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(-) Description

Title :  CRYSTAL STRUCTURE OF PVX_084705 BOUND TO COMPOUND
 
Authors :  M. El Bakkouri, M. Amani, J. R. Walker, S. Osborne, J. M. Large, K. Birch N. Bouloc, E. Smiljanic-Hurley, M. Wheldon, D. J. Harding, A. T. Merri K. H. Ansell, P. J. Coombs, C. A. Kettleborough, B. L. Stewart, P. W. Bow W. E. Gutteridge, C. H. Arrowsmith, A. M. Edwards, C. Bountra, D. A. Bak P. Loppnau, Structural Genomics Consortium (Sgc)
Date :  26 Nov 15  (Deposition) - 10 May 17  (Release) - 10 May 17  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.50
Chains :  Asym./Biol. Unit :  A
Keywords :  Protein Kinase, Structural Genomics, Structural Genomics Consortium, Sgc, Transferase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  M. El Bakkouri, M. Amani, J. R. Walker, S. Osborne, J. M. Large, K. Birchall, N. Bouloc, E. Smiljanic-Hurley, M. Wheldon, D. J. Harding, A. T. Merritt, K. H. Ansell, P. J. Coombs, C. A. Kettleborough, B. L. Stewart, P. W. Bowyer, W. E. Gutteridge, C. H. Arrowsmith, A. M. Edwards, C. Bountra, D. A. Baker, R. Hui, P. Loppnau
Crystal Structure Of Pvx_084705 Bound To Compound
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - CGMP-DEPENDENT PROTEIN KINASE, PUTATIVE
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PFBOH-MHL
    Expression System Taxid: 562
    Expression System Vector Type: PLASMID
    Gene: PVX_084705
    Organism Scientific: PLASMODIUM VIVAX (STRAIN SALVADOR I)
    Organism Taxid: 126793
    Strain: SALVADOR I

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 2)

Asymmetric/Biological Unit (2, 2)
No.NameCountTypeFull Name
14ZS1Ligand/IonN-[5-(3-{2-[(CYCLOPROPYLMETHYL)AMINO]PYRIMIDIN-4-YL}-7-[(DIMETHYLAMINO)METHYL]-6-METHYLIMIDAZO[1,2-A]PYRIDIN-2-YL)-2-FLUOROPHENYL]METHANESULFONAMIDE
2CL1Ligand/IonCHLORIDE ION

(-) Sites  (2, 2)

Asymmetric Unit (2, 2)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREILE A:540 , VAL A:548 , LYS A:563 , THR A:586 , ILE A:595 , PHE A:609 , THR A:611 , GLU A:612 , LEU A:613 , VAL A:614 , GLU A:618 , GLU A:661 , LEU A:664 , ILE A:674 , ASP A:675 , PHE A:676binding site for residue 4ZS A 901
2AC2SOFTWAREGLY A:445 , SER A:446 , ARG A:447 , TYR A:449 , ARG A:485 , HOH A:1014binding site for residue CL A 902

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 5EZR)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 5EZR)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 5EZR)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 5EZR)

(-) Exons   (0, 0)

(no "Exon" information available for 5EZR)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:803
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ............hhhhhhhh.....hhhhhhhhhhhhh...hhhhhhhhhhhhhhhh.eee................eeeee....eeee....eeeee....ee.hhhhhh........ee.....eeeeehhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhh..eeeee....eee.......eeeeeee.eeeeee..eeeeeee...eehhhhh........eeee...eeeeeeehhhhhhhh.hhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhheeeee....eeee...eeeeeeee..eeeee..eeeeee....eehhhhhhh......eeeee...eeeeeeehhhhhhhhh..hhhhhhhhhhhhhhhh.hhhhhh.hhhhhhhhhhh.eeeee....eee.......eeeeeee.eeeeee..eeeeeee...eehhhhhh.......eeee....eeeeeeehhhhhhhhhhhhhhhhhhhhhhhhh..hhh.eeeeee.......eeeeeee.....eeeeeeeehhhhhhh.hhhhhhhhhhhhhhh.......eeeee....eeeeeee.....hhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhh.ee....hhh.eee.....eee......ee..........hhhhhhhhhhh......hhhhhhhhhhhhhhhh..........hhhhhhhhhhhh.........hhhhhhhhhhhh..hhhhh.......hhhhhhhhhhh..hhhhhhh.............. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5ezr A   2 RCNEKKKAIFGEDTLMEDHLQLREKLSEDIEMIKASLKNNLVCSTLNDNEILTLSNYMQFFVFKGGDLVIKQGEKGSYFFIINSGKFDVYVNDKKVKSMGKGSSFGEAALIHNTQRSATIMAETDGTLWGVQRSTFRATLKQLSNRNFNENRSFIDSVSVFDMLTEAQKNMITNACVIQMFKPGETIVKQGDYGDVLFILKEGKATVFINDKEIRVLNKGSYFGERALLYDEPRSATIIAKEPTACASICRKLLNIVLGNLQVVLFRNIMTEALQQSEIFRQFSAEQLNDLADTAIVRDYPANYHILHKKSVKYLIVLEGKVELFLDDESIGILTRGKSFGDQYVLNQKQKFRHTVKSLDVCKIALITESCLADCLGDNNIDASIDHNNKKSIIKKMYIFRYLSEQQCNLLIEAFRTTRYEEGDYIIQEGEVGSRFYIIKNGEVEVTKNGKRLRTLGKNDYFGERALLYDEPRTASIISKATSVECWFVDKSVFLQIIQGPMLTHLEERIKMQDTKVEMHELETERIIGRGTFGTVKLVHHKPTQIRYALKCVSKRSIISLNQQNNIKLEREITAENDHPFIIRLVRTFKDSNCFYFLTELVTGGELYDAIRKLGLLSKPQAQFYLGSIILAIEYLHERNIVYRDLKPENILLDKQGYVKLIDFGCAKKIQGRAYTLVGTPHYMAPEVILGKGYGCTVDIWALGVCLYEFICGPLPFGNDQEDQLEIFRDILTGQLTFPDYVSDQDSINLMKRLLCRLPQGRIGCSINGFKDIKEHAFFGNFNWDKLAGRLLEPPLVSKGETY 815
                               ||   13|       29        39        49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       259       269       279       289       299       309       322       332       342       352       362       372       382       392       402       412       422       432       442       452       462       472       482       492       502       512       522       532       542       552       562       572       582       592       602       612       622       632       642       652       662       672       682       692       702       712       722       732       742       752       762       772       782       792       802       812   
                               5|   13|                                                                                                                                                                                                                                                                                                       318|                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             
                                8    20                                                                                                                                                                                                                                                                                                        322
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 5EZR)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 5EZR)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 5EZR)

(-) Gene Ontology  (8, 8)

Asymmetric/Biological Unit(hide GO term definitions)

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UniProtKB/TrEMBL
        A5K0N4_PLAVS | A5K0N4: 4rz7 5dyl 5dzc 5f0a 5fet

(-) Related Entries Specified in the PDB File

5f0a