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(-) Description

Title :  CRYSTAL STRUCTURE OF PVX_084705 WITH BOUND 1-TERT-BUTYL-3-(3-CHLOROPHENOXY)-1H-PYRAZOLO[3,4-D]PYRIMIDIN-4-AMINE INHIBITOR
 
Authors :  J. R. Walker, A. K. Wernimont, H. He, A. Seitova, P. Loppnau, L. D. Sibley S. Graslund, A. Hutchinson, C. Bountra, J. Weigelt, A. M. Edwards, C. H. Arrowsmith, R. Hui, M. El Bakkouri, Structural Genomics Cons (Sgc)
Date :  27 Nov 15  (Deposition) - 16 Dec 15  (Release) - 30 Dec 15  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.60
Chains :  Asym./Biol. Unit :  A
Keywords :  Structural Genomics, Structural Genomics Consortium, Sgc, Kinase, Transferase-Transferase Inhibitor Complex (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  J. R. Walker, A. K. Wernimont, H. He, A. Seitova, P. Loppnau, L. D. Sibley, S. Graslund, A. Hutchinson, C. Bountra, J. Weigelt, A. M. Edwards, C. H. Arrowsmith, R. Hui, M. El Bakkouri, Structural Genomics Consortium (Sgc)
Crystal Structure Of Pvx_084705 With Bound Inhibitor
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - CGMP-DEPENDENT PROTEIN KINASE, PUTATIVE
    Chains: A
    Engineered: YES
    Expression System: SPODOPTERA FRUGIPERDA
    Expression System Plasmid: PFBOH-MHL
    Expression System Strain: SF9
    Expression System Taxid: 7108
    Gene: PVX_084705
    Organism Scientific: PLASMODIUM VIVAX (STRAIN SALVADOR I)
    Organism Taxid: 126793
    Strain: SALVADOR I

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 1)

Asymmetric/Biological Unit (1, 1)
No.NameCountTypeFull Name
11FB1Ligand/Ion1-TERT-BUTYL-3-(3-CHLOROPHENOXY)-1H-PYRAZOLO[3,4-D]PYRIMIDIN-4-AMINE

(-) Sites  (1, 1)

Asymmetric Unit (1, 1)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREILE A:540 , ALA A:561 , LYS A:563 , ILE A:595 , PHE A:609 , THR A:611 , GLU A:612 , VAL A:614 , LEU A:664binding site for residue 1FB A 901

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 5F0A)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 5F0A)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 5F0A)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 5F0A)

(-) Exons   (0, 0)

(no "Exon" information available for 5F0A)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
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Chain A from PDB  Type:PROTEIN  Length:811
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..............hhhhhhhhee....hhhhhhhhhhhhhh.......hhhhhhhhhhhheeeee....eee.......eeeeeee..eeee....eeeee....ee.hhhhh.......eeee...eeeeeeehhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhh..eeeee....eee.......eeeeeee..eeeee..eeeeee....ee.hhhhh.......eeee...eeeeeeehhhhhhhh.hhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhheeeee....eeee.....eeeeeeee..eeeee..eeeeee....eehhhhhhh......eeeee...eeeeeeehhhhhhhhh..hhhhhhhhhhhhhhhh.hhhhhh.hhhhhhhhhhh.eeeee....eee.......eeeeeee.eeeeee..eeeeeee...eehhhhhh.......eeee....eeeeeeehhhhhhhhhhhhhhhhhhhhhhhhh..hhh.eeeeeeeee...eeeeeeee.....eeeeeeeehhhhhhh..hhhhhhhhhhhhhh.......eee......eeeeeee.....hhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhh.ee....hhh.eee.....eee......ee..........hhhhhhhhhhh.....hhhhhhhhhhhhhhhhh..........hhhhhhhhhhhh.........hhhhhhhhhhhh..hhhhh.......hhhhhhhhhhh..hhhhhhh................. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                5f0a A    0 GMRCNEKKKAIFSGEDTLMEDHLQLREKLSEDIEMIKASLKNNLVCSTLNDNEILTLSNYMQFFVFKGGDLVIKQGEKGSYFFIINSGKFDVYVNDKKVKSMGKGSSFGEAALIHNTQRSATIMAETDGTLWGVQRSTFRATLKQLSNRNFNENRSFIDSVSVFDMLTEAQKNMITNACVIQMFKPGETIVKQGDYGDVLFILKEGKATVFINDKEIRVLNKGSYFGERALLYDEPRSATIIAKEPTACASICRKLLNIVLGNLQVVLFRNIMTEALQQSEIFRQFSAEQLNDLADTAIVRDYPANYHILHKKVKSVKYLIVLEGKVELFLDDESIGILTRGKSFGDQYVLNQKQKFRHTVKSLDVCKIALITESCLADCLGDNNIDASIDHNNKKSIIKKMYIFRYLSEQQCNLLIEAFRTTRYEEGDYIIQEGEVGSRFYIIKNGEVEVTKNGKRLRTLGKNDYFGERALLYDEPRTASIISKATSVECWFVDKSVFLQIIQGPMLTHLEERIKMQDTKVEMHELETERIIGRGTFGTVKLVHHKPTQIRYALKCVSKRSIISLNQQNNIKLEREITAENDHPFIIRLVRTFKDSNCFYFLTELVTGGELYDAIRKLGLLSKPQAQFYLGSIILAIEYLHERNIVYRDLKPENILLDKQGYVKLIDFGCAKKIQGRAYTLVGTPHYMAPEVILGKGYGCTVDIWALGVCLYEFICGPLPFGNDQEDQLEIFRDILTGQLTFPDYVSDQDSINLMKRLLCRLPQGRIGCSINGFKDIKEHAFFGNFNWDKLAGRLLEPPLVSKGETYADF  846
                                 || 11  ||    26        36        46        56        66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216       226       236       246       256       266       276       286       296       306       316 ||    327       337       347       357       367       377       387       397       407       417       427       437       447       457       467       477       487       497       507       517       527       537       547       557       567       577       587       597       607       617       627       637       647       657       667       677       687       697       707       717       727       737       747       757       767       777       787       797       807       845 
                                 5|    14|                                                                                                                                                                                                                                                                                                       318|                                                                                                                                                                                                                             545A                                                                                                                                                                                                                                                                            816| 
                                  8     20                                                                                                                                                                                                                                                                                                        320                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              845
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 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 5F0A)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 5F0A)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 5F0A)

(-) Gene Ontology  (8, 8)

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        A5K0N4_PLAVS | A5K0N4: 5ezr
UniProtKB/TrEMBL
        A5K0N4_PLAVS | A5K0N4: 4rz7 5dyl 5dzc 5fet

(-) Related Entries Specified in the PDB File

4myi UNLIGANDED STRUCTURE