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(-) Description

Title :  CRYSTAL STRUCTURE OF R327K UDP-GALACTOPYRANOSE MUTASE FROM ASPERGILLUS FUMIGATUS IN COMPLEX WITH UDPGALP
 
Authors :  K. E. Van Straaten, D. A. R. Sanders
Date :  09 Nov 11  (Deposition) - 22 Feb 12  (Release) - 18 Jul 12  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  3.15
Chains :  Asym. Unit :  A,B,C,D
Biol. Unit 1:  A (1x),B (1x),C (1x),D (1x)
Keywords :  Flavoenzyme, Fad, Isomerase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  K. E. Van Straaten, F. H. Routier, D. A. Sanders
Structural Insight Into The Unique Substrate Binding Mechanism And Flavin Redox State Of Udp-Galactopyranose Mutase From Aspergillus Fumigatus.
J. Biol. Chem. V. 287 10780 2012
PubMed-ID: 22334662  |  Reference-DOI: 10.1074/JBC.M111.322974

(-) Compounds

Molecule 1 - UDP-GALACTOPYRANOSE MUTASE
    Chains: A, B, C, D
    EC Number: 5.4.99.9
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PET22B
    Expression System Strain: BL21(DE3) GOLD
    Expression System Taxid: 469008
    Expression System Vector Type: PLASMID
    Gene: GLF, GLFA
    Mutation: YES
    Organism Scientific: ASPERGILLUS FUMIGATUS
    Organism Taxid: 746128
    Strain: CBS 144-89

 Structural Features

(-) Chains, Units

  1234
Asymmetric Unit : ABCD
Biological Unit 1 (1x): A (1x)B (1x)C (1x)D (1x)

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 8)

Asymmetric Unit (2, 8)
No.NameCountTypeFull Name
1FAD4Ligand/IonFLAVIN-ADENINE DINUCLEOTIDE
2GDU4Ligand/IonGALACTOSE-URIDINE-5'-DIPHOSPHATE
Biological Unit 1 (2, 4)
No.NameCountTypeFull Name
1FAD2Ligand/IonFLAVIN-ADENINE DINUCLEOTIDE
2GDU2Ligand/IonGALACTOSE-URIDINE-5'-DIPHOSPHATE

(-) Sites  (8, 8)

Asymmetric Unit (8, 8)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREGLY A:14 , GLY A:16 , PRO A:17 , THR A:18 , ASP A:38 , SER A:39 , GLY A:45 , LEU A:46 , VAL A:60 , GLY A:62 , HIS A:63 , VAL A:64 , GLY A:240 , VAL A:242 , MET A:269 , GLY A:418 , ARG A:447 , GLY A:456 , ASN A:457 , GLN A:458 , SER A:461 , GDU A:602 , HOH A:701 , HOH A:719 , HOH A:720BINDING SITE FOR RESIDUE FAD A 601
2AC2SOFTWAREGLY A:62 , VAL A:64 , TYR A:104 , PRO A:105 , PHE A:106 , GLN A:107 , PHE A:158 , MET A:159 , TYR A:162 , ASN A:163 , TRP A:167 , ARG A:182 , VAL A:183 , ASN A:207 , TRP A:315 , TYR A:317 , LYS A:327 , TYR A:419 , TYR A:453 , FAD A:601 , HOH A:717BINDING SITE FOR RESIDUE GDU A 602
3AC3SOFTWAREILE B:13 , GLY B:14 , GLY B:16 , PRO B:17 , THR B:18 , ASP B:38 , SER B:39 , GLY B:45 , LEU B:46 , ALA B:47 , VAL B:60 , GLY B:62 , HIS B:63 , VAL B:64 , VAL B:242 , THR B:268 , MET B:269 , THR B:295 , GLU B:373 , GLY B:418 , GLY B:446 , ARG B:447 , GLY B:456 , ASN B:457 , GLN B:458 , SER B:461 , GDU B:602 , HOH B:701 , HOH B:719 , HOH B:720BINDING SITE FOR RESIDUE FAD B 601
4AC4SOFTWAREGLY B:62 , TYR B:104 , PHE B:106 , GLN B:107 , PHE B:158 , MET B:159 , ASN B:163 , TRP B:167 , TRP B:178 , ARG B:182 , VAL B:183 , ASN B:207 , TRP B:315 , TYR B:317 , LYS B:327 , TYR B:419 , TYR B:453 , ASN B:457 , FAD B:601BINDING SITE FOR RESIDUE GDU B 602
5AC5SOFTWAREGLY C:14 , GLY C:16 , PRO C:17 , THR C:18 , ASP C:38 , SER C:39 , GLY C:45 , LEU C:46 , ALA C:47 , VAL C:60 , GLY C:62 , HIS C:63 , VAL C:64 , GLY C:240 , LYS C:241 , VAL C:242 , THR C:268 , MET C:269 , THR C:295 , GLU C:373 , GLY C:418 , GLY C:446 , ARG C:447 , ASN C:457 , GLN C:458 , SER C:461 , GDU C:602 , HOH C:702 , HOH C:713BINDING SITE FOR RESIDUE FAD C 601
6AC6SOFTWAREGLY C:62 , TYR C:104 , PHE C:106 , GLN C:107 , PHE C:158 , MET C:159 , TYR C:162 , ASN C:163 , TRP C:167 , TRP C:178 , ARG C:182 , VAL C:183 , ASN C:207 , TRP C:315 , TYR C:317 , LYS C:327 , TYR C:419 , TYR C:453 , ASN C:457 , FAD C:601BINDING SITE FOR RESIDUE GDU C 602
7AC7SOFTWAREGLY D:14 , GLY D:16 , PRO D:17 , THR D:18 , ASP D:38 , SER D:39 , GLY D:45 , LEU D:46 , VAL D:60 , GLY D:62 , HIS D:63 , VAL D:64 , GLY D:240 , VAL D:242 , MET D:269 , GLY D:418 , ARG D:447 , GLY D:456 , ASN D:457 , GLN D:458 , SER D:461 , GDU D:602 , HOH D:708BINDING SITE FOR RESIDUE FAD D 601
8AC8SOFTWAREGLY D:62 , TYR D:104 , PHE D:106 , GLN D:107 , PHE D:158 , MET D:159 , ASN D:163 , TRP D:167 , TRP D:178 , ARG D:182 , VAL D:183 , ASN D:207 , TRP D:315 , TYR D:317 , LYS D:327 , TYR D:419 , TYR D:453 , ASN D:457 , FAD D:601 , HOH D:702 , HOH D:709BINDING SITE FOR RESIDUE GDU D 602

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 3UKQ)

(-) Cis Peptide Bonds  (8, 8)

Asymmetric Unit
No.Residues
1Tyr A:104 -Pro A:105
2Gly A:365 -Pro A:366
3Tyr B:104 -Pro B:105
4Gly B:365 -Pro B:366
5Tyr C:104 -Pro C:105
6Gly C:365 -Pro C:366
7Tyr D:104 -Pro D:105
8Gly D:365 -Pro D:366

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 3UKQ)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 3UKQ)

(-) Exons   (0, 0)

(no "Exon" information available for 3UKQ)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:510
 aligned with Q4W1X2_ASPFM | Q4W1X2 from UniProtKB/TrEMBL  Length:510

    Alignment length:510
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      510 
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441       451       461       471       481       491       501        |-
         Q4W1X2_ASPFM     2 THPDISVDVLVIGAGPTGLGAAKRLNQIDGPSWMIVDSNETPGGLASTDVTPEGFLYDVGGHVIFSHYKYFDDCLDEALPKEDDWYTHQRISYVRCQGQWVPYPFQNNISMLPKEEQVKCIDGMIDAALEARVANTKPKTFDEWIVRMMGTGIADLFMRPYNFKVWAVPTTKMQCAWLGERVAAPNLKAVTTNVILGKTAGNWGPNATFRFPARGGTGGIWIAVANTLPKEKTRFGEKGKVTKVNANNKTVTLQDGTTIGYKKLVSTMAVDFLAEAMNDQELVGLTKQLFYSSTHVIGVGVRGSRPERIGDKCWLYFPEDNCPFYRATIFSNYSPYNQPEASKKLPTMQLADGSRPQSTEAKEGPYWSIMLEVSESSMKPVNQETILADCIQGLVNTEMLKPTDEIVSTYHRRFDHGYPTPTLEREGALTQILPKLQDKDIWSRGRFGSWRYEVGNQDHSFMLGVEAVDNIVNGAVELTLNYPDFVNGRQNTERRLVDGAQVFAKSKAQ-   -
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ....ee..eeee..hhhhhhhhhhhhhhh...eeeee.....hhhhh.ee.....ee..........hhhhhhhhhhhh.hhh.eeeee..eeee....eee.hhhhhhhhhhhhhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhhhhhhhhh..................hhhhhhhhhhhh..........eeeee....hhhhhhhhhhhhhhh.eee.hhh.eeeee....eeee....eee..eeee..hhhhhhhhhhhhhhhhhhh...eeeeeeeeeeee...........eee.........eeee.hhh...............ee...............eeeeeeeeee......hhhhhhhhhhhhhhhh.......eeeeeeeeeeeeeee....hhhhhhhhhhhhhhh..eee.......hhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhh.........hhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 3ukq A   2 THPDISVDVLVIGAGPTGLGAAKRLNQIDGPSWMIVDSNETPGGLASTDVTPEGFLYDVGGHVIFSHYKYFDDCLDEALPKEDDWYTHQRISYVRCQGQWVPYPFQNNISMLPKEEQVKCIDGMIDAALEARVANTKPKTFDEWIVRMMGTGIADLFMRPYNFKVWAVPTTKMQCAWLGERVAAPNLKAVTTNVILGKTAGNWGPNATFRFPARGGTGGIWIAVANTLPKEKTRFGEKGKVTKVNANNKTVTLQDGTTIGYKKLVSTMAVDFLAEAMNDQELVGLTKQLFYSSTHVIGVGVRGSRPERIGDKCWLYFPEDNCPFYKATIFSNYSPYNQPEASKKLPTMQLADGSRPQSTEAKEGPYWSIMLEVSESSMKPVNQETILADCIQGLVNTEMLKPTDEIVSTYHRRFDHGYPTPTLEREGALTQILPKLQDKDIWSRGRFGSWRYEVGNQDHSFMLGVEAVDNIVNGAVELTLNYPDFVNGRQNTERRLVDGAQVFAKSKAQL 511
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441       451       461       471       481       491       501       511


Chain B from PDB  Type:PROTEIN  Length:510
 aligned with Q4W1X2_ASPFM | Q4W1X2 from UniProtKB/TrEMBL  Length:510

    Alignment length:510
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      510 
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441       451       461       471       481       491       501        |-
         Q4W1X2_ASPFM     2 THPDISVDVLVIGAGPTGLGAAKRLNQIDGPSWMIVDSNETPGGLASTDVTPEGFLYDVGGHVIFSHYKYFDDCLDEALPKEDDWYTHQRISYVRCQGQWVPYPFQNNISMLPKEEQVKCIDGMIDAALEARVANTKPKTFDEWIVRMMGTGIADLFMRPYNFKVWAVPTTKMQCAWLGERVAAPNLKAVTTNVILGKTAGNWGPNATFRFPARGGTGGIWIAVANTLPKEKTRFGEKGKVTKVNANNKTVTLQDGTTIGYKKLVSTMAVDFLAEAMNDQELVGLTKQLFYSSTHVIGVGVRGSRPERIGDKCWLYFPEDNCPFYRATIFSNYSPYNQPEASKKLPTMQLADGSRPQSTEAKEGPYWSIMLEVSESSMKPVNQETILADCIQGLVNTEMLKPTDEIVSTYHRRFDHGYPTPTLEREGALTQILPKLQDKDIWSRGRFGSWRYEVGNQDHSFMLGVEAVDNIVNGAVELTLNYPDFVNGRQNTERRLVDGAQVFAKSKAQ-   -
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ....ee..eeee..hhhhhhhhhhhhhhh...eeeee.....hhhhh.ee.....ee..........hhhhhhhhhhhh.hhh.eeeee..eeee....eee.hhhhhhhhhhhhhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhhhhhhhhh..................hhhhhhhhhhhh..........eeeee..hhhhhhhhhhhhhhhhh.eee.hhh.eeeee....eeee....eee..eeee..hhhhhhhhhhhhhhhhhhh...eeeeeeeeeeee...........eee.........eee.hhhh...........ee..ee..........ee...eeeeeeeeee......hhhhhhhhhhhhhhhh.......eeeeeeeeeeeeeee....hhhhhhhhhhhhhhh..eee.......hhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhh.........hhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 3ukq B   2 THPDISVDVLVIGAGPTGLGAAKRLNQIDGPSWMIVDSNETPGGLASTDVTPEGFLYDVGGHVIFSHYKYFDDCLDEALPKEDDWYTHQRISYVRCQGQWVPYPFQNNISMLPKEEQVKCIDGMIDAALEARVANTKPKTFDEWIVRMMGTGIADLFMRPYNFKVWAVPTTKMQCAWLGERVAAPNLKAVTTNVILGKTAGNWGPNATFRFPARGGTGGIWIAVANTLPKEKTRFGEKGKVTKVNANNKTVTLQDGTTIGYKKLVSTMAVDFLAEAMNDQELVGLTKQLFYSSTHVIGVGVRGSRPERIGDKCWLYFPEDNCPFYKATIFSNYSPYNQPEASKKLPTMQLADGSRPQSTEAKEGPYWSIMLEVSESSMKPVNQETILADCIQGLVNTEMLKPTDEIVSTYHRRFDHGYPTPTLEREGALTQILPKLQDKDIWSRGRFGSWRYEVGNQDHSFMLGVEAVDNIVNGAVELTLNYPDFVNGRQNTERRLVDGAQVFAKSKAQL 511
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441       451       461       471       481       491       501       511


Chain C from PDB  Type:PROTEIN  Length:510
 aligned with Q4W1X2_ASPFM | Q4W1X2 from UniProtKB/TrEMBL  Length:510

    Alignment length:510
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      510 
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441       451       461       471       481       491       501        |-
         Q4W1X2_ASPFM     2 THPDISVDVLVIGAGPTGLGAAKRLNQIDGPSWMIVDSNETPGGLASTDVTPEGFLYDVGGHVIFSHYKYFDDCLDEALPKEDDWYTHQRISYVRCQGQWVPYPFQNNISMLPKEEQVKCIDGMIDAALEARVANTKPKTFDEWIVRMMGTGIADLFMRPYNFKVWAVPTTKMQCAWLGERVAAPNLKAVTTNVILGKTAGNWGPNATFRFPARGGTGGIWIAVANTLPKEKTRFGEKGKVTKVNANNKTVTLQDGTTIGYKKLVSTMAVDFLAEAMNDQELVGLTKQLFYSSTHVIGVGVRGSRPERIGDKCWLYFPEDNCPFYRATIFSNYSPYNQPEASKKLPTMQLADGSRPQSTEAKEGPYWSIMLEVSESSMKPVNQETILADCIQGLVNTEMLKPTDEIVSTYHRRFDHGYPTPTLEREGALTQILPKLQDKDIWSRGRFGSWRYEVGNQDHSFMLGVEAVDNIVNGAVELTLNYPDFVNGRQNTERRLVDGAQVFAKSKAQ-   -
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ....eeeeeeee..hhhhhhhhhhhhhhh...eeeee.....hhhhh.ee.....ee..........hhhhhhhhhhhh.hhh.eeeee..eeee....eee.hhhhhhhhhhhhhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhhhhhhhhh..................hhhhhhhhhhhh..........eeeee..hhhhhhhhhhhhhhhhh.eee.hhh.eeeee....eeee....eeeeeeeee..hhhhhhhhhhhhhhhhhhh...eeeeeeeeeeee...........eee.........eee.hhhh...............ee...............eeeeeeeeee......hhhhhhhhhhhhhhhh.......eeeeeeeeeeeeeee....hhhhhhhhhhhhhhh..eee.......hhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhh.........hhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 3ukq C   2 THPDISVDVLVIGAGPTGLGAAKRLNQIDGPSWMIVDSNETPGGLASTDVTPEGFLYDVGGHVIFSHYKYFDDCLDEALPKEDDWYTHQRISYVRCQGQWVPYPFQNNISMLPKEEQVKCIDGMIDAALEARVANTKPKTFDEWIVRMMGTGIADLFMRPYNFKVWAVPTTKMQCAWLGERVAAPNLKAVTTNVILGKTAGNWGPNATFRFPARGGTGGIWIAVANTLPKEKTRFGEKGKVTKVNANNKTVTLQDGTTIGYKKLVSTMAVDFLAEAMNDQELVGLTKQLFYSSTHVIGVGVRGSRPERIGDKCWLYFPEDNCPFYKATIFSNYSPYNQPEASKKLPTMQLADGSRPQSTEAKEGPYWSIMLEVSESSMKPVNQETILADCIQGLVNTEMLKPTDEIVSTYHRRFDHGYPTPTLEREGALTQILPKLQDKDIWSRGRFGSWRYEVGNQDHSFMLGVEAVDNIVNGAVELTLNYPDFVNGRQNTERRLVDGAQVFAKSKAQL 511
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441       451       461       471       481       491       501       511


Chain D from PDB  Type:PROTEIN  Length:510
 aligned with Q4W1X2_ASPFM | Q4W1X2 from UniProtKB/TrEMBL  Length:510

    Alignment length:510
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      510 
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441       451       461       471       481       491       501        |-
         Q4W1X2_ASPFM     2 THPDISVDVLVIGAGPTGLGAAKRLNQIDGPSWMIVDSNETPGGLASTDVTPEGFLYDVGGHVIFSHYKYFDDCLDEALPKEDDWYTHQRISYVRCQGQWVPYPFQNNISMLPKEEQVKCIDGMIDAALEARVANTKPKTFDEWIVRMMGTGIADLFMRPYNFKVWAVPTTKMQCAWLGERVAAPNLKAVTTNVILGKTAGNWGPNATFRFPARGGTGGIWIAVANTLPKEKTRFGEKGKVTKVNANNKTVTLQDGTTIGYKKLVSTMAVDFLAEAMNDQELVGLTKQLFYSSTHVIGVGVRGSRPERIGDKCWLYFPEDNCPFYRATIFSNYSPYNQPEASKKLPTMQLADGSRPQSTEAKEGPYWSIMLEVSESSMKPVNQETILADCIQGLVNTEMLKPTDEIVSTYHRRFDHGYPTPTLEREGALTQILPKLQDKDIWSRGRFGSWRYEVGNQDHSFMLGVEAVDNIVNGAVELTLNYPDFVNGRQNTERRLVDGAQVFAKSKAQ-   -
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ....eeeeeeee..hhhhhhhhhhhhhhh...eeeee.....hhhhh.ee.....ee..........hhhhhhhhhhhh.hhh.eeeee..eeee....eee.hhhhhhhhhhhhhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhhhhhhhhh..................hhhhhhhhhhhh..........eeeee....hhhhhhhhhhhhhhh.eee.hhh.eeeee....eeee....eeeeeeeee..hhhhhhhhhhhhhhhhhhh...eeeeeeeeeeee...........eee.........eee.hhhh...............ee...............eeeeeeeeee......hhhhhhhhhhhhhhhh.......eeeeeeeeeeeeeee....hhhhhhhhhhhhhhh..eee.......hhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhh.........hhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 3ukq D   2 THPDISVDVLVIGAGPTGLGAAKRLNQIDGPSWMIVDSNETPGGLASTDVTPEGFLYDVGGHVIFSHYKYFDDCLDEALPKEDDWYTHQRISYVRCQGQWVPYPFQNNISMLPKEEQVKCIDGMIDAALEARVANTKPKTFDEWIVRMMGTGIADLFMRPYNFKVWAVPTTKMQCAWLGERVAAPNLKAVTTNVILGKTAGNWGPNATFRFPARGGTGGIWIAVANTLPKEKTRFGEKGKVTKVNANNKTVTLQDGTTIGYKKLVSTMAVDFLAEAMNDQELVGLTKQLFYSSTHVIGVGVRGSRPERIGDKCWLYFPEDNCPFYKATIFSNYSPYNQPEASKKLPTMQLADGSRPQSTEAKEGPYWSIMLEVSESSMKPVNQETILADCIQGLVNTEMLKPTDEIVSTYHRRFDHGYPTPTLEREGALTQILPKLQDKDIWSRGRFGSWRYEVGNQDHSFMLGVEAVDNIVNGAVELTLNYPDFVNGRQNTERRLVDGAQVFAKSKAQL 511
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441       451       461       471       481       491       501       511
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 3UKQ)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 3UKQ)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 3UKQ)

(-) Gene Ontology  (5, 5)

Asymmetric Unit(hide GO term definitions)
Chain A,B,C,D   (Q4W1X2_ASPFM | Q4W1X2)
molecular function
    GO:0008767    UDP-galactopyranose mutase activity    Catalysis of the reaction: UDP-D-galactopyranose = UDP-D-galacto-1,4-furanose.
    GO:0016853    isomerase activity    Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5.
    GO:0000166    nucleotide binding    Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.
    GO:0016491    oxidoreductase activity    Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
biological process
    GO:0055114    oxidation-reduction process    A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        Q4W1X2_ASPFM | Q4W1X2: 5vwt 5vwu
UniProtKB/TrEMBL
        Q4W1X2_ASPFM | Q4W1X2: 3uka 3ukf 3ukh 3ukk 3ukl 3ukp 3ute 3utf 3utg 3uth 4gdc 4gdd 4gde 4u8i 4u8j 4u8k 4u8l 4u8m 4u8n 4u8o 4u8p 4wx1 5hhf

(-) Related Entries Specified in the PDB File

3uka CRYSTAL STRUCTURE OF UNLIGANDED AFUGM
3ukf CRYSTAL STRUCTURE OF AFUGM:UDPGALP COMPLEX (REDUCED)
3ukh CRYSTAL STRUCTURE OF AFUGM:UDPGALP COMPLEX (NON-REDUCED)
3ukk CRYSTAL STRUCTURE OF R182K-AFUGM IN COMPLEX WITH UDPGALP
3ukl CRYSTAL STRUCTURE OF AFUGM IN COMPLEX WITH UDP
3ukp CRYSTAL STRUCTURE OF R327A-AFUGM IN COMPLEX WITH UDPGALP