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(-) Description

Title :  STRUCTURE OF HISF-D130V+D176V WITH BOUND RCDRP
 
Authors :  B. Reisinger, M. Bocola, C. Rajendran, F. List, R. Sterner
Date :  27 Apr 12  (Deposition) - 05 Dec 12  (Release) - 05 Dec 12  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.90
Chains :  Asym./Biol. Unit :  D
Keywords :  Lyase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  B. Reisinger, M. Bocola, F. List, J. Claren, C. Rajendran, R. Sterner
A Sugar Isomerization Reaction Established On Various (Beta-Alpha)8-Barrel Scaffolds Is Based On Substrate-Assisted Catalysis
Protein Eng. Des. Sel. V. 25 751 2012
PubMed-ID: 23109729  |  Reference-DOI: 10.1093/PROTEIN/GZS080

(-) Compounds

Molecule 1 - IMIDAZOLE GLYCEROL PHOSPHATE SYNTHASE SUBUNIT HISF
    Chains: D
    EC Number: 4.1.3.-
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PET
    Expression System Taxid: 562
    Expression System Vector Type: PLASMID
    Gene: HISF, TM_1036
    Mutation: YES
    Organism Scientific: THERMOTOGA MARITIMA
    Organism Taxid: 2336
    Synonym: IGP SYNTHASE CYCLASE SUBUNIT, IGP SYNTHASE SUBUNIT HISF, IMGP SYNTHASE SUBUNIT HISF, IGPS SUBUNIT HISF

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : D

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 1)

Asymmetric/Biological Unit (1, 1)
No.NameCountTypeFull Name
10VR1Ligand/Ion1-(O-CARBOXY-PHENYLAMINO)-1-DEOXY-D-RIBULOSE-5-PHOSPHATE

(-) Sites  (1, 1)

Asymmetric Unit (1, 1)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREVAL D:130 , LYS D:146 , GLY D:177 , SER D:201 , GLY D:202 , GLY D:203 , LEU D:222 , ALA D:223 , ALA D:224 , SER D:225 , HOH D:502 , HOH D:503 , HOH D:532BINDING SITE FOR RESIDUE 0VR D 400

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4EWN)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 4EWN)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4EWN)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4EWN)

(-) Exons   (0, 0)

(no "Exon" information available for 4EWN)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain D from PDB  Type:PROTEIN  Length:243
                                                                                                                                                                                                                                                                                   
               SCOP domains d4ewnd_ D: automated matches                                                                                                                                                                                                                        SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeeeeeeee..ee.............hhhhhhhhhhhhh..eeeeee...hhhhhhhhhhhhh...eeee....hhhhhhhhhhh...eeeehhhhhhhhhhhhhhhhhhh...eeeeeeeeee..eeeeee....eeeeeehhhhhhhhhhhh..eeeee...........hhhhhhhhhhhh...eeee....hhhhhhhhhhh...eeeehhhhhh...hhhhhhhhhhhh...... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4ewn D   2 LAKRIIACLDVKDGRVVKGTNFENLRDSGDPVELGKFYSEIGIDELVFLDITKTMLELVEKVAEQIDIPFTVGGGIHDFETASELILRGADKVSINTAAVENPSLITQIAQTFGSQAVVVAIVAKRVDGEFMVFTYSGKKNTGILLRDWVVEVEKRGAGEILLTSIDRVGTKSGYDTEMIRFVRPLTTLPIIASGGAGKMEHFLEAFLAGADAALAASVFHFREIDVRELKEYLKKHGVNVRL 250
                                    11        21        31        41        51 ||     67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247   
                                                                              53|                                                                                                                                                                                              
                                                                               60
   Legend:   → Mismatch (orange background)
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  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 1)

Asymmetric/Biological Unit
(-)
Class: Alpha and beta proteins (a/b) (23833)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4EWN)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4EWN)

(-) Gene Ontology  (8, 8)

Asymmetric/Biological Unit(hide GO term definitions)

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  4ewn
    Family and Domain Information: ProDom | SYSTERS
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  HIS6_THEMA | Q9X0C6
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  4.1.3.-
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  HIS6_THEMA | Q9X0C6
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        HIS6_THEMA | Q9X0C6: 1gpw 1thf 1vh7 2a0n 2lle 2w6r 2wjz 3cwo 3og3 3zr4 4fx7 4j9j 5tql

(-) Related Entries Specified in the PDB File

(no "Related Entries Specified in the PDB File" available for 4EWN)