:220 , SER A:221 , GLN A:222 , LEU A:236 , ALA A:253 , LEU A:268 , ALA A:269 , LYS A:270 , SER A:271 , TYR A:272 , ARG A:276 , GLN A:279 , ASN A:280 , 0SZ A:402 , HOH A:506 , HOH A:515 , HOH A:521 , HOH A:539 , HOH A:559 , HOH A:629 , HOH A:719 , HOH A:759	BINDING SITE FOR RESIDUE NAP A 401
02	AC2	SOFTWARE	TYR A:24 , TYR A:55 , TRP A:86 , HIS A:117 , PHE A:311 , NAP A:401 , EDO A:403 , HOH A:515 , HOH A:745	BINDING SITE FOR RESIDUE 0SZ A 402
03	AC3	SOFTWARE	TRP A:86 , SER A:87 , SER A:118 , MET A:120 , 0SZ A:402	BINDING SITE FOR RESIDUE EDO A 403
04	AC4	SOFTWARE	ALA A:44 , ASP A:143 , ARG A:278 , VAL A:281 , HOH A:750	BINDING SITE FOR RESIDUE EDO A 404
05	AC5	SOFTWARE	LEU A:122 , SER A:129 , VAL A:137 , PHE A:311 , HOH A:745	BINDING SITE FOR RESIDUE EDO A 405
06	AC6	SOFTWARE	TYR A:24 , ARG A:226 , TRP A:227 , HOH A:574 , HOH A:664 , HOH A:774	BINDING SITE FOR RESIDUE EDO A 406
07	AC7	SOFTWARE	LYS A:225 , TRP A:227 , VAL A:228 , HOH A:546 , HOH A:600 , HOH A:691 , HOH A:771 , HIS B:14	BINDING SITE FOR RESIDUE EDO A 407
08	AC8	SOFTWARE	GLN A:6 , PRO A:17 , VAL A:18 , LEU A:19 , GLY A:45 , PHE A:46 , ARG A:47 , HIS A:48 , PHE A:284	BINDING SITE FOR RESIDUE EDO A 408
09	AC9	SOFTWARE	GLY B:22 , THR B:23 , TYR B:24 , ASP B:50 , TYR B:55 , HIS B:117 , SER B:166 , ASN B:167 , GLN B:190 , TYR B:216 , SER B:217 , ALA B:218 , LEU B:219 , GLY B:220 , SER B:221 , GLN B:222 , ALA B:253 , LEU B:268 , ALA B:269 , LYS B:270 , SER B:271 , TYR B:272 , ARG B:276 , GLN B:279 , ASN B:280 , 0SZ B:702 , HOH B:802 , HOH B:809 , HOH B:831 , HOH B:837 , HOH B:853 , HOH B:964 , HOH B:979 , HOH B:985	BINDING SITE FOR RESIDUE NAP B 701
10	BC1	SOFTWARE	TYR B:24 , LEU B:54 , TYR B:55 , HIS B:117 , ASN B:167 , TYR B:216 , TRP B:227 , PHE B:311 , NAP B:701 , EDO B:703 , HOH B:853 , HOH B:1031	BINDING SITE FOR RESIDUE 0SZ B 702
11	BC2	SOFTWARE	TRP B:86 , SER B:87 , SER B:118 , MET B:120 , 0SZ B:702	BINDING SITE FOR RESIDUE EDO B 703
12	BC3	SOFTWARE	TYR B:319 , HOH B:817 , HOH B:963 , HOH B:1047 , HOH B:1072	BINDING SITE FOR RESIDUE EDO B 704
13	BC4	SOFTWARE	ALA B:44 , ARG B:278 , HOH B:967 , HOH B:1065	BINDING SITE FOR RESIDUE EDO B 705

(no "SS Bond" information available for 4FAM)

(no "Cis Peptide Bond" information available for 4FAM)

(no "SAP(SNP)/Variant" information available for 4FAM)

(no "PROSITE Motif" information available for 4FAM)

(no "Exon" information available for 4FAM)

Asymmetric Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
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	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
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Chain A from PDB  Type:PROTEIN  Length:315
                                                                                                                                                                                                                                                                                                                                                           
               SCOP domains d4fama_ A: Prostaglandin d2 11-ketoreductase (akr1c3)                                                                                                                                                                                                                                                                       SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eee.....eee.eeee........hhhhhhhhhhhhhhh..eee.hhhhhhhhhhhhhhhhhhhh...hhhhheeeeeehhhhhhhhhhhhhhhhhhhhhh...eeeeee..........................hhhhhhhhhhhhhhh..eeeeeee..hhhhhhhhhh.........eeeee......hhhhhhhhhhh..eeeee.................hhhhhhhhhhhhhhhh.hhhhhhhhhhhhh..eeeee..hhhhhhhhhhhhhh..hhhhhhhhhh.........hhhhhh....... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4fam A   6 QCVKLNDGHFMPVLGFGTYAPPEVPRSKALEVTKLAIEAGFRHIDSAHLYNNEEQVGLAIRSKIADGSVKREDIFYTSKLWSTFHRPELVRPALENSLKKAQLDYVDLYLIHSPMSLKPGEELSPTDENGKVIFDIVDLCTTWEAMEKCKDAGLAKSIGVSNFNRRQLEMILNKPGLKYKPVCNQVECHPYFNRSKLLDFCKSKDIVLVAYSALGSQRDKRWVDPNSPVLLEDPVLCALAKKHKRTPALIALRYQLQRGVVVLAKSYNEQRIRQNVQVFEFQLTAEDMKAIDGLDRNLHYFNSDSFASHPNYPYS 320
                                    15        25        35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215       225       235       245       255       265       275       285       295       305       315

Chain B from PDB  Type:PROTEIN  Length:314
                                                                                                                                                                                                                                                                                                                                                          
               SCOP domains d4famb_ B: Prostaglandin d2 11-ketoreductase (akr1c3)                                                                                                                                                                                                                                                                      SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eee.....eee.eeee........hhhhhhhhhhhhhhh..eee.hhhhhhhhhhhhhhhhhhhh...hhhhheeeeeehhhhhhhhhhhhhhhhhhhhh....eeeeee..........................hhhhhhhhhhhhhhh..eeeeeee..hhhhhhhhhh.........eeeee......hhhhhhhhhhh..eeeee.................hhhhhhhhhhhhhhhh.hhhhhhhhhhhhh..eeeee..hhhhhhhhhhhhhh..hhhhhhhhhh.........hhhhhh...... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4fam B   6 QCVKLNDGHFMPVLGFGTYAPPEVPRSKALEVTKLAIEAGFRHIDSAHLYNNEEQVGLAIRSKIADGSVKREDIFYTSKLWSTFHRPELVRPALENSLKKAQLDYVDLYLIHSPMSLKPGEELSPTDENGKVIFDIVDLCTTWEAMEKCKDAGLAKSIGVSNFNRRQLEMILNKPGLKYKPVCNQVECHPYFNRSKLLDFCKSKDIVLVAYSALGSQRDKRWVDPNSPVLLEDPVLCALAKKHKRTPALIALRYQLQRGVVVLAKSYNEQRIRQNVQVFEFQLTAEDMKAIDGLDRNLHYFNSDSFASHPNYPY 319
                                    15        25        35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215       225       235       245       255       265       275       285       295       305       315

Legend:		→ Mismatch	(orange background)
	-	→ Gap	(green background, '-', border residues have a numbering label)
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	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

Asymmetric Unit

Classes(

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Folds(

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Superfamilies( (-)

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Families(

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Protein Domains( (-)

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Organisms( (-)

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Class: Alpha and beta proteins (a/b) (23833)

Fold: TIM beta/alpha-barrel (3956)

Superfamily: NAD(P)-linked oxidoreductase (286)

Family: Aldo-keto reductases (NADP) (251)

Protein domain: Prostaglandin d2 11-ketoreductase (akr1c3) (30)

Human (Homo sapiens) [TaxId: 9606] (30)

1a	d4fama_	A:
1b	d4famb_	B:

(no "CATH Domain" information available for 4FAM)

(no "Pfam Domain" information available for 4FAM)

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	1.1.1.112
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	1.1.1.188
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	1.1.1.213
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	1.1.1.63
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Description

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Chains, Units

Ligands, Modified Residues, Ions (3, 13)

Sites (13, 13)

SS Bonds (0, 0)

Cis Peptide Bonds (0, 0)

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