4A00 - JenaLib

Asymmetric Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain A from PDB  Type:PROTEIN  Length:396
 aligned with AAT_ECOLI | P00509 from UniProtKB/Swiss-Prot  Length:396

    Alignment length:396
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390      
            AAT_ECOLI     1 MFENITAAPADPILGLADLFRADERPGKINLGIGVYKDETGKTPVLTSVKKAEQYLLENETTKNYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQTPGGTGALRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHGCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLEEDAEGLRAFAAMHKELIVASSYSKNFGLYNERVGACTLVAADSETVDRAFSQMKAAIRANYSNPPAHGASVVATILSNDALRAIWEQELTDMRQRIQRMRQLFVNTLQEKGANRDFSFIIKQNGMFSFSGLTKEQVLRLREEFGVYAVASGRVNVAGMTPDNMAPLCEAIVAVL 396
               SCOP domains d4a00a_ A: Aspartate aminotransferase, AAT                                                                                                                                                                                                                                                                                                                                                                   SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ..........hhhhhhhhhhhhh.....ee...............hhhhhhhhhhhhhhh..........hhhhhhhhhhhhhh..hhhhhh..eeeeeeehhhhhhhhhhhhhhhhh...eeeee....hhhhhhhhhh..eeeee..ee....eehhhhhhhhhh......eeeee...........hhhhhhhhhhhhhhhh.eeeeee.......hhhhhhhhhhhhhhhh..eeeeee......hhhh.eeeeeee..hhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhh.....eee...hhhhhhhhhhhhhee.....eee.hhh...hhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AA_TRANSFER_CL-------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 4a00 A   1 MFENITAAPADPILGLADLFRADERPGKINLGQGVYKDETGKTPVLTSVKKAEQYLLENETTKNYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQTPGGTGALRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHGCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAQQGFARGLEEDAEGLRAFAAMHKELIVASSYSKNFGLYNERVGACTLVAADSETVDRAFSQMKAAIYANYSNPPAHGASVVATILSNDALRAIWEQELTDMRQRIQRMRQLFVNTLQEKGANRDFSFIIKQNGMFSFSGLTKEQVLRLREEFGVYAVASGRVNVAGMTPDNMAPLCEAIVAVL 396
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390

Legend:		→ Mismatch	(orange background)
	-	→ Gap	(green background, '-', border residues have a numbering label)
		→ Modified Residue	(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

Classification and Annotation

SCOP Domains (1, 1)

CATH Domains (0, 0)

Pfam Domains (0, 0)

Gene Ontology (14, 14)

Asymmetric Unit(hide GO term definitions)

Chain A (AAT_ECOLI | P00509)

molecular function
	GO:0004069	L-aspartate:2-oxoglutarate aminotransferase activity	Catalysis of the reaction: L-aspartate + 2-oxoglutarate = oxaloacetate + L-glutamate.
	GO:0080130	L-phenylalanine:2-oxoglutarate aminotransferase activity	Catalysis of the reaction: L-phenylalanine + 2-oxoglutarate = phenylpyruvate + L-glutamate.
	GO:0004838	L-tyrosine:2-oxoglutarate aminotransferase activity	Catalysis of the reaction: L-tyrosine + 2-oxoglutarate = 4-hydroxyphenylpyruvate + L-glutamate.
	GO:0003824	catalytic activity	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
	GO:0042802	identical protein binding	Interacting selectively and non-covalently with an identical protein or proteins.
	GO:0030170	pyridoxal phosphate binding	Interacting selectively and non-covalently with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6.
	GO:0008483	transaminase activity	Catalysis of the transfer of an amino group to an acceptor, usually a 2-oxo acid.
	GO:0016740	transferase activity	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2.
biological process
	GO:0009094	L-phenylalanine biosynthetic process	The chemical reactions and pathways resulting in the formation of L-phenylalanine, the L-enantiomer of 2-amino-3-phenylpropanoic acid, i.e. (2S)-2-amino-3-phenylpropanoic acid.
	GO:0033585	L-phenylalanine biosynthetic process from chorismate via phenylpyruvate	The chemical reactions and pathways resulting in the formation of L-phenylalanine from other compounds, including chorismate, via the intermediate phenylpyruvate.
	GO:0009058	biosynthetic process	The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones.
	GO:0006520	cellular amino acid metabolic process	The chemical reactions and pathways involving amino acids, carboxylic acids containing one or more amino groups, as carried out by individual cells.
cellular component
	GO:0005737	cytoplasm	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
	GO:0005829	cytosol	The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.

Visualization

Interactive Views

Asymmetric Unit
	Complete Structure
		Jena3D(integrated viewing of ligand, site, SAP, PROSITE, SCOP information)
		WebMol \| AstexViewer[tm]@PDBe (Java Applets, require no local installation except for Java; loading may be slow)
		STRAP (Java WebStart application, automatic local installation, requires Java; full application with system access!)
		RasMol (require local installation)
		Molscript (VRML) (requires installation of a VRML viewer; select preferred view via VRML and generate a mono or stereo PDF format file)

	Ligands, Modified Residues, Ions
		GOL	[ RasMol \| Jena3D ]	+environment [ RasMol \| Jena3D ]
		PEG	[ RasMol \| Jena3D ]	+environment [ RasMol \| Jena3D ]
		PP3	[ RasMol \| Jena3D ]	+environment [ RasMol \| Jena3D ]

	Sites
		AC1	[ RasMol ]	+environment [ RasMol ]
		AC2	[ RasMol ]	+environment [ RasMol ]
		AC3	[ RasMol ]	+environment [ RasMol ]
		AC4	[ RasMol ]	+environment [ RasMol ]
		AC5	[ RasMol ]	+environment [ RasMol ]
		AC6	[ RasMol ]	+environment [ RasMol ]
		AC7	[ RasMol ]	+environment [ RasMol ]

	Cis Peptide Bonds
		Asn A:127 - Pro A:128	[ RasMol ]
		Asn A:183 - Pro A:184	[ RasMol ]

Biological Unit
	Complete Structure
		Biological Unit 1	[ Jena3D ]

Still Images

Databases and Analysis Tools

Databases

Access by PDB/NDB ID
	4a00
		Family and Domain Information	:	ProDom \| SYSTERS
		General Structural Information	:	GlycoscienceDB \| MMDB \| NDB \| OCA \| PDB \| PDBe \| PDBj \| PDBsum \| PDBWiki \| PQS \| PROTEOPEDIA
		Orientation in Membranes	:	OPM
		Protein Surface	:	SURFACE
		Secondary Structure	:	DSSP (structure derived) \| HSSP (homology derived)
		Structural Genomics	:	GeneCensus
		Structural Neighbours	:	CE \| VAST
		Structure Classification	:	CATH \| Dali \| SCOP
		Validation and Original Data	:	BMRB Data View \| BMRB Restraints Grid \| EDS \| PROCHECK \| RECOORD \| WHAT_CHECK

Access by UniProt ID/Accession number
	AAT_ECOLI \| P00509
		Comparative Protein Structure Models	:	ModBase
		Genomic Information	:	Ensembl
		Protein-protein Interaction	:	DIP
		Sequence, Family and Domain Information	:	InterPro \| Pfam \| SMART \| UniProtKB/SwissProt

Access by Enzyme Classificator (EC Number)
	2.6.1.1
		General Enzyme Information	:	BRENDA \| EC-PDB \| Enzyme \| IntEnz
		Pathway	:	KEGG \| MetaCyc

Access by Disease Identifier (MIM ID)
	(no 'MIM ID' available)
		Disease Information	:	OMIM

Access by GenAge ID
	(no 'GenAge ID' available)
		Age Related Information	:	GenAge

Analysis Tools

Related Entries

Entries Sharing at Least One Protein Chain (UniProt ID)

Related Entries Specified in the PDB File

1aam	ASPARTATE AMINOTRANSFERASE MUTANT WITH ARG 292 REPLACED BY ASP (R292D) COMPLEX WITH PYRIDOXAL-5'-PHOSPHATE AND SULFATE
1aaw	ASPARTATE AMINOTRANSFERASE WILD TYPE COMPLEX WITH PYRIDOXAL-5'-PHOSPHATE
1ahe	ASPARTATE AMINOTRANSFERASE HEXAMUTANT
1ahf	ASPARTATE AMINOTRANSFERASE HEXAMUTANT
1ahg	ASPARTATE AMINOTRANSFERASE HEXAMUTANT
1ahx	ASPARTATE AMINOTRANSFERASE HEXAMUTANT
1ahy	ASPARTATE AMINOTRANSFERASE HEXAMUTANT
1aia	ASPARTATE AMINOTRANSFERASE (HOLO FORM) MUTANT WITH LYS 258 REPLACED BY HIS (K258H) COMPLEXED WITH PYRIDOXAMINE -5'-PHOSPHATE
1aib	ASPARTATE AMINOTRANSFERASE MUTANT WITH LYS 258 REPLACED BY HIS (K258H) COMPLEXED WITH PYRIDOXAMINE-5'- PHOSPHATE AND 2-OXO-GLUTARATE
1aic	ASPARTATE AMINOTRANSFERASE MUTANT WITH LYS 258 REPLACED BY HIS (K258H) COMPLEXED WITH PYRIDOXAMINE-5'- PHOSPHATE AND SULFATE
1amq	ASPARTATE AMINOTRANSFERASE COMPLEXED WITH PYRIDOXAMINE 5'- PHOSPHATE
1amr	ASPARTATE AMINOTRANSFERASE COMPLEXED WITH PYRIDOXAMINE 5'- PHOSPHATE AND MALEATE
1ams	ASPARTATE AMINOTRANSFERASE COMPLEXED WITH PYRIDOXAMINE 5'- PHOSPHATE AND GLUTARATE
1arg	ASPARTATE AMINOTRANSFERASE, PHOSPHO-5'-PYRIDOXYL ASPARTATE COMPLEX
1arh	ASPARTATE AMINOTRANSFERASE, Y225R/R386A MUTANT
1ari	ASPARTATE AMINOTRANSFERASE, W140H MUTANT, MALEATE COMPLEX
1ars	ASPARTATE AMINOTRANSFERASE COMPLEXED WITH PYRIDOXAL-5'- PHOSPHATE
1art	ASPARTATE AMINOTRANSFERASE COMPLEXED WITH PYRIDOXAL-5'- PHOSPHATE AND 2-METHYLASPARTATE
1asa	ASPARTATE AMINOTRANSFERASE WILD TYPE COMPLEXED WITH PYRIDOXAL-5'-PHOSPHATE AND MALEATE
1asb	ASPARTATE AMINOTRANSFERASE MUTANT WITH ASP 223 REPLACED BY ALA (D223A) AND COMPLEXED WITH PYRIDOXAL-5'- PHOSPHATE AND MALEATE
1asc	ASPARTATE AMINOTRANSFERASE MUTANT WITH ASP 223 REPLACED BY ALA (D223A) AND COMPLEXED WITH N-METHYL-PYRIDOXAL- 5'-PHOSPHATE
1asd	ASPARTATE AMINOTRANSFERASE WILD TYPE COMPLEXED WITH N- METHYL-PYRIDOXAL-5'-PHOSPHATE AND MALEATE
1ase	ASPARTATE AMINOTRANSFERASE WILD TYPE COMPLEXED WITH PYRIDOXAL-5'-PHOSPHATE-N-OXIDE AND MALEATE
1asf	ASPARTATE AMINOTRANSFERASE MUTANT WITH TYR 226 REPLACED BY PHE (Y226F) AND COMPLEXED WITH PYRIDOXAL-5'- PHOSPHATE AND SULFATE
1asg	ASPARTATE AMINOTRANSFERASE MUTANT WITH TYR 226 REPLACED BY PHE (Y226F) AND COMPLEXED WITH PYRIDOXAL-5'- PHOSPHATE AND MALEATE
1asl	ASPARTATE AMINOTRANSFERASE (WILD TYPE) COMPLEX WITH 2- METHYLASPARTYL-PYRIDOXAL-5'-PHOSPHATE
1asm	ASPARTATE AMINOTRANSFERASE (WILD TYPE, PYRIDOXAL-5'- PHOSPHATE FORM) COMPLEX WITH MALEATE
1asn	ASPARTATE AMINOTRANSFERASE (WILD TYPE, PYRIDOXAL-5'- PHOSPHATE FORM) COMPLEX WITH SULFATE
1b4x	ASPARTATE AMINOTRANSFERASE FROM E. COLI, C191S MUTATION, WITH BOUND MALEATE
1bqa	ASPARTATE AMINOTRANSFERASE P195A MUTANT
1bqd	ASPARTATE AMINOTRANSFERASE P138A/P195A DOUBLE MUTANT
1c9c	ASPARTATE AMINOTRANSFERASE COMPLEXED WITH C3-PYRIDOXAL-5 '-PHOSPHATE
1cq6	ASPARTATE AMINOTRANSFERASE COMPLEX WITH C4-PYRIDOXAL-5P- PHOSPHATE
1cq7	ASPARTATE AMINOTRANSFERASE (E.C. 2.6.1.1) COMPLEXED WITH C5-PYRIDOXAL- 5P- PHOSPHATE
1cq8	ASPARTATE AMINOTRANSFERASE (E.C. 2.6.1.1) COMPLEXED WITH C6-PYRIDOXAL- 5P- PHOSPHATE
1czc	ASPARTATE AMINOTRANSFERASE MUTANT ATB17/139S/142N WITH GLUTARIC ACID
1cze	ASPARTATE AMINOTRANSFERASE MUTANT ATB17/139S/142N WITH SUCCINIC ACID
1g4v	ASPARTATE AMINOTRANSFERASE ACTIVE SITE MUTANT N194A/Y225F
1g4x	ASPARTATE AMINOTRANSFERASE ACTIVE SITE MUTANT N194A/R292L
1g7w	ASPARTATE AMINOTRANSFERASE ACTIVE SITE MUTANT N194A/R386L
1g7x	ASPARTATE AMINOTRANSFERASE ACTIVE SITE MUTANTN194A/R292L/ R386L
1ix6	ASPARTATE AMINOTRANSFERASE ACTIVE SITE MUTANT V39F
1ix7	ASPARTATE AMINOTRANSFERASE ACTIVE SITE MUTANT V39F MALEATECOMPLEX
1ix8	ASPARTATE AMINOTRANSFERASE ACTIVE SITE MUTANT V39F/N194A
1qir	ASPARTATE AMINOTRANSFERASE FROM ESCHERICHIA COLI, C191YMUTATION, WITH BOUND MALEATE
1qis	ASPARTATE AMINOTRANSFERASE FROM ESCHERICHIA COLI, C191FMUTATION, WITH BOUND MALEATE
1qit	ASPARTATE AMINOTRANSFERASE FROM ESCHERICHIA COLI, C191WMUTATION, WITH BOUND MALEATE
1spa	ASPARTATE AMINOTRANSFERASE MUTANT WITH ASP 222 REPLACED BY ALA (D222A) RECONSTRUCTED WITH N(1)-METHYLATED PYRIDOXAL-5'-PHOSPHATE
1toe	UNLIGANDED STRUCTURE OF HEXAMUTANT + A293D MUTANT OF E. COLI ASPARTATE AMINOTRANSFERASE
1tog	HYDROCINNAMIC ACID-BOUND STRUCTURE OF SRHEPT + A293D MUTANTOF E. COLI ASPARTATE AMINOTRANSFERASE
1toi	HYDROCINNAMIC ACID-BOUND STRUCTURE OF HEXAMUTANT + A293DMUTANT OF E. COLI ASPARTATE AMINOTRANSFERASE
1toj	HYDROCINNAMIC ACID-BOUND STRUCTURE OF SRHEPT MUTANT OF E.COLI ASPARTATE AMINOTRANSFERASE
1tok	MALEIC ACID-BOUND STRUCTURE OF SRHEPT MUTANT OF E. COLIASPARTATE AMINOTRANSFERASE
1yoo	ASPARTATE AMINOTRANSFERASE MUTANT ATB17 WITH ISOVALERIC ACID
2aat	ASPARTATE AMINOTRANSFERASE MUTANT K258A COMPLEX WITH PYRIDOXAMINE PHOSPHATE (PMP)
3aat	ASPARTATE AMINOTRANSFERASE (MUTANT WITH ARG 386 REPLACED BY PHE) (R386F) COMPLEX WITH PYRIDOXAL-5'-PHOSPHATE AND SULFATE
3zzj	STRUCTURE OF AN ENGINEERED ASPARTATE AMINOTRANSFERASE
3zzk	STRUCTURE OF AN ENGINEERED ASPARTATE AMINOTRANSFERASE
5eaa	ASPARTATE AMINOTRANSFERASE FROM E. COLI, C191S MUTATION

Description

Compounds

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (3, 7)

Sites (7, 7)

SS Bonds (0, 0)

Cis Peptide Bonds (2, 2)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (0, 0)

PROSITE Motifs (1, 1)

Exons (0, 0)

Sequences/Alignments