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(-) Description

Title :  SACCHAROMYCES CEREVISIAE CYP51 COMPLEXED WITH THE PLANT PATHOGEN INHIBITOR R-DESTHIO-PROTHIOCONAZOLE
 
Authors :  J. D. A. Tyndall, M. Sabherwal, A. A. Sagatova, M. V. Keniya, R. K. Wilson M. V. Woods, B. C. Monk
Date :  16 Oct 15  (Deposition) - 10 Feb 16  (Release) - 01 Feb 17  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.11
Chains :  Asym./Biol. Unit :  A
Keywords :  Cyp51, R-Desthio-Prothioconazole, Oxidoreductase-Oxidoreductase Inhibitor Complex, Oxidoreductase-Oxidoreducatse Inhibitor Complex (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  J. D. Tyndall, M. Sabherwal, A. A. Sagatova, M. V. Keniya, J. Negroni, R. K. Wilson, M. A. Woods, K. Tietjen, B. C. Monk
Structural And Functional Elucidation Of Yeast Lanosterol 1 Alpha-Demethylase In Complex With Agrochemical Antifungals.
Plos One V. 11 67485 2016
PubMed-ID: 27907120  |  Reference-DOI: 10.1371/JOURNAL.PONE.0167485
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - LANOSTEROL 14-ALPHA DEMETHYLASE
    Chains: A
    Engineered: YES
    Expression System: SACCHAROMYCES CEREVISIAE
    Expression System Taxid: 4932
    Gene: ERG11, SCY_2394
    Organism Common: BAKER'S YEAST
    Organism Scientific: SACCHAROMYCES CEREVISIAE
    Organism Taxid: 307796
    Other Details: RDP IS THE SMALL MOLECULE R-DESTHIO-PROTHIOCONAZOLE
    Strain: YJM789

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 2)

Asymmetric/Biological Unit (2, 2)
No.NameCountTypeFull Name
15L81Ligand/Ion(2~{R})-2-(1-CHLORANYLCYCLOPROPYL)-1-(2-CHLOROPHENYL)-3-(1,2,4-TRIAZOL-1-YL)PROPAN-2-OL
2HEM1Ligand/IonPROTOPORPHYRIN IX CONTAINING FE

(-) Sites  (2, 2)

Asymmetric Unit (2, 2)
No.NameEvidenceResiduesDescription
1AC1SOFTWARETYR A:126 , PHE A:134 , PHE A:236 , GLY A:310 , GLY A:314 , LEU A:383 , HEM A:602 , HOH A:743binding site for residue 5L8 A 601
2AC2SOFTWAREPHE A:113 , TYR A:140 , LEU A:147 , LYS A:151 , GLY A:315 , THR A:318 , PRO A:379 , ARG A:385 , PRO A:462 , PHE A:463 , GLY A:464 , HIS A:468 , CYS A:470 , GLY A:472 , ALA A:476 , 5L8 A:601 , HOH A:743 , HOH A:769binding site for residue HEM A 602

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 5EAE)

(-) Cis Peptide Bonds  (1, 1)

Asymmetric/Biological Unit
No.Residues
1Gly A:515 -Pro A:516

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 5EAE)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 5EAE)

(-) Exons   (0, 0)

(no "Exon" information available for 5EAE)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:529
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhh.................hhhhhhhhhhhhhhhhhhhhh.eeeeee..eeeeee.hhhhhhhhhh.....eehhhhhhhhhhhhhh.......hhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhh.........eeeeehhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhhhhh......hhhhhhhhh.........hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.......hhhhhh.hhhhhhhhhhhhhhh.....eeeee...ee......ee....eeeehhhhhh............hhhhhh...........eee....eee...........hhhhh..hhhhhhhhhhhhhhhhhhheeee.......................eeeeee............ Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5eae A   7 IVGEALEYVNIGLSHFLALPLAQRISLIIIIPFIYNIVWQLLYSLRKDRPPLVFYWIPWVGSAVVYGMKPYEFFEECQKKYGDIFSFVLLGRVMTVYLGPKGHEFVFNAKLADVSAEAAYAHLTTPVFGKGVIYDCPNSRLMEQKKFVKGALTKEAFKSYVPLIAEEVYKYFRDSKNFRLNERTTGTIDVMVTQPEMTIFTASRSLLGKEMRAKLDTDFAYLYSDLDKGFTPINFVFPNLPLEHYRKRDHAQKAISGTYMSLIKERRKNNDIQDRDLIDSLMKNSTYKDGVKMTDQEIANLLIGVLMGGQHTSAATSAWILLHLAERPDVQQELYEEQMRVLDGGKKELTYDLLQEMPLLNQTIKETLRMHHPLHSLFRKVMKDMHVPNTSYVIPAGYHVLVSPGYTHLRDEYFPNAHQFNIHRWNNDSASSYSVGEEVDYGFGAISKGVSSPYLPFGGGRHRCIGEHFAYCQLGVLMSIFIRTLKWHYPEGKTVPPPDFTSMVTLPTGPAKIIWEKRNPEQKIGGRHH 535
                                    16        26        36        46        56        66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216       226       236       246       256       266       276       286       296       306       316       326       336       346       356       366       376       386       396       406       416       426       436       446       456       466       476       486       496       506       516       526
   Legend:   → Mismatch (orange background)
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  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 5EAE)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 5EAE)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 5EAE)

(-) Gene Ontology  (11, 11)

Asymmetric/Biological Unit(hide GO term definitions)

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  5eae
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/TrEMBL
        A6ZSR0_YEAS7 | A6ZSR0: 4k0f 4wmz 4zdy 4zdz 4ze0 4ze1 4ze2 4ze3 5eab 5eac 5ead 5eaf 5eag 5eah 5ese 5esf 5esg 5esh 5esi 5esj 5esk 5esl 5esm 5esn 5hs1 5ul0

(-) Related Entries Specified in the PDB File

4wmz 4WMZ IS A COMPLEX OF THE SAME PROTEIN COMPLEXED WITH FLUCONAZOLE
5eab
5eac
5ead
5eaf
5eag
5eah