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(-) Description

Title :  STRUCTURE OF FTMOX1 WITH FUMITREMORGEN B COMPLEX
 
Authors :  W. Yan, Y. Zhang
Date :  06 May 15  (Deposition) - 04 Nov 15  (Release) - 09 Dec 15  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.11
Chains :  Asym./Biol. Unit :  A,B
Keywords :  Fumitremorgen B, Ftmox1, Substrate, Oxidoreductase, Oxidoreductase- Oxidoreductase Inhibitor Complex (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  W. Yan, H. Song, F. Song, Y. Guo, C. H. Wu, A. Sae Her, Y. Pu, S. Wang, N. Naowarojna, A. Weitz, M. P. Hendrich, C. E. Costello, L. Zhang, P. Liu, Y. Jessie Zhang
Endoperoxide Formation By An Alpha-Ketoglutarate-Dependent Mononuclear Non-Haem Iron Enzyme.
Nature V. 527 539 2015
PubMed-ID: 26524521  |  Reference-DOI: 10.1038/NATURE15519

(-) Compounds

Molecule 1 - VERRUCULOGEN SYNTHASE
    Chains: A, B
    EC Number: 1.14.11.38
    Engineered: YES
    Expression System: ESCHERICHIA COLI 'BL21-GOLD(DE3)PLYSS AG'
    Expression System Taxid: 866768
    Gene: FTMOX1, FTMF, AFUA_8G00230
    Organism Scientific: NEOSARTORYA FUMIGATA (STRAIN ATCC MYA-4609 / AF293 / CBS 101355 / FGSC A1100)
    Organism Taxid: 330879
    Strain: ATCC MYA-4609 / AF293 / CBS 101355 / FGSC A1100
    Synonym: FUMITREMORGIN BIOSYNTHESIS PROTEIN F

 Structural Features

(-) Chains, Units

  12
Asymmetric/Biological Unit : AB

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (3, 4)

Asymmetric/Biological Unit (3, 4)
No.NameCountTypeFull Name
14Q11Ligand/IonFUMITREMORGEN B
2CO1Ligand/IonCOBALT (II) ION
3FE22Ligand/IonFE (II) ION

(-) Sites  (4, 4)

Asymmetric Unit (4, 4)
No.NameEvidenceResiduesDescription
1AC1SOFTWARELEU A:64 , SER A:112 , ALA A:113 , PHE A:115 , HIS A:129 , ARG A:130 , ASP A:131 , ALA A:133 , THR A:134 , HIS A:135 , MET A:138 , SER A:149 , TYR A:224 , ASN A:226 , PHE A:233 , HOH A:628 , PRO B:265 , ASN B:266 , ILE B:267binding site for residue 4Q1 A 401
2AC2SOFTWAREHIS A:129 , ASP A:131 , HIS A:205 , HOH A:607 , HOH A:622 , HOH A:628binding site for residue FE2 A 402
3AC3SOFTWAREGLU A:182 , ASP A:184 , HOH A:524 , HOH A:546binding site for residue CO A 403
4AC4SOFTWAREHIS B:129 , ASP B:131 , HIS B:205 , HOH B:619 , HOH B:742 , HOH B:751binding site for residue FE2 B 501

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4ZON)

(-) Cis Peptide Bonds  (2, 2)

Asymmetric/Biological Unit
No.Residues
1Asp A:264 -Pro A:265
2Asp B:264 -Pro B:265

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4ZON)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4ZON)

(-) Exons   (0, 0)

(no "Exon" information available for 4ZON)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:285
                                                                                                                                                                                                                                                                                                                             
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....eee...hhhhhhhhhhhh.eeeee...hhhhhhhhhhhhhhhhh.........hhhhh....eee.hhhhhhhhhhhh...hhhhhhhhhhhh.....eeeeeeeeeee...............hhhhhhh.......eeeeeee...........ee..hhhhh......hhhhhee.......eeeee....ee...........eeeeeeeeee............hhhhhhh.hhhhhhhh................ee..eehhhhh........ Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4zon A   6 KPQLQRLAADADVDRMCRLLEEDGAFILKGLLPFDVVESFNRELDVQMAIPPPKGERLLADKYPPHFKYVPNVATTCPTFRNTVLINPVIHAICEAYFQRTGDYWLSAAFLREIESGMPAQPFHRDDATHPLMHYQPLEAPPVSLSVIFPLTEFTEENGATEVILGSHRWTEVGTPERDQAVLATMDPGDVLIVRQRVVHAGGGNRTTAGKPRRVVLAYFNSVQLTPFETYRTMPREMVESMTVLGQRMLGWRTMKPSDPNIVGINLIDDKRLENVLQLKAADSP 290
                                    15        25        35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215       225       235       245       255       265       275       285     


Chain B from PDB  Type:PROTEIN  Length:289
                                                                                                                                                                                                                                                                                                                                 
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .......ee....hhhhhhhhhhhh.eeee....hhhhhhhhhhhhhhhhhh........hhhhh.....ee.hhhhhhhhhhhh...hhhhhhhhhhhh.....eeeeeeeeeee...............hhhhhhh.......eeeeeee...........ee..hhhhh......hhhhhee.......eeeee....ee...........eeeeeeeeee............hhhhhhh.hhhhhhhh................ee..eehhhhh.......... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4zon B   4 DSKPQLQRLAADADVDRMCRLLEEDGAFILKGLLPFDVVESFNRELDVQMAIPPPKGERLLADKYPPHFKYVPNVATTCPTFRNTVLINPVIHAICEAYFQRTGDYWLSAAFLREIESGMPAQPFHRDDATHPLMHYQPLEAPPVSLSVIFPLTEFTEENGATEVILGSHRWTEVGTPERDQAVLATMDPGDVLIVRQRVVHAGGGNRTTAGKPRRVVLAYFNSVQLTPFETYRTMPREMVESMTVLGQRMLGWRTMKPSDPNIVGINLIDDKRLENVLQLKAADSPAL 292
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253       263       273       283
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4ZON)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4ZON)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4ZON)

(-) Gene Ontology  (5, 5)

Asymmetric/Biological Unit(hide GO term definitions)

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        FTMF_ASPFU | Q4WAW9: 4y5s 4y5t

(-) Related Entries Specified in the PDB File

4y5s
4y5t 4Y5T IS THE APO FORM OF FTMOX1