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Title :   CRYSTAL STRUCTURE OF THE RUBELLA VIRUS GLYCOPROTEIN E1 IN ITS POST-FUSION FORM CRYSTALLIZED IN PRESENCE OF 1MM OF CALCIUM ACETATE

Authors :   R. M. Dubois, M. C. Vaney, M. A. Tortorici, R. Al Kurdi, G. Barba-Spaeth

Date :   26 Dec 11 (Deposition) - 09 Jan 13 (Release) - 23 Jan 13 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   1.94

Chains :   Asym./Biol. Unit : A,B,C

Keywords :   Viral Protein, Membrane Fusion (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   R. M. Dubois, M. C. Vaney, M. A. Tortorici, R. A. Kurdi, G. Barba-Spaeth T. Krey, F. A. Rey
Functional And Evolutionary Insight From The Crystal Structure Of Rubella Virus Protein E1.
Nature V. 493 552 2013
PubMed-ID: 23292515 | Reference-DOI: 10.1038/NATURE11741
(for further references see the PDB file header)

Molecule 1 - E1 ENVELOPE GLYCOPROTEIN
	Chains	:	A, B, C
	Engineered	:	YES
	Expression System	:	DROSOPHILA MELANOGASTER
	Expression System Cell Line	:	SCHNEIDER 2
	Expression System Plasmid	:	PMT MODIFIED INVITROGEN
	Expression System Taxid	:	7227
	Expression System Vector Type	:	PLASMID
	Fragment	:	ECTODOMAIN, UNP RESIDUES 583-1018
	Organism Common	:	RUBELLA VIRUS
	Organism Scientific	:	RUBELLA VIRUS
	Organism Taxid	:	11041
	Other Details	:	POLYPROTEIN FRAGMENT RESIDUES 1-435
	Strain	:	M33
	Synonym	:	SPIKE GLYCOPROTEIN E1

		1	2	3
Asymmetric/Biological Unit	:	A	B	C

Summary Information (see also Sequences/Alignments below)

Asymmetric/Biological Unit (5, 17)

No.	Name	Count	Type	Full Name
1	ACT	4	Ligand/Ion	ACETATE ION
2	CA	3	Ligand/Ion	CALCIUM ION
3	GOL	4	Ligand/Ion	GLYCEROL
4	NA	2	Ligand/Ion	SODIUM ION
5	NAG	4	Ligand/Ion	N-ACETYL-D-GLUCOSAMINE

Asymmetric Unit (17, 17)

No.	Name	Evidence	Residues	Description
01	AC1	SOFTWARE	GLN A:79 , ARG A:252 , HOH A:2096 , HOH A:2099 , HOH A:2380 , ALA B:268 , HIS B:298	BINDING SITE FOR RESIDUE GOL A1437
02	AC2	SOFTWARE	THR A:277 , HIS A:290 , ARG A:292	BINDING SITE FOR RESIDUE GOL A1438
03	AC3	SOFTWARE	ASN A:88 , ALA A:89 , ASP A:136 , THR A:137 , HOH A:2114	BINDING SITE FOR RESIDUE NA A1439
04	AC4	SOFTWARE	ASN A:88 , ALA A:89 , ASP A:136 , THR A:137 , HOH A:2114	BINDING SITE FOR RESIDUE CA A1440
05	AC5	SOFTWARE	SER A:91 , SER A:92 , ASP A:136	BINDING SITE FOR RESIDUE ACT A1441
06	AC6	SOFTWARE	SER B:100 , TYR B:101	BINDING SITE FOR RESIDUE GOL B1437
07	AC7	SOFTWARE	ASN B:88 , ALA B:89 , ASP B:136 , THR B:137 , ACT B:1439 , HOH B:2094	BINDING SITE FOR RESIDUE CA B1438
08	AC8	SOFTWARE	ASN B:88 , THR B:135 , ASP B:136 , THR B:137 , CA B:1438	BINDING SITE FOR RESIDUE ACT B1439
09	AC9	SOFTWARE	SER B:92 , ASP B:136	BINDING SITE FOR RESIDUE ACT B1440
10	BC1	SOFTWARE	SER C:100 , TYR C:101 , TYR C:108	BINDING SITE FOR RESIDUE GOL C1437
11	BC2	SOFTWARE	ASP C:314 , HOH C:2255 , HOH C:2258	BINDING SITE FOR RESIDUE ACT C1438
12	BC3	SOFTWARE	ASN C:88 , ALA C:89 , ASP C:136 , THR C:137 , HOH C:2084	BINDING SITE FOR RESIDUE NA C1439
13	BC4	SOFTWARE	ASN C:88 , ALA C:89 , ASP C:136 , THR C:137 , HOH C:2084	BINDING SITE FOR RESIDUE CA C1440
14	BC5	SOFTWARE	GLN A:168 , SER A:175 , ASN A:177	BINDING SITE FOR MONO-SACCHARIDE NAG A1001 BOUND TO ASN A 177
15	BC6	SOFTWARE	GLN B:168 , SER B:175 , ASN B:177	BINDING SITE FOR MONO-SACCHARIDE NAG B1001 BOUND TO ASN B 177
16	BC7	SOFTWARE	HOH B:2311 , TYR C:6 , LEU C:7 , CYS C:8 , ASN C:76	BINDING SITE FOR MONO-SACCHARIDE NAG C2001 BOUND TO ASN C 76
17	BC8	SOFTWARE	GLN C:168 , SER C:175 , ASN C:177 , HOH C:2314	BINDING SITE FOR MONO-SACCHARIDE NAG C1001 BOUND TO ASN C 177

Asymmetric/Biological Unit

No.	Residues
1	A:8	-	A:13
2	A:37	-	A:242
3	A:49	-	A:287
4	A:51	-	A:130
5	A:59	-	A:71
6	A:82	-	A:117
7	A:176	-	A:185
8	A:225	-	A:235
9	A:349	-	A:352
10	A:368	-	A:401
11	B:8	-	B:13
12	B:37	-	B:242
13	B:49	-	B:287
14	B:51	-	B:130
15	B:59	-	B:71
16	B:82	-	B:117
17	B:176	-	B:185
18	B:225	-	B:235
19	B:349	-	B:352
20	B:368	-	B:401
21	C:8	-	C:13
22	C:37	-	C:242
23	C:49	-	C:287
24	C:51	-	C:130
25	C:59	-	C:71
26	C:82	-	C:117
27	C:176	-	C:185
28	C:225	-	C:235
29	C:349	-	C:352
30	C:368	-	C:401

Asymmetric/Biological Unit

No.	Residues
1	Thr A:17	-	Pro A:18
2	Ser A:222	-	Pro A:223
3	Gly A:320	-	Pro A:321
4	Pro A:395	-	Pro A:396
5	Thr B:17	-	Pro B:18
6	Ser B:222	-	Pro B:223
7	Gly B:320	-	Pro B:321
8	Pro B:395	-	Pro B:396
9	Thr C:17	-	Pro C:18
10	Ser C:222	-	Pro C:223
11	Gly C:320	-	Pro C:321
12	Pro C:395	-	Pro C:396

Asymmetric/Biological Unit (1, 3)

								dbSNP	PDB
No.	Source	Variant ID	Variant			UniProt ID	Status	ID	Chain	Variant
1	UniProt	VAR_POLS_RUBVM_005 *	R	609	G	POLS_RUBVM	---	---	A/B/C	R	27	G
	* ID not provided by source

SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)

(no "PROSITE Motif" information available for 4ADJ)

(no "Exon" information available for 4ADJ)

Asymmetric/Biological Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain A from PDB  Type:PROTEIN  Length:431
 aligned with POLS_RUBVM | P08563 from UniProtKB/Swiss-Prot  Length:1063

    Alignment length:435
                                   593       603       613       623       633       643       653       663       673       683       693       703       713       723       733       743       753       763       773       783       793       803       813       823       833       843       853       863       873       883       893       903       913       923       933       943       953       963       973       983       993      1003      1013     
          POLS_RUBVM    584 EAFTYLCTAPGCATQTPVPVRLAGVRFESKIVDGGCFAPWDLEATGACICEIPTDVSCEGLGAWVPTAPCARIWNGTQRACTFWAVNAYSSGGYAQLASYFNPGGSYYKQYHPTACEVEPAFGHSDAACWGFPTDTVMSVFALASYVQHPHKTVRVKFHTETRTVWQLSVAGVSCNVTTEHPFCNTPHGQLEVQVPPDPGDLVEYIMNYTGNQQSRWGLGSPNCHGPDWASPVCQRHSPDCSRLVGATPERPRLRLVDADDPLLRTAPGPGEVWVTPVIGSQARKCGLHIRAGPYGHATVEMPEWIHAHTTSDPWHPPGPLGLKFKTVRPVALPRALAPPRNVRVTGCYQCGTPALVEGLAPGGGNCHLTVNGEDVGAFPPGKFVTAALLNTPPPYQVSCGGESDRASARVIDPAAQSFTGVVYGTHTTAVSETR 1018
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author eeeeee.....eee.....eeeeeeeeeeeeeeeeeee...eeeeeeee................hhhhhhhhhh.eeeeeeeeeee..........hhhh...hhhhhhhh....eeee.................eeeeeeeee....hhheeeeeeeeeeeeeeeee..eeeee.....eeee..eeeeee.......eeeeee.----.eeeeee...........hhhhheee..............eeee....hhhhhh.....eeeeeee........eeeeee.hhh.eeehhhhhhhhhh..........eeeeee..............eeeeeeee......eeeeeee.....eeeee..eeeeee..eeeeeee........eee....eee.eeeeehhhhhhh..eee..eeeee.... Sec.struct. author
                 SAPs(SNPs) -------------------------G------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                4adj A    2 EAFTYLCTAPGCATQTPVPVRLAGVRFESKIVDGGCFAPWDLEATGACICEIPTDVSCEGLGAWVPTAPCARIWNGTQRACTFWAVNAYSSGGYAQLASYFNPGGSYYKQYHPTACEVEPAFGHSDAACWGFPTDTVMSVFALASYVQHPHKTVRVKFHTETRTVWQLSVAGVSCNVTTEHPFCNTPHGQLEVQVPPDPGDLVEYIMN----QQSRWGLGSPNCHGPDWASPVCQRHSPDCSRLVGATPERPRLRLVDADDPLLRTAPGPGEVWVTPVIGSQARKCGLHIRAGPYGHATVEMPEWIHAHTTSDPWHPPGPLGLKFKTVRPVALPRALAPPRNVRVTGCYQCGTPALVEGLAPGGGNCHLTVNGEDVGAFPPGKFVTAALLNTPPPYQVSCGGESDRASARVIDPAAQSFTGVVYGTHTTAVSETR  436
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       | -  |    221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431     
                                                                                                                                                                                                                                         209  214

Chain B from PDB  Type:PROTEIN  Length:431
 aligned with POLS_RUBVM | P08563 from UniProtKB/Swiss-Prot  Length:1063

    Alignment length:434
                                   593       603       613       623       633       643       653       663       673       683       693       703       713       723       733       743       753       763       773       783       793       803       813       823       833       843       853       863       873       883       893       903       913       923       933       943       953       963       973       983       993      1003      1013    
          POLS_RUBVM    584 EAFTYLCTAPGCATQTPVPVRLAGVRFESKIVDGGCFAPWDLEATGACICEIPTDVSCEGLGAWVPTAPCARIWNGTQRACTFWAVNAYSSGGYAQLASYFNPGGSYYKQYHPTACEVEPAFGHSDAACWGFPTDTVMSVFALASYVQHPHKTVRVKFHTETRTVWQLSVAGVSCNVTTEHPFCNTPHGQLEVQVPPDPGDLVEYIMNYTGNQQSRWGLGSPNCHGPDWASPVCQRHSPDCSRLVGATPERPRLRLVDADDPLLRTAPGPGEVWVTPVIGSQARKCGLHIRAGPYGHATVEMPEWIHAHTTSDPWHPPGPLGLKFKTVRPVALPRALAPPRNVRVTGCYQCGTPALVEGLAPGGGNCHLTVNGEDVGAFPPGKFVTAALLNTPPPYQVSCGGESDRASARVIDPAAQSFTGVVYGTHTTAVSET 1017
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author eeeeee.....eee.....eeeeeeeeeeeeeeeeeee...eeeeeeee................hhhhhhhhhh.eeeeeeeeeee..........hhhh...hhhhhhhh....eeee.................eeeeeeeee....hhheeeeeeeeeeeeeeeee..eeeee.....ee....eeeeee.......eeeeee.---..eeeeee...........hhhhheee..............eeee....hhhhhh.....eeeeeeee......eeeeeee.hhh.eeehhhhhhhhhh..........eeeee...............eeeeeeee......eeeeeee.....eeeee..eeeeee..eeeeeee........eee....eee.eeeeehhhhhhh..eee..eeeee... Sec.struct. author
                 SAPs(SNPs) -------------------------G------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                4adj B    2 EAFTYLCTAPGCATQTPVPVRLAGVRFESKIVDGGCFAPWDLEATGACICEIPTDVSCEGLGAWVPTAPCARIWNGTQRACTFWAVNAYSSGGYAQLASYFNPGGSYYKQYHPTACEVEPAFGHSDAACWGFPTDTVMSVFALASYVQHPHKTVRVKFHTETRTVWQLSVAGVSCNVTTEHPFCNTPHGQLEVQVPPDPGDLVEYIMN---NQQSRWGLGSPNCHGPDWASPVCQRHSPDCSRLVGATPERPRLRLVDADDPLLRTAPGPGEVWVTPVIGSQARKCGLHIRAGPYGHATVEMPEWIHAHTTSDPWHPPGPLGLKFKTVRPVALPRALAPPRNVRVTGCYQCGTPALVEGLAPGGGNCHLTVNGEDVGAFPPGKFVTAALLNTPPPYQVSCGGESDRASARVIDPAAQSFTGVVYGTHTTAVSET  435
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       | - |     221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431    
                                                                                                                                                                                                                                         209 213

Chain C from PDB  Type:PROTEIN  Length:432
 aligned with POLS_RUBVM | P08563 from UniProtKB/Swiss-Prot  Length:1063

    Alignment length:435
                                   593       603       613       623       633       643       653       663       673       683       693       703       713       723       733       743       753       763       773       783       793       803       813       823       833       843       853       863       873       883       893       903       913       923       933       943       953       963       973       983       993      1003      1013     
          POLS_RUBVM    584 EAFTYLCTAPGCATQTPVPVRLAGVRFESKIVDGGCFAPWDLEATGACICEIPTDVSCEGLGAWVPTAPCARIWNGTQRACTFWAVNAYSSGGYAQLASYFNPGGSYYKQYHPTACEVEPAFGHSDAACWGFPTDTVMSVFALASYVQHPHKTVRVKFHTETRTVWQLSVAGVSCNVTTEHPFCNTPHGQLEVQVPPDPGDLVEYIMNYTGNQQSRWGLGSPNCHGPDWASPVCQRHSPDCSRLVGATPERPRLRLVDADDPLLRTAPGPGEVWVTPVIGSQARKCGLHIRAGPYGHATVEMPEWIHAHTTSDPWHPPGPLGLKFKTVRPVALPRALAPPRNVRVTGCYQCGTPALVEGLAPGGGNCHLTVNGEDVGAFPPGKFVTAALLNTPPPYQVSCGGESDRASARVIDPAAQSFTGVVYGTHTTAVSETR 1018
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author eeeeee.....eee.....eeeeeeeeeeeeeeeeeee...eeeeeeee................hhhhhhhhhh.eeeeeeeeeee..........hhhh...hhhhhhhh....eeee.................eeeeeeeee....hhheeeeeeeeeeeeeeeee..eeeee.....eeee..eeeeee.......eeeeee.---..eeeeee...........hhhhheee..............eeee....hhhhhh.....eeeeeeee......eeeeeee.hhh.eeehhhhhhhhhh..........eeeeee..............eeeeeeee......eeeeeee.....eeeee..eeeeee..eeeeeee........eee....eee.eeeeehhhhhhh..eee..eeeee.... Sec.struct. author
                 SAPs(SNPs) -------------------------G------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                4adj C    2 EAFTYLCTAPGCATQTPVPVRLAGVRFESKIVDGGCFAPWDLEATGACICEIPTDVSCEGLGAWVPTAPCARIWNGTQRACTFWAVNAYSSGGYAQLASYFNPGGSYYKQYHPTACEVEPAFGHSDAACWGFPTDTVMSVFALASYVQHPHKTVRVKFHTETRTVWQLSVAGVSCNVTTEHPFCNTPHGQLEVQVPPDPGDLVEYIMN---NQQSRWGLGSPNCHGPDWASPVCQRHSPDCSRLVGATPERPRLRLVDADDPLLRTAPGPGEVWVTPVIGSQARKCGLHIRAGPYGHATVEMPEWIHAHTTSDPWHPPGPLGLKFKTVRPVALPRALAPPRNVRVTGCYQCGTPALVEGLAPGGGNCHLTVNGEDVGAFPPGKFVTAALLNTPPPYQVSCGGESDRASARVIDPAAQSFTGVVYGTHTTAVSETR  436
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       | - |     221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431     
                                                                                                                                                                                                                                         209 213

Legend:		→ Mismatch	(orange background)
	-	→ Gap	(green background, '-', border residues have a numbering label)
		→ Modified Residue	(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

(no "SCOP Domain" information available for 4ADJ)

(no "CATH Domain" information available for 4ADJ)

(no "Pfam Domain" information available for 4ADJ)

Asymmetric/Biological Unit(hide GO term definitions)

Chain A,B,C (POLS_RUBVM | P08563)

molecular function
	GO:0003723	RNA binding	Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
	GO:0005515	protein binding	Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
biological process
	GO:0075512	clathrin-dependent endocytosis of virus by host cell	Any clathrin-mediated endocytosis that is involved in the uptake of a virus into a host cell. Begins by invagination of a specific region of the host cell plasma membrane around the bound virus to form a clathrin-coated pit, which then pinches off to form a clathrin-coated endocytic vesicle containing the virus.
	GO:0075509	endocytosis involved in viral entry into host cell	Any endocytosis that is involved in the uptake of a virus into a host cell.
	GO:0039654	fusion of virus membrane with host endosome membrane	Fusion of a virus membrane with a host endosome membrane. Occurs after internalization of the virus through the endosomal pathway, and results in release of the virus contents into the cell.
	GO:0039663	membrane fusion involved in viral entry into host cell	Merging of the virion membrane and a host membrane (host plasma membrane or host organelle membrane) that is involved in the uptake of a virus into a host cell.
	GO:0046718	viral entry into host cell	The process that occurs after viral attachment by which a virus, or viral nucleic acid, breaches the plasma membrane or cell envelope and enters the host cell. The process ends when the viral nucleic acid is released into the host cell cytoplasm.
	GO:0016032	viral process	A multi-organism process in which a virus is a participant. The other participant is the host. Includes infection of a host cell, replication of the viral genome, and assembly of progeny virus particles. In some cases the viral genetic material may integrate into the host genome and only subsequently, under particular circumstances, 'complete' its life cycle.
	GO:0019062	virion attachment to host cell	The process by which a virion protein binds to molecules on the host cellular surface or host cell surface projection.
cellular component
	GO:0039619	T=4 icosahedral viral capsid	The protein coat that surrounds the infective nucleic acid in some virus particles where the subunits (capsomeres) are arranged to form an icosahedron with T=4 symmetry. The T=4 capsid is composed of 12 pentameric and 30 hexameric capsomeres.
	GO:0044177	host cell Golgi apparatus	A compound membranous cytoplasmic organelle of eukaryotic host cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack.
	GO:0044178	host cell Golgi membrane	The lipid bilayer surrounding any of the compartments of the host cell Golgi apparatus.
	GO:0030430	host cell cytoplasm	The cytoplasm of a host cell.
	GO:0033644	host cell membrane	Double layer of lipid molecules as it encloses host cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins. The host is defined as the larger of the organisms involved in a symbiotic interaction.
	GO:0033650	host cell mitochondrion	A semiautonomous, self replicating organelle as found in host cells that occurs in varying numbers, shapes, and sizes in the cell cytoplasm. The host is defined as the larger of the organisms involved in a symbiotic interaction.
	GO:0016021	integral component of membrane	The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
	GO:0016020	membrane	A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
	GO:0019028	viral capsid	The protein coat that surrounds the infective nucleic acid in some virus particles. It comprises numerous regularly arranged subunits, or capsomeres.
	GO:0019031	viral envelope	The lipid bilayer of a virion that surrounds the protein capsid. May also contain glycoproteins.
	GO:0019013	viral nucleocapsid	The complete protein-nucleic acid complex that is the packaged form of the genome in a virus particle.
	GO:0019012	virion	The complete fully infectious extracellular virus particle.
	GO:0055036	virion membrane	The lipid bilayer surrounding a virion.

Asymmetric/Biological Unit
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	Cis Peptide Bonds
		Gly A:320 - Pro A:321	[ RasMol ]
		Gly B:320 - Pro B:321	[ RasMol ]
		Gly C:320 - Pro C:321	[ RasMol ]
		Pro A:395 - Pro A:396	[ RasMol ]
		Pro B:395 - Pro B:396	[ RasMol ]
		Pro C:395 - Pro C:396	[ RasMol ]
		Ser A:222 - Pro A:223	[ RasMol ]
		Ser B:222 - Pro B:223	[ RasMol ]
		Ser C:222 - Pro C:223	[ RasMol ]
		Thr A:17 - Pro A:18	[ RasMol ]
		Thr B:17 - Pro B:18	[ RasMol ]
		Thr C:17 - Pro C:18	[ RasMol ]

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	4adj
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		Interatomic Contacts of Structural Units	:	CSU
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	POLS_RUBVM \| P08563
		Protein Disorder Prediction	:	DisEMBL \| FoldIndex \| GLOBPLOT (for more information see DisProt)

UniProtKB/Swiss-Prot
	POLS_RUBVM \| P08563	:	4adg 4adi 4b3v 4har 4hbe 4hbo 5khc

4adg	CRYSTAL STRUCTURE OF THE RUBELLA VIRUS ENVELOPE GLYCOPROTEIN E1 IN POST-FUSION FORM (CRYSTAL FORM II)
4adi	CRYSTAL STRUCTURE OF THE RUBELLA VIRUS ENVELOPE GLYCOPROTEIN E1 IN POST-FUSION FORM (CRYSTAL FORM I)
4b3v	CRYSTAL STRUCTURE OF THE RUBELLA VIRUS GLYCOPROTEIN E1 IN ITS POST-FUSION FORM CRYSTALLIZED IN PRESENCE OF 20MM OF CALCIUM ACETATE

Description

Compounds

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (5, 17)

Sites (17, 17)

SS Bonds (30, 30)

Cis Peptide Bonds (12, 12)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (1, 3)

PROSITE Motifs (0, 0)

Exons (0, 0)

Sequences/Alignments

Classification and Annotation

SCOP Domains (0, 0)

CATH Domains (0, 0)

Pfam Domains (0, 0)

Gene Ontology (22, 22)

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Still Images

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Databases

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Related Entries

Entries Sharing at Least One Protein Chain (UniProt ID)

Related Entries Specified in the PDB File