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(-) Description

Title :  STRUCTURE OF A COMPLEX BETWEEN S. CEREVISIAE CSM1 AND MAM1
 
Authors :  K. D. Corbett, S. C. Harrison
Date :  11 Jul 16  (Deposition) - 20 Jul 16  (Release) - 20 Jul 16  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  3.05
Chains :  Asym./Biol. Unit :  A,B,C
Keywords :  Monopolin, Replication (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  K. D. Corbett, S. C. Harrison
Molecular Architecture Of The Yeast Monopolin Complex.
Cell Rep V. 1 583 2012
PubMed-ID: 22813733  |  Reference-DOI: 10.1016/J.CELREP.2012.05.012

(-) Compounds

Molecule 1 - MONOPOLIN COMPLEX SUBUNIT CSM1
    Chains: A, B
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Gene: CSM1, SPO86, YCR086W, YCR86W
    Organism Common: BAKER'S YEAST
    Organism Scientific: SACCHAROMYCES CEREVISIAE
    Organism Taxid: 4932
    Synonym: CHROMOSOME SEGREGATION IN MEIOSIS PROTEIN 1
 
Molecule 2 - MONOPOLIN COMPLEX SUBUNIT MAM1
    Chains: C
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Gene: MAM1, YER106W
    Organism Common: BAKER'S YEAST
    Organism Scientific: SACCHAROMYCES CEREVISIAE
    Organism Taxid: 4932
    Synonym: MONOPOLAR MICROTUBULE ATTACHMENT DURING MEIOSIS 1 PROTEIN 1

 Structural Features

(-) Chains, Units

  123
Asymmetric/Biological Unit : ABC

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 5KTB)

(-) Sites  (0, 0)

(no "Site" information available for 5KTB)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 5KTB)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 5KTB)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 5KTB)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 5KTB)

(-) Exons   (0, 0)

(no "Exon" information available for 5KTB)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:151
                                                                                                                                                                                       
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhheeeeeeee....eeeeeeee......eeeeeeee...eeeeee.....hhhhhhhhhhhhhhhhhh.eeee.hhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5ktb A  20 LLVANLVNENFVLSEKLDTKATEIKQLQKQIDSLNAQVKELKTQTSQQAENSEVIKDLYEYLCNVRVHKSYEDDSGLWFDISQGTHSDYSIMDYKLGFVVTEVIYAPVLKQRSTEELYSLQSKLPEYLFETLSFPLSSLNQFYNKIAKSLN 180
                                    29        39        49        59        69        79        89        99      |114       129       139       149       159       169       179 
                                                                                                                106|        123|                                                   
                                                                                                                 112         129                                                   


Chain B from PDB  Type:PROTEIN  Length:158
                                                                                                                                                                                              
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhheeeeeeee...eeeeeeee....eeeeeeee......eeeee.....hhhhhhhhhhhhhhhhhh.eeehhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5ktb B  13 QQIDSADLLVANLVNENFVLSEKLDTKATEIKQLQKQIDSLNAQVKELKTQTSQQAENSEVIKDLYEYLCNVRVHKSYEDDSGLWFDISQGTSIMDYKLGFVKAQVTEVIYAPVLKQRSTEELYSLQSKLPEYLFETLSFPLSSLNQFYNKIAKSLNK 181
                                    22        32        42        52        62        72        82        92       102 ||    121  ||   133       143       153       163       173        
                                                                                                                     104|       124|                                                      
                                                                                                                      114        127                                                      


Chain C from PDB  Type:PROTEIN  Length:42
                                                                          
               SCOP domains ------------------------------------------ SCOP domains
               CATH domains ------------------------------------------ CATH domains
               Pfam domains ------------------------------------------ Pfam domains
         Sec.struct. author ........hhhhhhhhhhhhhh..hhhhhhhhh......... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------ PROSITE
                 Transcript ------------------------------------------ Transcript
                 5ktb C 222 KKRFLPQSVLIKREDEIAFDDFHLDARKVLNDLSATSENPFS 263
                                   231       241       251       261
   Legend:   → Mismatch (orange background)
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  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 5KTB)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 5KTB)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 5KTB)

(-) Gene Ontology  (21, 28)

Asymmetric/Biological Unit(hide GO term definitions)

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  CSM1_YEAST | P25651
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  MAM1_YEAST | P40065
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        CSM1_YEAST | P25651: 3n4r 3n4s 3n4x 3n7n 5v1a 5v3n
        MAM1_YEAST | P40065: 5cyz 5czo

(-) Related Entries Specified in the PDB File

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