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(-) Description

Title :  STRUCTURE OF ASPERGILLUS FUMIGATUS UDP-GALACTOPYRANOSE MUTASE MUTANT Y317A
 
Authors :  I. A. Qureshi, R. Chaudhary, J. J. Tanner
Date :  03 Aug 14  (Deposition) - 03 Dec 14  (Release) - 24 Dec 14  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.30
Chains :  Asym./Biol. Unit :  A,B,C,D
Keywords :  Nucleotide Binding, Mutase, Flavin Adenine Dinucleotide Binding, Isomerase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  I. Da Fonseca, I. A. Qureshi, R. Mehra-Chaudhary, K. Kizjakina, J. J. Tanner, P. Sobrado
Contributions Of Unique Active Site Residues Of Eukaryotic Udp-Galactopyranose Mutases To Substrate Recognition And Active Site Dynamics.
Biochemistry V. 53 7794 2014
PubMed-ID: 25412209  |  Reference-DOI: 10.1021/BI501008Z

(-) Compounds

Molecule 1 - UDP-GALACTOPYRANOSE MUTASE
    Chains: A, B, C, D
    EC Number: 5.4.99.9
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Expression System Vector Type: PLASMID
    Gene: GLF, GLFA
    Mutation: YES
    Organism Scientific: ASPERGILLUS FUMIGATUS
    Organism Taxid: 746128

 Structural Features

(-) Chains, Units

  1234
Asymmetric/Biological Unit : ABCD

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (3, 44)

Asymmetric/Biological Unit (3, 44)
No.NameCountTypeFull Name
1EDO17Ligand/Ion1,2-ETHANEDIOL
2FDA4Ligand/IonDIHYDROFLAVINE-ADENINE DINUCLEOTIDE
3SO423Ligand/IonSULFATE ION

(-) Sites  (44, 44)

Asymmetric Unit (44, 44)
No.NameEvidenceResiduesDescription
01AC1SOFTWAREGLY A:14 , GLY A:16 , PRO A:17 , THR A:18 , ASP A:38 , SER A:39 , GLY A:45 , LEU A:46 , ALA A:47 , VAL A:60 , GLY A:62 , HIS A:63 , VAL A:64 , GLY A:240 , LYS A:241 , VAL A:242 , MET A:269 , THR A:295 , GLU A:373 , GLY A:418 , GLY A:446 , ARG A:447 , GLY A:456 , ASN A:457 , GLN A:458 , SER A:461 , EDO A:612 , HOH A:734 , HOH A:741 , HOH A:773 , HOH A:844 , HOH A:850 , HOH A:854binding site for residue FDA A 601
02AC2SOFTWAREPRO A:307 , GLU A:308 , ARG A:309binding site for residue SO4 A 602
03AC3SOFTWAREASN A:40 , ARG A:413 , HOH A:779binding site for residue SO4 A 603
04AC4SOFTWARELYS A:82 , GLU A:83binding site for residue SO4 A 604
05AC5SOFTWARELYS A:70 , ARG A:496binding site for residue SO4 A 605
06AC6SOFTWAREVAL A:147 , THR A:152 , ARG A:160 , HOH A:704binding site for residue SO4 A 606
07AC7SOFTWAREARG A:91 , TYR A:104 , ASN A:203 , HOH A:742 , HOH A:868binding site for residue SO4 A 607
08AC8SOFTWAREGLU A:494 , HOH A:832 , TRP C:443 , ASN C:471binding site for residue EDO A 608
09AC9SOFTWARETRP A:443 , ASN A:471 , GLU C:494binding site for residue EDO A 609
10AD1SOFTWARETYR A:104 , MET A:159 , ASN A:163 , HOH A:878binding site for residue EDO A 610
11AD2SOFTWAREARG A:303 , ASP A:405 , GLU A:406binding site for residue EDO A 611
12AD3SOFTWAREGLY A:62 , VAL A:64 , TRP A:315 , ARG A:327 , FDA A:601binding site for residue EDO A 612
13AD4SOFTWAREPHE A:66 , SER A:67 , THR A:209 , HOH A:750binding site for residue EDO A 613
14AD5SOFTWARETYR A:453 , ASN A:457 , HOH A:857binding site for residue EDO A 614
15AD6SOFTWAREGLY B:14 , GLY B:16 , PRO B:17 , THR B:18 , ASP B:38 , SER B:39 , GLY B:45 , LEU B:46 , ALA B:47 , VAL B:60 , GLY B:62 , HIS B:63 , VAL B:64 , GLY B:240 , LYS B:241 , VAL B:242 , MET B:269 , THR B:295 , GLU B:373 , GLY B:418 , GLY B:446 , ARG B:447 , GLY B:456 , ASN B:457 , GLN B:458 , SER B:461 , EDO B:611 , HOH B:764 , HOH B:774 , HOH B:789 , HOH B:816binding site for residue FDA B 601
16AD7SOFTWAREGLU B:308 , ARG B:309 , LYS B:402 , HOH B:856binding site for residue SO4 B 602
17AD8SOFTWAREASN B:40 , ASP B:50 , ARG B:413binding site for residue SO4 B 603
18AD9SOFTWAREPRO B:114 , LYS B:115 , ASN B:383 , THR B:386 , HOH B:703binding site for residue SO4 B 604
19AE1SOFTWAREARG B:91 , TYR B:104 , ASN B:203 , TRP B:315 , HOH B:772 , HOH B:900binding site for residue SO4 B 605
20AE2SOFTWARELYS B:70 , ARG B:496binding site for residue SO4 B 606
21AE3SOFTWAREVAL B:147 , THR B:152 , ARG B:160 , HOH B:931 , HOH B:938binding site for residue SO4 B 607
22AE4SOFTWAREPRO B:114 , GLU B:116 , ASP B:390 , EDO B:609 , EDO B:613 , HOH B:711binding site for residue EDO B 608
23AE5SOFTWAREASN B:322 , CYS B:323 , PRO B:324 , ASP B:390 , ASN B:397 , EDO B:608 , HOH B:706binding site for residue EDO B 609
24AE6SOFTWARETRP B:443 , ASN B:471 , GLU D:494binding site for residue EDO B 610
25AE7SOFTWAREGLY B:62 , VAL B:64 , TRP B:315 , ARG B:327 , FDA B:601 , HOH B:740binding site for residue EDO B 611
26AE8SOFTWARETYR B:453 , ASN B:457binding site for residue EDO B 612
27AE9SOFTWAREGLN B:98 , GLU B:116 , GLU B:117 , ASP B:321 , CYS B:323 , PRO B:324 , EDO B:608binding site for residue EDO B 613
28AF1SOFTWAREGLU B:117 , LYS B:120 , HOH B:710binding site for residue EDO B 614
29AF2SOFTWAREGLY C:14 , GLY C:16 , PRO C:17 , THR C:18 , ASP C:38 , SER C:39 , GLY C:45 , LEU C:46 , ALA C:47 , VAL C:60 , GLY C:62 , HIS C:63 , VAL C:64 , GLY C:240 , VAL C:242 , MET C:269 , GLU C:373 , TYR C:419 , GLY C:446 , ARG C:447 , GLY C:456 , ASN C:457 , GLN C:458 , SER C:461 , EDO C:608 , HOH C:723 , HOH C:738 , HOH C:824binding site for residue FDA C 601
30AF3SOFTWAREPRO C:307 , GLU C:308 , ARG C:309 , LYS C:402 , HOH C:733binding site for residue SO4 C 602
31AF4SOFTWARETHR C:152 , ARG C:160binding site for residue SO4 C 603
32AF5SOFTWAREPRO C:114 , LYS C:115 , HOH C:792binding site for residue SO4 C 604
33AF6SOFTWARELYS C:70 , ARG C:496binding site for residue SO4 C 605
34AF7SOFTWAREARG C:91 , TYR C:104 , ASN C:203 , HOH C:814binding site for residue SO4 C 606
35AF8SOFTWAREASN C:40 , ASP C:50 , ARG C:413binding site for residue SO4 C 607
36AF9SOFTWAREVAL C:64 , PHE C:66 , ARG C:91 , ASN C:457 , FDA C:601binding site for residue EDO C 608
37AG1SOFTWAREGLY D:14 , GLY D:16 , PRO D:17 , THR D:18 , ASP D:38 , SER D:39 , GLY D:45 , LEU D:46 , ALA D:47 , VAL D:60 , GLY D:62 , HIS D:63 , VAL D:64 , GLY D:240 , VAL D:242 , MET D:269 , THR D:295 , GLU D:373 , GLY D:418 , TYR D:419 , GLY D:446 , ARG D:447 , GLY D:456 , ASN D:457 , GLN D:458 , SER D:461 , HOH D:752 , HOH D:753binding site for residue FDA D 601
38AG2SOFTWAREPRO D:307 , GLU D:308 , ARG D:309 , LYS D:402binding site for residue SO4 D 602
39AG3SOFTWARETHR D:152 , ARG D:160binding site for residue SO4 D 603
40AG4SOFTWAREVAL A:382 , ASN A:383 , GLN A:384 , GLU A:385 , LYS D:199 , THR D:200 , HOH D:703binding site for residue SO4 D 604
41AG5SOFTWAREASN D:40 , ASP D:50 , ARG D:413binding site for residue SO4 D 605
42AG6SOFTWAREPRO D:114 , LYS D:115binding site for residue SO4 D 606
43AG7SOFTWAREGLU B:494 , TRP D:443 , ASN D:471binding site for residue EDO D 607
44AG8SOFTWAREGLN D:107 , MET D:149 , PRO D:186 , ASN D:187binding site for residue EDO D 608

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4U8M)

(-) Cis Peptide Bonds  (8, 8)

Asymmetric/Biological Unit
No.Residues
1Tyr A:104 -Pro A:105
2Gly A:365 -Pro A:366
3Tyr B:104 -Pro B:105
4Gly B:365 -Pro B:366
5Tyr C:104 -Pro C:105
6Gly C:365 -Pro C:366
7Tyr D:104 -Pro D:105
8Gly D:365 -Pro D:366

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4U8M)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4U8M)

(-) Exons   (0, 0)

(no "Exon" information available for 4U8M)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:505
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeeeeeee..hhhhhhhhhhhhhhh...eeeee.....hhhh.eee.....eee.........hhhhhhhhhhhh.hhh.eeeee..eeeee..eeee.hhhhhhhhhhhhhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhh.hhhhh......hhhhhhhhhhhh..........eeeee....hhhhhhhhhhhhhhh.eee.hhh.eeeee....eeee....eeeeeeeee..hhhhhhhhhhhhhhhhhhhh..eeeeeeeeeeee...........eee.........eee.hhhhhhhhh......ee..ee..........ee...eeeeeeeeee.........hhhhhhhhhhhhh.......eeeeeeeeeeeeeee....hhhhhhhhhhhhhhh..eee.......hhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhh.........hhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4u8m A   3 HPDISVDVLVIGAGPTGLGAAKRLNQIDGPSWMIVDSNETPGGLASTDVTPEGFLYDVGGHVIFSHYKYFDDCLDEALPKEDDWYTHQRISYVRCQGQWVPYPFQNNISMLPKEEQVKCIDGMIDAALEARVANTKPKTFDEWIVRMMGTGIADLFMRPYNFKVWAVPTTKMQCAWLGERVAAPNLKAVTTNVILGKTAGNWGPNATFRFPARGGTGGIWIAVANTLPKEKTRFGEKGKVTKVNANNKTVTLQDGTTIGYKKLVSTMAVDFLAEAMNDQELVGLTKQLFYSSTHVIGVGVRGSRPERIGDKCWLAFPEDNCPFYRATIFSNYSPYNQPEASAALPTMQLADGSRPQSTEAKEGPYWSIMLEVSESSMKPVNQETILADCIQGLVNTEMLKPTDEIVSTYHRRFDHGYPTPTLEREGTLTQILPKLQDKDIWSRGRFGSWRYEVGNQDHSFMLGVEAVDNIVNGAVELTLNYPDFVNGRQNTERRLVDGAQVFAKS 507
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352       362       372       382       392       402       412       422       432       442       452       462       472       482       492       502     


Chain B from PDB  Type:PROTEIN  Length:505
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeeeeeee..hhhhhhhhhhhhhhh...eeeee.....hhhh.eee.....eee.........hhhhhhhhhhhh.hhh.eeeee..eeeee..eeee.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhh.hhhhh......hhhhhhhhhhhh..........eeeee...hhhhhhhhhhhhhhhh.eee.hhh.eeeee....eeee....eeeeeeeee..hhhhhhhhh.hhhhhhhhhh..eeeeeeeeeeee...........eee.........eee.hhhhhhhhh..........ee...............eeeeeeeeee.........hhhhhhhhhhhhh.......eeeeeeeeeeeeeee....hhhhhhhhhhhhhhh..eee.......hhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhh.........hhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4u8m B   3 HPDISVDVLVIGAGPTGLGAAKRLNQIDGPSWMIVDSNETPGGLASTDVTPEGFLYDVGGHVIFSHYKYFDDCLDEALPKEDDWYTHQRISYVRCQGQWVPYPFQNNISMLPKEEQVKCIDGMIDAALEARVANTKPKTFDEWIVRMMGTGIADLFMRPYNFKVWAVPTTKMQCAWLGERVAAPNLKAVTTNVILGKTAGNWGPNATFRFPARGGTGGIWIAVANTLPKEKTRFGEKGKVTKVNANNKTVTLQDGTTIGYKKLVSTMAVDFLAEAMNDQELVGLTKQLFYSSTHVIGVGVRGSRPERIGDKCWLAFPEDNCPFYRATIFSNYSPYNQPEASAALPTMQLADGSRPQSTEAKEGPYWSIMLEVSESSMKPVNQETILADCIQGLVNTEMLKPTDEIVSTYHRRFDHGYPTPTLEREGTLTQILPKLQDKDIWSRGRFGSWRYEVGNQDHSFMLGVEAVDNIVNGAVELTLNYPDFVNGRQNTERRLVDGAQVFAKS 507
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352       362       372       382       392       402       412       422       432       442       452       462       472       482       492       502     


Chain C from PDB  Type:PROTEIN  Length:505
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...ee..eeee..hhhhhhhhhhhhhhh...eeeee.....hhhh.eee.....eee.........hhhhhhhhhhhh.hhh.eeeee..eeeee..eeee.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhh.hhhhh......hhhhhhhhhhh...........eeeee...hhhhhhhhhhhhhhhh.eee.hhh.eeeee....eeee....eee..eeee..hhhhhhhhhhhhhhhhhhhh..eeeeeeeeeeee...........eee.........eee.hhhhhhhhh..........ee...............eeeeeeeeee.........hhhhhhhhhhhhh.......eeeeeeeeeeeeeee....hhhhhhhhhhhhhhhh.eee.......hhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhh.........hhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4u8m C   3 HPDISVDVLVIGAGPTGLGAAKRLNQIDGPSWMIVDSNETPGGLASTDVTPEGFLYDVGGHVIFSHYKYFDDCLDEALPKEDDWYTHQRISYVRCQGQWVPYPFQNNISMLPKEEQVKCIDGMIDAALEARVANTKPKTFDEWIVRMMGTGIADLFMRPYNFKVWAVPTTKMQCAWLGERVAAPNLKAVTTNVILGKTAGNWGPNATFRFPARGGTGGIWIAVANTLPKEKTRFGEKGKVTKVNANNKTVTLQDGTTIGYKKLVSTMAVDFLAEAMNDQELVGLTKQLFYSSTHVIGVGVRGSRPERIGDKCWLAFPEDNCPFYRATIFSNYSPYNQPEASAALPTMQLADGSRPQSTEAKEGPYWSIMLEVSESSMKPVNQETILADCIQGLVNTEMLKPTDEIVSTYHRRFDHGYPTPTLEREGTLTQILPKLQDKDIWSRGRFGSWRYEVGNQDHSFMLGVEAVDNIVNGAVELTLNYPDFVNGRQNTERRLVDGAQVFAKS 507
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352       362       372       382       392       402       412       422       432       442       452       462       472       482       492       502     


Chain D from PDB  Type:PROTEIN  Length:505
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...ee..eeee..hhhhhhhhhhhhhhh...eeeee.....hhhh.eee.....eee.........hhhhhhhhhhhh.hhh.eeeee..eeeee..eeee.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhh.hhhhh......hhhhhhhhhhhh..........eeeee...hhhhhhhhhhhhhhhh.eee.hhh.eeeee....eeee....eee..eeee..hhhhhhhhhhhhhhhhhhhh..eeeeeeeeeeee...........eee.........eeee.hhh...............ee...............eeeeeeeeee.........hhhhhhhhhhhhh.......eeeeeeeeeeeeeee....hhhhhhhhhhhhhhhh.eee.......hhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhh.........hhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4u8m D   3 HPDISVDVLVIGAGPTGLGAAKRLNQIDGPSWMIVDSNETPGGLASTDVTPEGFLYDVGGHVIFSHYKYFDDCLDEALPKEDDWYTHQRISYVRCQGQWVPYPFQNNISMLPKEEQVKCIDGMIDAALEARVANTKPKTFDEWIVRMMGTGIADLFMRPYNFKVWAVPTTKMQCAWLGERVAAPNLKAVTTNVILGKTAGNWGPNATFRFPARGGTGGIWIAVANTLPKEKTRFGEKGKVTKVNANNKTVTLQDGTTIGYKKLVSTMAVDFLAEAMNDQELVGLTKQLFYSSTHVIGVGVRGSRPERIGDKCWLAFPEDNCPFYRATIFSNYSPYNQPEASAALPTMQLADGSRPQSTEAKEGPYWSIMLEVSESSMKPVNQETILADCIQGLVNTEMLKPTDEIVSTYHRRFDHGYPTPTLEREGTLTQILPKLQDKDIWSRGRFGSWRYEVGNQDHSFMLGVEAVDNIVNGAVELTLNYPDFVNGRQNTERRLVDGAQVFAKS 507
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352       362       372       382       392       402       412       422       432       442       452       462       472       482       492       502
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4U8M)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4U8M)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4U8M)

(-) Gene Ontology  (5, 5)

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  Cis Peptide Bonds
    Gly A:365 - Pro A:366   [ RasMol ]  
    Gly B:365 - Pro B:366   [ RasMol ]  
    Gly C:365 - Pro C:366   [ RasMol ]  
    Gly D:365 - Pro D:366   [ RasMol ]  
    Tyr A:104 - Pro A:105   [ RasMol ]  
    Tyr B:104 - Pro B:105   [ RasMol ]  
    Tyr C:104 - Pro C:105   [ RasMol ]  
    Tyr D:104 - Pro D:105   [ RasMol ]  
 

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  4u8m
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    Orientation in Membranes: OPM
    Protein Surface: SURFACE
    Secondary Structure: DSSP (structure derived) | HSSP (homology derived)
    Structural Genomics: GeneCensus
    Structural Neighbours: CE | VAST
    Structure Classification: CATH | Dali | SCOP
    Validation and Original Data: BMRB Data View | BMRB Restraints Grid | EDS | PROCHECK | RECOORD | WHAT_CHECK
 
Access by UniProt ID/Accession number
  Q4W1X2_ASPFM | Q4W1X2
    Comparative Protein Structure Models: ModBase
    Genomic Information: Ensembl
    Protein-protein Interaction: DIP
    Sequence, Family and Domain Information: InterPro | Pfam | SMART | UniProtKB/TrEMBL
 
Access by Enzyme Classificator   (EC Number)
  5.4.99.9
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    Pathway: KEGG | MetaCyc
 
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  (no 'MIM ID' available)
    Disease Information: OMIM
 
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    Age Related Information: GenAge

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    Domain Information: XDom
    Interatomic Contacts of Structural Units: CSU
    Ligand-protein Contacts: LPC
    Protein Cavities: castP
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Access by UniProt ID/Accession number
  Q4W1X2_ASPFM | Q4W1X2
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        Q4W1X2_ASPFM | Q4W1X2: 5vwt 5vwu
UniProtKB/TrEMBL
        Q4W1X2_ASPFM | Q4W1X2: 3uka 3ukf 3ukh 3ukk 3ukl 3ukp 3ukq 3ute 3utf 3utg 3uth 4gdc 4gdd 4gde 4u8i 4u8j 4u8k 4u8l 4u8n 4u8o 4u8p 4wx1 5hhf

(-) Related Entries Specified in the PDB File

4u8i 4u8j 4u8k 4u8l 4u8n 4u8o 4u8p