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(-) Description

Title :  SACCHAROMYCES CEREVISIAE CYP51 (LANOSTEROL 14-ALPHA DEMETHYLASE) Y140F MUTANT COMPLEXED WITH ITRACONAZOLE
 
Authors :  A. Sagatova, M. V. Keniya, R. K. Wilson, J. D. A. Tyndall, B. C. Monk
Date :  20 Apr 15  (Deposition) - 30 Mar 16  (Release) - 21 Dec 16  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.02
Chains :  Asym./Biol. Unit :  A
Keywords :  Itraconazole, Cyp51, Oxidoreductase-Oxidoreducatse Inhibitor Complex, Resistance Mutation, Oxidoreductase-Oxidoreductase Inhibitor Complex (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  A. A. Sagatova, M. V. Keniya, R. K. Wilson, M. Sabherwal, J. D. Tyndall, B. C. Monk
Triazole Resistance Mediated By Mutations Of A Conserved Active Site Tyrosine In Fungal Lanosterol 14 Alpha-Demethylase.
Sci Rep V. 6 26213 2016
PubMed-ID: 27188873  |  Reference-DOI: 10.1038/SREP26213
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - LANOSTEROL 14-ALPHA DEMETHYLASE
    Chains: A
    Engineered: YES
    Expression System: SACCHAROMYCES CEREVISIAE
    Expression System Strain: AD2DELTA
    Expression System Taxid: 4932
    Gene: ERG11, SCY_2394
    Mutation: YES
    Organism Common: BAKER'S YEAST
    Organism Scientific: SACCHAROMYCES CEREVISIAE (STRAIN YJM789)
    Organism Taxid: 307796
    Strain: YJM789

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 2)

Asymmetric/Biological Unit (2, 2)
No.NameCountTypeFull Name
11YN1Ligand/Ion2-[(2R)-BUTAN-2-YL]-4-{4-[4-(4-{[(2R,4S)-2-(2,4-DICHLOROPHENYL)-2-(1H-1,2,4-TRIAZOL-1-YLMETHYL)-1,3-DIOXOLAN-4-YL]METHOXY}PHENYL)PIPERAZIN-1-YL]PHENYL}-2,4-DIHYDRO-3H-1,2,4-TRIAZOL-3-ONE
2HEM1Ligand/IonPROTOPORPHYRIN IX CONTAINING FE

(-) Sites  (2, 2)

Asymmetric Unit (2, 2)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREPHE A:113 , TYR A:126 , PHE A:140 , LEU A:147 , LYS A:151 , GLY A:315 , THR A:318 , PRO A:379 , LEU A:383 , ARG A:385 , PRO A:462 , PHE A:463 , GLY A:464 , HIS A:468 , CYS A:470 , ILE A:471 , GLY A:472 , 1YN A:602 , HOH A:826 , HOH A:865binding site for residue HEM A 601
2AC2SOFTWAREALA A:69 , TYR A:72 , GLY A:73 , TYR A:126 , PHE A:134 , ILE A:139 , PHE A:140 , PHE A:236 , PRO A:238 , GLY A:310 , VAL A:311 , GLY A:314 , THR A:318 , LEU A:380 , SER A:382 , PHE A:384 , THR A:507 , SER A:508 , MET A:509 , HEM A:601 , HOH A:930binding site for residue 1YN A 602

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4ZDY)

(-) Cis Peptide Bonds  (1, 1)

Asymmetric/Biological Unit
No.Residues
1Gly A:515 -Pro A:516

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4ZDY)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4ZDY)

(-) Exons   (0, 0)

(no "Exon" information available for 4ZDY)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:527
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhh.................hhhhhhhhhhhhhhhhhhhhh.eeeeee..eeeeee.hhhhhhhhhh.....eehhhhhhhhhhhhhh.......hhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhh.........eeeeehhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhhhhh......hhhhhhhhh.........hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhh.hhhhhhhhhhhhhhh.....eeeee...ee......ee....eeeehhhhhh............hhhhhh...........eee....eee...........hhhhh..hhhhhhhhhhhhhhhhhhheeee.......................eeeeee........... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4zdy A   8 VGEALEYVNIGLSHFLALPLAQRISLIIIIPFIYNIVWQLLYSLRKDRPPLVFYWIPWVGSAVVYGMKPYEFFEECQKKYGDIFSFVLLGRVMTVYLGPKGHEFVFNAKLADVSAEAAYAHLTTPVFGKGVIFDCPNSRLMEQKKFVKGALTKEAFKSYVPLIAEEVYKYFRDSKNFRLNERTTGTIDVMVTQPEMTIFTASRSLLGKEMRAKLDTDFAYLYSDLDKGFTPINFVFPNLPLEHYRKRDHAQKAISGTYMSLIKERRKNNDIQDRDLIDSLMKNSTYKDGVKMTDQEIANLLIGVLMGGQHTSAATSAWILLHLAERPDVQQELYEEQMRVLDGGKKELTYDLLQEMPLLNQTIKETLRMHHPLHSLFRKVMKDMHVPNTSYVIPAGYHVLVSPGYTHLRDEYFPNAHQFNIHRWNNDSASSYSVGEEVDYGFGAISKGVSSPYLPFGGGRHRCIGEHFAYCQLGVLMSIFIRTLKWHYPEGKTVPPPDFTSMVTLPTGPAKIIWEKRNPEQKIGGRH 534
                                    17        27        37        47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437       447       457       467       477       487       497       507       517       527
   Legend:   → Mismatch (orange background)
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4ZDY)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4ZDY)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4ZDY)

(-) Gene Ontology  (11, 11)

Asymmetric/Biological Unit(hide GO term definitions)

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  4zdy
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/TrEMBL
        A6ZSR0_YEAS7 | A6ZSR0: 4k0f 4wmz 4zdz 4ze0 4ze1 4ze2 4ze3 5eab 5eac 5ead 5eae 5eaf 5eag 5eah 5ese 5esf 5esg 5esh 5esi 5esj 5esk 5esl 5esm 5esn 5hs1 5ul0

(-) Related Entries Specified in the PDB File

4zdz 4K0F CONTAINS THE WILD TYPE PROTEIN WITH THE SAME LIGAND (ITRACONAZOLE) WITHOUT A MUTATION. 4LXJ CONTAINS THE WILD TYPE PROTEIN COMPLEXED WITH LANOSTEROL WITHOUT A MUTATION. 4WMZ CONTAINS THE WILD TYPE PROTEIN WITH FLUCONAZOLE WITHOUT A MUTATION
4ze0
4ze1
4ze2
4ze3