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Title :  CRYSTAL STRUCTURE OF A CHIMERIC PROTEIN WITH THE SEC7 DOMAIN OF RICKETTSIA PROWAZEKII RALF AND THE CAPPING DOMAIN OF LEGIONELLA PNEUMOPHILA RALF
 
Authors :  M. Folly-Klan, B. Sancerne, E. Alix, C. R. Roy, J. Cherfils, V. Campanac
Date :  27 Nov 14  (Deposition) - 14 Jan 15  (Release) - 15 Mar 17  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.80
Chains :  Asym./Biol. Unit :  A
Keywords :  Signaling Protein, Guanine Nucleotide Exchange Factor, Bacterial Pathogens, Chimeric Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  M. Folly-Klan, B. Sancerne, E. Alix, C. R. Roy, J. Cherfils, V. Campanacci
On The Use Of Legionella/Rickettsia Chimeras To Investigate The Structure And Regulation Of Rickettsia Effector Ralf.
J. Struct. Biol. V. 189 98 2015
PubMed-ID: 25498244  |  Reference-DOI: 10.1016/J.JSB.2014.12.001

(-) Compounds

Molecule 1 - PROLINE/BETAINE TRANSPORTER, RALF
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PDEST17
    Expression System Strain: BL21(DE3)
    Expression System Taxid: 469008
    Expression System Variant: ROSETTA PLYSS
    Expression System Vector Type: PLASMID
    Fragment: RESIDUES 2-195,195-374
    Organism Scientific: RICKETTSIA PROWAZEKII STR. MADRID E, LEGIONELLA PNEUMOPHILA SUBSP. PNEUMOPHILA STR. PHILADELPHIA 1
    Organism Taxid: 272947, 272624

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 4D7R)

(-) Sites  (0, 0)

(no "Site" information available for 4D7R)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4D7R)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 4D7R)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4D7R)

(-) PROSITE Motifs  (0, 0)

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(-) Exons   (0, 0)

(no "Exon" information available for 4D7R)

(-) Sequences/Alignments

Asymmetric/Biological Unit
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  Number of residues per labelling interval =   
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SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:355
                                                                                                                                                                                                                                                                                                                                                                                                   
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhh......hhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhh...hhhhh.hhhhhhhhh.........hhhhhhhhhhhhhhh...........eeeee..hhhhhhhhhhhhhhh.....hhhhhhhhhh..eeeeee..hhhhhhhhheeeeeeeee.....eeeeeee.....hhhhhh...eeeeee....hhhhhhhhhhhh......eee.....hhhhhhhhhhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4d7r A  -2 YFQGDSLLKNEVIKLFNDKPKSGIARIKKWCTDNNQDFIAETAKIFYEEKSNLNLEFVGDYLGTDGVDNQKVLESFTKQFDFKEKDYLESLRRFLQSFKLPGEAQKIDRLVESFGTHYYEQNLNIDINSKDAAYILAYQTIMLNTDLHNPSIAKSKKMTFEQLKNNLKGTNESKNFNDNFLKKIYDEIEAKPFKLNFVKTSPGYELTSTTLNKDSTFKKLDSFLHSTDVNINTVFPGIGDNVKTTVDQPKSWLSFFTGYKGTITLTDNKTSAQATIQVYTPNIFSKWLFGEQPRVIIQPGQTKESIDLAAKAAADFSSPVKNFKATYDYEVGDLIKAYDNQKKLITIERNLALKE 352
                                     7        17        27        37        47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347
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 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4D7R)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4D7R)

(-) Pfam Domains  (0, 0)

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(-) Gene Ontology  (3, 6)

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/TrEMBL
        Q8RT31_LEGPN | Q8RT31: 1xsz 1xt0 4c7p 4d7q
        Q9ZDF5_RICPR | Q9ZDF5: 4d7q

(-) Related Entries Specified in the PDB File

4d7q CRYSTAL STRUCTURE OF A CHIMERIC PROTEIN WITH THE SEC7 DOMAIN OF LEGIONELLA PNEUMOPHILA RALF AND THE CAPPING DOMAIN OF RICKETTSIA PROWAZEKII RALF