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(-) Description

Title :  SH3-II OF DROSOPHILA RIM-BINDING PROTEIN WITH APLIP1 PEPTIDE
 
Authors :  J. H. Driller, N. Holton, M. Siebert, M. A. Boehme, M. C. Wahl, S. J. Sigri
Date :  08 Apr 15  (Deposition) - 05 Aug 15  (Release) - 26 Aug 15  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.09
Chains :  Asym. Unit :  A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X
Biol. Unit 1:  A,M  (1x)
Biol. Unit 2:  B,N  (1x)
Biol. Unit 3:  C,O  (1x)
Biol. Unit 4:  D,P  (1x)
Biol. Unit 5:  E,Q  (1x)
Biol. Unit 6:  F,R  (1x)
Biol. Unit 7:  G,S  (1x)
Biol. Unit 8:  H,T  (1x)
Biol. Unit 9:  I,U  (1x)
Biol. Unit 10:  J,V  (1x)
Biol. Unit 11:  K,W  (1x)
Biol. Unit 12:  L,X  (1x)
Keywords :  Synapse, Active Zone, Rim-Binding Protein, Sh3 Domain, Aplip1 (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  M. Siebert, M. A. Bohme, J. H. Driller, H. Babikir, M. M. Mampell, U. Rey N. Ramesh, T. Matkovic, N. Holton, S. Reddy-Alla, F. Gottfert, D. Kamin, C. Quentin, S. Klinedinst, T. F. Andlauer, S. W. Hell, C. A. Collins, M. C. Wahl, B. Loll, S. J. Sigrist
A High Affinity Rim-Binding Protein/Aplip1 Interaction Prevents The Formation Of Ectopic Axonal Active Zones.
Elife V. 4 2015
PubMed-ID: 26274777  |  Reference-DOI: 10.7554/ELIFE.06935

(-) Compounds

Molecule 1 - RIM-BINDING PROTEIN, ISOFORM F
    Chains: A, B, C, D, E, F, G, H, I, J, K, L
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PGEX6P1
    Expression System Taxid: 562
    Expression System Vector Type: PLASMID
    Fragment: UNP RESIDUES 1318-1382
    Gene: RBP, DMEL_CG43073
    Organism Common: FRUIT FLY
    Organism Scientific: DROSOPHILA MELANOGASTER
    Organism Taxid: 7227
 
Molecule 2 - JNK-INTERACTING PROTEIN 1
    Chains: M, N, O, P, Q, R, S, T, U, V, W, X
    Engineered: YES
    Fragment: UNP RESIDUES 149-163
    Organism Common: FRUIT FLY
    Organism Scientific: DROSOPHILA MELANOGASTER
    Organism Taxid: 7227
    Other Details: N-TERMINAL ACETYLATION, C-TERMINAL AMIDATION
    Synonym: JIP-1,APP-LIKE-INTERACTING PROTEIN 1,APLIP1,PROTEIN EYE DEVELOPMENTAL SP512
    Synthetic: YES

 Structural Features

(-) Chains, Units

  123456789101112131415161718192021222324
Asymmetric Unit : ABCDEFGHIJKLMNOPQRSTUVWX
Biological Unit 1 (1x): A           M           
Biological Unit 2 (1x):  B           N          
Biological Unit 3 (1x):   C           O         
Biological Unit 4 (1x):    D           P        
Biological Unit 5 (1x):     E           Q       
Biological Unit 6 (1x):      F           R      
Biological Unit 7 (1x):       G           S     
Biological Unit 8 (1x):        H           T    
Biological Unit 9 (1x):         I           U   
Biological Unit 10 (1x):          J           V  
Biological Unit 11 (1x):           K           W 
Biological Unit 12 (1x):            L           X

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 17)

Asymmetric Unit (2, 17)
No.NameCountTypeFull Name
1NH26Mod. Amino AcidAMINO GROUP
2PO411Ligand/IonPHOSPHATE ION
Biological Unit 1 (2, 2)
No.NameCountTypeFull Name
1NH21Mod. Amino AcidAMINO GROUP
2PO41Ligand/IonPHOSPHATE ION
Biological Unit 2 (1, 1)
No.NameCountTypeFull Name
1NH2-1Mod. Amino AcidAMINO GROUP
2PO41Ligand/IonPHOSPHATE ION
Biological Unit 3 (2, 2)
No.NameCountTypeFull Name
1NH21Mod. Amino AcidAMINO GROUP
2PO41Ligand/IonPHOSPHATE ION
Biological Unit 4 (0, 0)
No.NameCountTypeFull Name
1NH2-1Mod. Amino AcidAMINO GROUP
2PO4-1Ligand/IonPHOSPHATE ION
Biological Unit 5 (2, 2)
No.NameCountTypeFull Name
1NH21Mod. Amino AcidAMINO GROUP
2PO41Ligand/IonPHOSPHATE ION
Biological Unit 6 (1, 1)
No.NameCountTypeFull Name
1NH2-1Mod. Amino AcidAMINO GROUP
2PO41Ligand/IonPHOSPHATE ION
Biological Unit 7 (2, 2)
No.NameCountTypeFull Name
1NH21Mod. Amino AcidAMINO GROUP
2PO41Ligand/IonPHOSPHATE ION
Biological Unit 8 (1, 1)
No.NameCountTypeFull Name
1NH2-1Mod. Amino AcidAMINO GROUP
2PO41Ligand/IonPHOSPHATE ION
Biological Unit 9 (2, 2)
No.NameCountTypeFull Name
1NH21Mod. Amino AcidAMINO GROUP
2PO41Ligand/IonPHOSPHATE ION
Biological Unit 10 (1, 1)
No.NameCountTypeFull Name
1NH2-1Mod. Amino AcidAMINO GROUP
2PO41Ligand/IonPHOSPHATE ION
Biological Unit 11 (2, 2)
No.NameCountTypeFull Name
1NH21Mod. Amino AcidAMINO GROUP
2PO41Ligand/IonPHOSPHATE ION
Biological Unit 12 (1, 1)
No.NameCountTypeFull Name
1NH2-1Mod. Amino AcidAMINO GROUP
2PO41Ligand/IonPHOSPHATE ION

(-) Sites  (17, 17)

Asymmetric Unit (17, 17)
No.NameEvidenceResiduesDescription
01AC1SOFTWARELYS A:1356 , TYR A:1362binding site for residue PO4 A 1401
02AC2SOFTWAREARG B:1318 , ASP B:1355 , LYS B:1356 , TYR B:1362binding site for residue PO4 B 1401
03AC3SOFTWAREARG C:1318 , ASP C:1355 , LYS C:1356 , TYR C:1362binding site for residue PO4 C 1401
04AC4SOFTWAREASP E:1355 , LYS E:1356 , TYR E:1362binding site for residue PO4 E 1401
05AC5SOFTWAREARG F:1318 , ASP F:1355 , LYS F:1356 , TYR F:1362 , HOH F:1502binding site for residue PO4 F 1401
06AC6SOFTWAREARG G:1318 , ASP G:1355 , LYS G:1356binding site for residue PO4 G 1401
07AC7SOFTWAREARG H:1318 , LYS H:1356 , TYR H:1362 , GLU H:1380binding site for residue PO4 H 1401
08AC8SOFTWAREARG I:1318 , ASP I:1355 , LYS I:1356 , TYR I:1362binding site for residue PO4 I 1401
09AC9SOFTWAREARG J:1318 , ASP J:1355 , LYS J:1356 , TYR J:1362binding site for residue PO4 J 1401
10AD1SOFTWAREARG K:1318 , LYS K:1356 , TYR K:1362binding site for residue PO4 K 1401
11AD2SOFTWAREARG L:1318 , ASP L:1355 , LYS L:1356 , TYR L:1362binding site for residue PO4 L 1401
12AD3SOFTWARESER F:1314 , TRP L:1363 , PRO M:159 , LYS M:160 , ASN M:161 , LYS M:162binding site for Di-peptide LYS M 163 and NH2 M 164
13AD4SOFTWARESER D:1314 , PRO D:1315 , GLU D:1316 , TRP J:1363 , ARG J:1370 , PRO O:159 , LYS O:160 , ASN O:161 , LYS O:162binding site for Di-peptide LYS O 163 and NH2 O 164
14AD5SOFTWARETRP H:1363 , ARG H:1370 , ILE Q:158 , PRO Q:159 , LYS Q:160 , ASN Q:161 , LYS Q:162binding site for Di-peptide LYS Q 163 and NH2 Q 164
15AD6SOFTWARETRP F:1363 , PRO S:159 , LYS S:160 , ASN S:161 , LYS S:162binding site for Di-peptide LYS S 163 and NH2 S 164
16AD7SOFTWARETRP D:1363 , ARG D:1370 , SER J:1314 , GLU J:1316 , ILE U:158 , PRO U:159 , LYS U:160 , ASN U:161 , LYS U:162binding site for Di-peptide LYS U 163 and NH2 U 164
17AD8SOFTWARETRP B:1363 , ARG B:1370 , GLY H:1313 , SER H:1314 , GLU H:1316 , ILE W:158 , PRO W:159 , LYS W:160 , ASN W:161 , LYS W:162binding site for Di-peptide LYS W 163 and NH2 W 164

(-) SS Bonds  (6, 6)

Asymmetric Unit
No.Residues
1A:1338 -B:1338
2C:1338 -D:1338
3E:1338 -F:1338
4G:1338 -H:1338
5I:1338 -J:1338
6K:1338 -L:1338

(-) Cis Peptide Bonds  (1, 1)

Asymmetric Unit
No.Residues
1Arg P:152 -Arg P:153

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4Z88)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4Z88)

(-) Exons   (0, 0)

(no "Exon" information available for 4Z88)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:65
                                                                                                  
               SCOP domains ----------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeee....hhhhhh...hhhhhh.......eeeee.......eeeeee..eeeeee...eee.. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------- Transcript
                4z88 A 1318 RYFVAMFDYDPSTMSPNPDGCDEELPFQEGDTIKVFGDKDADGFYWGELRGRRGYVPHNMVSEVE 1382
                                  1327      1337      1347      1357      1367      1377     


Chain B from PDB  Type:PROTEIN  Length:66
                                                                                                   
               SCOP domains ------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------ Pfam domains
         Sec.struct. author .eeeee....hhhhhh...hhhhhh.......eeeee.......eeeeee..eeeeee...ee... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------ Transcript
                4z88 B 1317 FRYFVAMFDYDPSTMSPNPDGCDEELPFQEGDTIKVFGDKDADGFYWGELRGRRGYVPHNMVSEVE 1382
                                  1326      1336      1346      1356      1366      1376      


Chain C from PDB  Type:PROTEIN  Length:65
                                                                                                  
               SCOP domains ----------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeee....hhhhhh...hhhhhh.......eeeee.......eeeeee..eeeeee...eee. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------- Transcript
                4z88 C 1317 FRYFVAMFDYDPSTMSPNPDGCDEELPFQEGDTIKVFGDKDADGFYWGELRGRRGYVPHNMVSEV 1381
                                  1326      1336      1346      1356      1366      1376     


Chain D from PDB  Type:PROTEIN  Length:70
                                                                                                       
               SCOP domains ---------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....eeeee....hhhhhh...hhhhhh.......eeeee.......eeeeee..eeeeee...eee.. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------- Transcript
                4z88 D 1313 GSPEFRYFVAMFDYDPSTMSPNPDGCDEELPFQEGDTIKVFGDKDADGFYWGELRGRRGYVPHNMVSEVE 1382
                                  1322      1332      1342      1352      1362      1372      1382


Chain E from PDB  Type:PROTEIN  Length:63
                                                                                                
               SCOP domains --------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------- Pfam domains
         Sec.struct. author .eee....hhhhhh...hhhhhh.......eeeee.......eeeeee..eeeeee...eee. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------- Transcript
                4z88 E 1319 YFVAMFDYDPSTMSPNPDGCDEELPFQEGDTIKVFGDKDADGFYWGELRGRRGYVPHNMVSEV 1381
                                  1328      1338      1348      1358      1368      1378   


Chain F from PDB  Type:PROTEIN  Length:67
                                                                                                    
               SCOP domains ------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....eeeee....hhhhhh...hhhhhh.......eeeee.......eeeeee..eeeeee...ee. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------- Transcript
                4z88 F 1314 SPEFRYFVAMFDYDPSTMSPNPDGCDEELPFQEGDTIKVFGDKDADGFYWGELRGRRGYVPHNMVSE 1380
                                  1323      1333      1343      1353      1363      1373       


Chain G from PDB  Type:PROTEIN  Length:67
                                                                                                    
               SCOP domains ------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeeee....hhhhhh...hhhhhh.......eeeee.......eeeeee..eeeeee...eee. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------- Transcript
                4z88 G 1315 PEFRYFVAMFDYDPSTMSPNPDGCDEELPFQEGDTIKVFGDKDADGFYWGELRGRRGYVPHNMVSEV 1381
                                  1324      1334      1344      1354      1364      1374       


Chain H from PDB  Type:PROTEIN  Length:70
                                                                                                       
               SCOP domains ---------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....eeeee....hhhhhh...hhhhhh.......eeeee.......eeeeee..eeeeee...eee.. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------- Transcript
                4z88 H 1313 GSPEFRYFVAMFDYDPSTMSPNPDGCDEELPFQEGDTIKVFGDKDADGFYWGELRGRRGYVPHNMVSEVE 1382
                                  1322      1332      1342      1352      1362      1372      1382


Chain I from PDB  Type:PROTEIN  Length:66
                                                                                                   
               SCOP domains ------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------ Pfam domains
         Sec.struct. author .eeeee....hhhhhh...hhhhhh.......eeeee.......eeeeee..eeeeee...eee.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------ Transcript
                4z88 I 1317 FRYFVAMFDYDPSTMSPNPDGCDEELPFQEGDTIKVFGDKDADGFYWGELRGRRGYVPHNMVSEVE 1382
                                  1326      1336      1346      1356      1366      1376      


Chain J from PDB  Type:PROTEIN  Length:68
                                                                                                     
               SCOP domains -------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....eeeee....hhhhhh...hhhhhh.......eeeee.......eeeeee..eeeeee...eee. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------- Transcript
                4z88 J 1314 SPEFRYFVAMFDYDPSTMSPNPDGCDEELPFQEGDTIKVFGDKDADGFYWGELRGRRGYVPHNMVSEV 1381
                                  1323      1333      1343      1353      1363      1373        


Chain K from PDB  Type:PROTEIN  Length:66
                                                                                                   
               SCOP domains ------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------ Pfam domains
         Sec.struct. author ..eeeee....hhhhhh...hhhhhh.......eeeee.......eeeeee..eeeeee...eee. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------ Transcript
                4z88 K 1316 EFRYFVAMFDYDPSTMSPNPDGCDEELPFQEGDTIKVFGDKDADGFYWGELRGRRGYVPHNMVSEV 1381
                                  1325      1335      1345      1355      1365      1375      


Chain L from PDB  Type:PROTEIN  Length:68
                                                                                                     
               SCOP domains -------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....eeeee....hhhhhh...hhhhhh.......eeeee.......eeeeee..eeeeee...eee. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------- Transcript
                4z88 L 1314 SPEFRYFVAMFDYDPSTMSPNPDGCDEELPFQEGDTIKVFGDKDADGFYWGELRGRRGYVPHNMVSEV 1381
                                  1323      1333      1343      1353      1363      1373        


Chain M from PDB  Type:PROTEIN  Length:12
                                             
               SCOP domains ------------ SCOP domains
               CATH domains ------------ CATH domains
               Pfam domains ------------ Pfam domains
         Sec.struct. author ............ Sec.struct. author
                 SAPs(SNPs) ------------ SAPs(SNPs)
                    PROSITE ------------ PROSITE
                 Transcript ------------ Transcript
                4z88 M  153 RKLPEIPKNKKx  164
                                   162 |
                                     164-NH2


Chain N from PDB  Type:PROTEIN  Length:5
                                      
               SCOP domains ----- SCOP domains
               CATH domains ----- CATH domains
               Pfam domains ----- Pfam domains
         Sec.struct. author ..... Sec.struct. author
                 SAPs(SNPs) ----- SAPs(SNPs)
                    PROSITE ----- PROSITE
                 Transcript ----- Transcript
                4z88 N  155 LPEIP  159


Chain O from PDB  Type:PROTEIN  Length:11
                                            
               SCOP domains ----------- SCOP domains
               CATH domains ----------- CATH domains
               Pfam domains ----------- Pfam domains
         Sec.struct. author .....hhhhh. Sec.struct. author
                 SAPs(SNPs) ----------- SAPs(SNPs)
                    PROSITE ----------- PROSITE
                 Transcript ----------- Transcript
                4z88 O  154 KLPEIPKNKKx  164
                                   163|
                                    164-NH2


Chain P from PDB  Type:PROTEIN  Length:8
                                         
               SCOP domains -------- SCOP domains
               CATH domains -------- CATH domains
               Pfam domains -------- Pfam domains
         Sec.struct. author ........ Sec.struct. author
                 SAPs(SNPs) -------- SAPs(SNPs)
                    PROSITE -------- PROSITE
                 Transcript -------- Transcript
                4z88 P  152 RRKLPEIP  159


Chain Q from PDB  Type:PROTEIN  Length:14
                                               
               SCOP domains -------------- SCOP domains
               CATH domains -------------- CATH domains
               Pfam domains -------------- Pfam domains
         Sec.struct. author ........hhhhh. Sec.struct. author
                 SAPs(SNPs) -------------- SAPs(SNPs)
                    PROSITE -------------- PROSITE
                 Transcript -------------- Transcript
                4z88 Q  151 RRRKLPEIPKNKKx  164
                                   160   |
                                       164-NH2


Chain R from PDB  Type:PROTEIN  Length:7
                                        
               SCOP domains ------- SCOP domains
               CATH domains ------- CATH domains
               Pfam domains ------- Pfam domains
         Sec.struct. author ....... Sec.struct. author
                 SAPs(SNPs) ------- SAPs(SNPs)
                    PROSITE ------- PROSITE
                 Transcript ------- Transcript
                4z88 R  153 RKLPEIP  159


Chain S from PDB  Type:PROTEIN  Length:14
                                               
               SCOP domains -------------- SCOP domains
               CATH domains -------------- CATH domains
               Pfam domains -------------- Pfam domains
         Sec.struct. author .............. Sec.struct. author
                 SAPs(SNPs) -------------- SAPs(SNPs)
                    PROSITE -------------- PROSITE
                 Transcript -------------- Transcript
                4z88 S  151 RRRKLPEIPKNKKx  164
                                   160   |
                                       164-NH2


Chain T from PDB  Type:PROTEIN  Length:5
                                      
               SCOP domains ----- SCOP domains
               CATH domains ----- CATH domains
               Pfam domains ----- Pfam domains
         Sec.struct. author ..... Sec.struct. author
                 SAPs(SNPs) ----- SAPs(SNPs)
                    PROSITE ----- PROSITE
                 Transcript ----- Transcript
                4z88 T  152 RRKLP  156


Chain U from PDB  Type:PROTEIN  Length:13
                                              
               SCOP domains ------------- SCOP domains
               CATH domains ------------- CATH domains
               Pfam domains ------------- Pfam domains
         Sec.struct. author ............. Sec.struct. author
                 SAPs(SNPs) ------------- SAPs(SNPs)
                    PROSITE ------------- PROSITE
                 Transcript ------------- Transcript
                4z88 U  152 RRKLPEIPKNKKx  164
                                   161  |
                                      164-NH2


Chain V from PDB  Type:PROTEIN  Length:7
                                        
               SCOP domains ------- SCOP domains
               CATH domains ------- CATH domains
               Pfam domains ------- Pfam domains
         Sec.struct. author ....... Sec.struct. author
                 SAPs(SNPs) ------- SAPs(SNPs)
                    PROSITE ------- PROSITE
                 Transcript ------- Transcript
                4z88 V  152 RRKLPEI  158


Chain W from PDB  Type:PROTEIN  Length:13
                                              
               SCOP domains ------------- SCOP domains
               CATH domains ------------- CATH domains
               Pfam domains ------------- Pfam domains
         Sec.struct. author .......hhhhh. Sec.struct. author
                 SAPs(SNPs) ------------- SAPs(SNPs)
                    PROSITE ------------- PROSITE
                 Transcript ------------- Transcript
                4z88 W  152 RRKLPEIPKNKKx  164
                                   161  |
                                      164-NH2


Chain X from PDB  Type:PROTEIN  Length:7
                                        
               SCOP domains ------- SCOP domains
               CATH domains ------- CATH domains
               Pfam domains ------- Pfam domains
         Sec.struct. author ....... Sec.struct. author
                 SAPs(SNPs) ------- SAPs(SNPs)
                    PROSITE ------- PROSITE
                 Transcript ------- Transcript
                4z88 X  152 RRKLPEI  158
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4Z88)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4Z88)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4Z88)

(-) Gene Ontology  (18, 18)

Asymmetric Unit(hide GO term definitions)

 Visualization

(-) Interactive Views

Asymmetric Unit
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        A0A0B4JDC9_D | A0A0B4JDC9: 4z89 4z8a

(-) Related Entries Specified in the PDB File

2csq HUMAN NMR STRUCTURE OF SH3-II