Show PDB file:   
         Plain Text   HTML   (compressed file size)
QuickSearch:   
by PDB,NDB,UniProt,PROSITE Code or Search Term(s)  
(-)Asym./Biol. Unit
(-)Asym./Biol. Unit - sites
collapse expand < >
Image Asym./Biol. Unit
Asym./Biol. Unit  (Jmol Viewer)
Image Asym./Biol. Unit - sites
Asym./Biol. Unit - sites  (Jmol Viewer)

(-) Description

Title :  CRYSTAL STRUCTURE OF ASPERGILLUS FUMIGATUS UDP GALACTOPYRANOSE MUTASE COMPLEXED WITH UDP IN REDUCED STATE
 
Authors :  R. Dhatwalia, H. Singh, J. J. Tanner
Date :  25 Nov 11  (Deposition) - 08 Feb 12  (Release) - 04 Apr 12  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.25
Chains :  Asym./Biol. Unit :  A,B,C,D
Keywords :  Nucleotide Binding, Mutase, Flavin Adenine Dinucleotide Binding, Isomerase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  R. Dhatwalia, H. Singh, M. Oppenheimer, D. B. Karr, J. C. Nix, P. Sobrado, J. J. Tanner
Crystal Structures And Small-Angle X-Ray Scattering Analysi Of Udp-Galactopyranose Mutase From The Pathogenic Fungus Aspergillus Fumigatus.
J. Biol. Chem. V. 287 9041 2012
PubMed-ID: 22294687  |  Reference-DOI: 10.1074/JBC.M111.327536

(-) Compounds

Molecule 1 - UDP-GALACTOPYRANOSE MUTASE
    Chains: A, B, C, D
    EC Number: 5.4.99.9
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PVP56K
    Expression System Taxid: 562
    Expression System Vector Type: PLASMID
    Gene: GLF, GLFA
    Mutation: YES
    Organism Scientific: ASPERGILLUS FUMIGATUS
    Organism Taxid: 746128

 Structural Features

(-) Chains, Units

  1234
Asymmetric/Biological Unit : ABCD

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (3, 24)

Asymmetric/Biological Unit (3, 24)
No.NameCountTypeFull Name
1FDA4Ligand/IonDIHYDROFLAVINE-ADENINE DINUCLEOTIDE
2SO418Ligand/IonSULFATE ION
3UDP2Ligand/IonURIDINE-5'-DIPHOSPHATE

(-) Sites  (24, 24)

Asymmetric Unit (24, 24)
No.NameEvidenceResiduesDescription
01AC1SOFTWAREGLY A:14 , GLY A:16 , PRO A:17 , THR A:18 , ASP A:38 , SER A:39 , GLY A:44 , GLY A:45 , LEU A:46 , ALA A:47 , VAL A:60 , GLY A:62 , HIS A:63 , VAL A:64 , GLY A:240 , VAL A:242 , MET A:269 , GLU A:373 , GLY A:418 , GLY A:446 , ARG A:447 , GLY A:456 , ASN A:457 , GLN A:458 , SER A:461 , HOH A:539 , HOH A:549 , HOH A:557 , HOH A:566 , HOH A:601 , HOH A:659BINDING SITE FOR RESIDUE FDA A 511
02AC2SOFTWAREPRO A:307 , GLU A:308 , ARG A:309 , LYS A:402 , HOH A:572BINDING SITE FOR RESIDUE SO4 A 512
03AC3SOFTWARELYS A:82 , GLU A:83BINDING SITE FOR RESIDUE SO4 A 513
04AC4SOFTWARELYS A:70 , ARG A:496BINDING SITE FOR RESIDUE SO4 A 514
05AC5SOFTWAREVAL A:95 , TYR A:104 , PRO A:105 , PHE A:106 , GLN A:107 , PHE A:158 , MET A:159 , ASN A:163 , TRP A:167 , ARG A:182 , VAL A:183 , TYR A:317 , ARG A:327 , TYR A:419 , TYR A:453 , HOH A:532 , HOH A:539 , HOH A:604 , HOH A:618 , HOH A:619 , HOH A:620 , HOH A:621BINDING SITE FOR RESIDUE UDP A 515
06AC6SOFTWAREGLY B:14 , GLY B:16 , PRO B:17 , THR B:18 , ASP B:38 , SER B:39 , GLY B:45 , LEU B:46 , ALA B:47 , VAL B:60 , GLY B:62 , HIS B:63 , VAL B:64 , GLY B:240 , VAL B:242 , MET B:269 , GLU B:373 , GLY B:418 , GLY B:446 , ARG B:447 , GLY B:456 , ASN B:457 , GLN B:458 , SER B:461 , HOH B:538 , HOH B:539 , HOH B:540 , HOH B:620 , HOH B:646 , HOH B:653 , HOH B:704BINDING SITE FOR RESIDUE FDA B 511
07AC7SOFTWAREASN B:40 , ASP B:50 , ARG B:413BINDING SITE FOR RESIDUE SO4 B 512
08AC8SOFTWAREPRO B:307 , GLU B:308 , ARG B:309 , LYS B:402 , HOH B:575BINDING SITE FOR RESIDUE SO4 B 513
09AC9SOFTWARETYR B:483 , PRO B:484 , ASP B:485 , PHE B:486BINDING SITE FOR RESIDUE SO4 B 514
10BC1SOFTWAREVAL B:95 , TYR B:104 , PRO B:105 , PHE B:106 , GLN B:107 , PHE B:158 , MET B:159 , ASN B:163 , TRP B:167 , ARG B:182 , VAL B:183 , TYR B:317 , ARG B:327 , TYR B:419 , TYR B:453 , HOH B:638 , HOH B:639 , HOH B:640 , HOH B:641 , HOH B:647 , HOH B:649 , HOH B:704BINDING SITE FOR RESIDUE UDP B 515
11BC2SOFTWAREGLY C:14 , GLY C:16 , PRO C:17 , THR C:18 , ASP C:38 , SER C:39 , GLY C:45 , LEU C:46 , ALA C:47 , VAL C:60 , GLY C:62 , HIS C:63 , VAL C:64 , GLY C:240 , VAL C:242 , MET C:269 , GLU C:373 , GLY C:418 , TYR C:419 , GLY C:446 , ARG C:447 , GLY C:456 , ASN C:457 , GLN C:458 , SER C:461 , HOH C:535 , HOH C:557 , HOH C:596 , HOH C:606 , HOH C:671BINDING SITE FOR RESIDUE FDA C 511
12BC3SOFTWAREPRO C:307 , GLU C:308 , ARG C:309 , HOH C:531BINDING SITE FOR RESIDUE SO4 C 512
13BC4SOFTWAREARG C:306 , ASP C:312BINDING SITE FOR RESIDUE SO4 C 513
14BC5SOFTWAREARG C:91 , TYR C:104 , ASN C:203 , HOH C:578 , HOH C:592 , HOH C:593BINDING SITE FOR RESIDUE SO4 C 514
15BC6SOFTWAREPRO C:114 , LYS C:115 , HOH C:570BINDING SITE FOR RESIDUE SO4 C 515
16BC7SOFTWARETHR C:152 , ARG C:160BINDING SITE FOR RESIDUE SO4 C 516
17BC8SOFTWAREARG C:309 , LYS C:402 , ASP C:405 , HOH C:659 , HOH C:660BINDING SITE FOR RESIDUE SO4 C 517
18BC9SOFTWAREGLY D:14 , GLY D:16 , PRO D:17 , THR D:18 , ASP D:38 , SER D:39 , GLY D:45 , LEU D:46 , ALA D:47 , VAL D:60 , GLY D:62 , HIS D:63 , VAL D:64 , GLY D:240 , VAL D:242 , MET D:269 , THR D:295 , GLU D:373 , GLY D:418 , TYR D:419 , GLY D:446 , ARG D:447 , GLY D:456 , ASN D:457 , GLN D:458 , SER D:461 , HOH D:542 , HOH D:557 , HOH D:580 , HOH D:651BINDING SITE FOR RESIDUE FDA D 511
19CC1SOFTWAREPRO D:307 , GLU D:308 , ARG D:309 , HOH D:559BINDING SITE FOR RESIDUE SO4 D 512
20CC2SOFTWAREARG D:306 , ASP D:312BINDING SITE FOR RESIDUE SO4 D 513
21CC3SOFTWAREARG D:91 , TYR D:104 , ASN D:203 , HOH D:522 , HOH D:562 , HOH D:608BINDING SITE FOR RESIDUE SO4 D 514
22CC4SOFTWAREPRO D:114 , LYS D:115 , HOH D:561BINDING SITE FOR RESIDUE SO4 D 515
23CC5SOFTWARETHR D:152 , ARG D:160 , HOH D:589BINDING SITE FOR RESIDUE SO4 D 516
24CC6SOFTWARETRP D:86 , TYR D:87 , THR D:88BINDING SITE FOR RESIDUE SO4 D 517

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 3UTG)

(-) Cis Peptide Bonds  (8, 8)

Asymmetric/Biological Unit
No.Residues
1Tyr A:104 -Pro A:105
2Gly A:365 -Pro A:366
3Tyr B:104 -Pro B:105
4Gly B:365 -Pro B:366
5Tyr C:104 -Pro C:105
6Gly C:365 -Pro C:366
7Tyr D:104 -Pro D:105
8Gly D:365 -Pro D:366

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 3UTG)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 3UTG)

(-) Exons   (0, 0)

(no "Exon" information available for 3UTG)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:505
 aligned with Q4W1X2_ASPFM | Q4W1X2 from UniProtKB/TrEMBL  Length:510

    Alignment length:505
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352       362       372       382       392       402       412       422       432       442       452       462       472       482       492       502     
         Q4W1X2_ASPFM     3 HPDISVDVLVIGAGPTGLGAAKRLNQIDGPSWMIVDSNETPGGLASTDVTPEGFLYDVGGHVIFSHYKYFDDCLDEALPKEDDWYTHQRISYVRCQGQWVPYPFQNNISMLPKEEQVKCIDGMIDAALEARVANTKPKTFDEWIVRMMGTGIADLFMRPYNFKVWAVPTTKMQCAWLGERVAAPNLKAVTTNVILGKTAGNWGPNATFRFPARGGTGGIWIAVANTLPKEKTRFGEKGKVTKVNANNKTVTLQDGTTIGYKKLVSTMAVDFLAEAMNDQELVGLTKQLFYSSTHVIGVGVRGSRPERIGDKCWLYFPEDNCPFYRATIFSNYSPYNQPEASKKLPTMQLADGSRPQSTEAKEGPYWSIMLEVSESSMKPVNQETILADCIQGLVNTEMLKPTDEIVSTYHRRFDHGYPTPTLEREGALTQILPKLQDKDIWSRGRFGSWRYEVGNQDHSFMLGVEAVDNIVNGAVELTLNYPDFVNGRQNTERRLVDGAQVFAKS 507
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeeeeeee..hhhhhhhhhhhhhhh...eeeee.....hhhh.eee.....eee.........hhhhhhhhhhhh.hhh.eeeee..eeeee..eeee.hhhhhhhhhhhhhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhh............hhhhhhhhhhhh..........eeeee....hhhhhhhhhhhhhhh.eee.hhh.eeeee....eeee....eeeeeeeee..hhhhhhhhh.hhhhhhhhh...eeeeeeeeeeee...........eee.........eeee.hhhhhhhh..........ee...............eeeeeeeeee.........hhhhhhhhhhhhh.......eeeeeeeeeeeeeee....hhhhhhhhhhhhhhh..eee.......hhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhh.........hhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3utg A   3 HPDISVDVLVIGAGPTGLGAAKRLNQIDGPSWMIVDSNETPGGLASTDVTPEGFLYDVGGHVIFSHYKYFDDCLDEALPKEDDWYTHQRISYVRCQGQWVPYPFQNNISMLPKEEQVKCIDGMIDAALEARVANTKPKTFDEWIVRMMGTGIADLFMRPYNFKVWAVPTTKMQCAWLGERVAAPNLKAVTTNVILGKTAGNWGPNATFRFPARGGTGGIWIAVANTLPKEKTRFGEKGKVTKVNANNKTVTLQDGTTIGYKKLVSTMAVDFLAEAMNDQELVGLTKQLFYSSTHVIGVGVRGSRPERIGDKCWLYFPEDNCPFYRATIFSNYSPYNQPEASAALPTMQLADGSRPQSTEAKEGPYWSIMLEVSESSMKPVNQETILADCIQGLVNTEMLKPTDEIVSTYHRRFDHGYPTPTLEREGTLTQILPKLQDKDIWSRGRFGSWRYEVGNQDHSFMLGVEAVDNIVNGAVELTLNYPDFVNGRQNTERRLVDGAQVFAKS 507
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352       362       372       382       392       402       412       422       432       442       452       462       472       482       492       502     


Chain B from PDB  Type:PROTEIN  Length:505
 aligned with Q4W1X2_ASPFM | Q4W1X2 from UniProtKB/TrEMBL  Length:510

    Alignment length:505
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352       362       372       382       392       402       412       422       432       442       452       462       472       482       492       502     
         Q4W1X2_ASPFM     3 HPDISVDVLVIGAGPTGLGAAKRLNQIDGPSWMIVDSNETPGGLASTDVTPEGFLYDVGGHVIFSHYKYFDDCLDEALPKEDDWYTHQRISYVRCQGQWVPYPFQNNISMLPKEEQVKCIDGMIDAALEARVANTKPKTFDEWIVRMMGTGIADLFMRPYNFKVWAVPTTKMQCAWLGERVAAPNLKAVTTNVILGKTAGNWGPNATFRFPARGGTGGIWIAVANTLPKEKTRFGEKGKVTKVNANNKTVTLQDGTTIGYKKLVSTMAVDFLAEAMNDQELVGLTKQLFYSSTHVIGVGVRGSRPERIGDKCWLYFPEDNCPFYRATIFSNYSPYNQPEASKKLPTMQLADGSRPQSTEAKEGPYWSIMLEVSESSMKPVNQETILADCIQGLVNTEMLKPTDEIVSTYHRRFDHGYPTPTLEREGALTQILPKLQDKDIWSRGRFGSWRYEVGNQDHSFMLGVEAVDNIVNGAVELTLNYPDFVNGRQNTERRLVDGAQVFAKS 507
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeeeeeee..hhhhhhhhhhhhhhh...eeeee.....hhhh.eee.....eee.........hhhhhhhhhhhh.hhh.eeeee..eeeee..eeee.hhhhhhhhhhhhhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhh............hhhhhhhhhhhh..........eeeee....hhhhhhhhhhhhhhh.eee.hhh.eeeee....eeee....eeeeeeeee..hhhhhhhhh.hhhhhhhhh...eeeeeeeeeeee...........eee.........eeee.hhhhhhhh......ee..ee..........ee...eeeeeeeeee.........hhhhhhhhhhhhh.......eeeeeeeeeeeeeee....hhhhhhhhhhhhhhh..eee.......hhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhh.........hhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3utg B   3 HPDISVDVLVIGAGPTGLGAAKRLNQIDGPSWMIVDSNETPGGLASTDVTPEGFLYDVGGHVIFSHYKYFDDCLDEALPKEDDWYTHQRISYVRCQGQWVPYPFQNNISMLPKEEQVKCIDGMIDAALEARVANTKPKTFDEWIVRMMGTGIADLFMRPYNFKVWAVPTTKMQCAWLGERVAAPNLKAVTTNVILGKTAGNWGPNATFRFPARGGTGGIWIAVANTLPKEKTRFGEKGKVTKVNANNKTVTLQDGTTIGYKKLVSTMAVDFLAEAMNDQELVGLTKQLFYSSTHVIGVGVRGSRPERIGDKCWLYFPEDNCPFYRATIFSNYSPYNQPEASAALPTMQLADGSRPQSTEAKEGPYWSIMLEVSESSMKPVNQETILADCIQGLVNTEMLKPTDEIVSTYHRRFDHGYPTPTLEREGTLTQILPKLQDKDIWSRGRFGSWRYEVGNQDHSFMLGVEAVDNIVNGAVELTLNYPDFVNGRQNTERRLVDGAQVFAKS 507
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352       362       372       382       392       402       412       422       432       442       452       462       472       482       492       502     


Chain C from PDB  Type:PROTEIN  Length:504
 aligned with Q4W1X2_ASPFM | Q4W1X2 from UniProtKB/TrEMBL  Length:510

    Alignment length:504
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352       362       372       382       392       402       412       422       432       442       452       462       472       482       492       502    
         Q4W1X2_ASPFM     3 HPDISVDVLVIGAGPTGLGAAKRLNQIDGPSWMIVDSNETPGGLASTDVTPEGFLYDVGGHVIFSHYKYFDDCLDEALPKEDDWYTHQRISYVRCQGQWVPYPFQNNISMLPKEEQVKCIDGMIDAALEARVANTKPKTFDEWIVRMMGTGIADLFMRPYNFKVWAVPTTKMQCAWLGERVAAPNLKAVTTNVILGKTAGNWGPNATFRFPARGGTGGIWIAVANTLPKEKTRFGEKGKVTKVNANNKTVTLQDGTTIGYKKLVSTMAVDFLAEAMNDQELVGLTKQLFYSSTHVIGVGVRGSRPERIGDKCWLYFPEDNCPFYRATIFSNYSPYNQPEASKKLPTMQLADGSRPQSTEAKEGPYWSIMLEVSESSMKPVNQETILADCIQGLVNTEMLKPTDEIVSTYHRRFDHGYPTPTLEREGALTQILPKLQDKDIWSRGRFGSWRYEVGNQDHSFMLGVEAVDNIVNGAVELTLNYPDFVNGRQNTERRLVDGAQVFAK 506
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ...eeeeeeee..hhhhhhhhhhhhhhh...eeeee.....hhhh.eee.....eee.........hhhhhhhhhhhh.hhh.eeeee..eeeee..eeee.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhh.hhhhh......hhhhhhhhhhhh..........eeeee....hhhhhhhhhhhhhhh.eee.hhh.eeeee....eeee....eeeeeeeee..hhhhhhhhh.hhhhhhhhh...eeeeeeeeeeee...........eee.........eeee.hhhhhhhh......ee..ee..........ee...eeeeeeeeee.........hhhhhhhhhhhhh.......eeeeeeeeeeeeeee....hhhhhhhhhhhhhhh..eee.......hhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhh.........hhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 3utg C   3 HPDISVDVLVIGAGPTGLGAAKRLNQIDGPSWMIVDSNETPGGLASTDVTPEGFLYDVGGHVIFSHYKYFDDCLDEALPKEDDWYTHQRISYVRCQGQWVPYPFQNNISMLPKEEQVKCIDGMIDAALEARVANTKPKTFDEWIVRMMGTGIADLFMRPYNFKVWAVPTTKMQCAWLGERVAAPNLKAVTTNVILGKTAGNWGPNATFRFPARGGTGGIWIAVANTLPKEKTRFGEKGKVTKVNANNKTVTLQDGTTIGYKKLVSTMAVDFLAEAMNDQELVGLTKQLFYSSTHVIGVGVRGSRPERIGDKCWLYFPEDNCPFYRATIFSNYSPYNQPEASAALPTMQLADGSRPQSTEAKEGPYWSIMLEVSESSMKPVNQETILADCIQGLVNTEMLKPTDEIVSTYHRRFDHGYPTPTLEREGTLTQILPKLQDKDIWSRGRFGSWRYEVGNQDHSFMLGVEAVDNIVNGAVELTLNYPDFVNGRQNTERRLVDGAQVFAK 506
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352       362       372       382       392       402       412       422       432       442       452       462       472       482       492       502    


Chain D from PDB  Type:PROTEIN  Length:505
 aligned with Q4W1X2_ASPFM | Q4W1X2 from UniProtKB/TrEMBL  Length:510

    Alignment length:505
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352       362       372       382       392       402       412       422       432       442       452       462       472       482       492       502     
         Q4W1X2_ASPFM     3 HPDISVDVLVIGAGPTGLGAAKRLNQIDGPSWMIVDSNETPGGLASTDVTPEGFLYDVGGHVIFSHYKYFDDCLDEALPKEDDWYTHQRISYVRCQGQWVPYPFQNNISMLPKEEQVKCIDGMIDAALEARVANTKPKTFDEWIVRMMGTGIADLFMRPYNFKVWAVPTTKMQCAWLGERVAAPNLKAVTTNVILGKTAGNWGPNATFRFPARGGTGGIWIAVANTLPKEKTRFGEKGKVTKVNANNKTVTLQDGTTIGYKKLVSTMAVDFLAEAMNDQELVGLTKQLFYSSTHVIGVGVRGSRPERIGDKCWLYFPEDNCPFYRATIFSNYSPYNQPEASKKLPTMQLADGSRPQSTEAKEGPYWSIMLEVSESSMKPVNQETILADCIQGLVNTEMLKPTDEIVSTYHRRFDHGYPTPTLEREGALTQILPKLQDKDIWSRGRFGSWRYEVGNQDHSFMLGVEAVDNIVNGAVELTLNYPDFVNGRQNTERRLVDGAQVFAKS 507
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeeeeeee..hhhhhhhhhhhhhhh...eeeee.....hhhh.eee.....eee.........hhhhhhhhhhhh.hhh.eeeee..eeeee..eeee.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhh.hhhhh......hhhhhhhhhhhh..........eeeee....hhhhhhhhhhhhhhh.eee.hhh.eeeee....eeee....eeeeeeeee..hhhhhhhhh.hhhhhhhhh...eeeeeeeeeeee...........eee.........eeee.hhhhhhhh.....eee..ee..........eee..eeeeeeeeee.........hhhhhhhhhhhhh.......eeeeeeeeeeeeeee....hhhhhhhhhhhhhhh..eee.......hhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhh.........hhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3utg D   3 HPDISVDVLVIGAGPTGLGAAKRLNQIDGPSWMIVDSNETPGGLASTDVTPEGFLYDVGGHVIFSHYKYFDDCLDEALPKEDDWYTHQRISYVRCQGQWVPYPFQNNISMLPKEEQVKCIDGMIDAALEARVANTKPKTFDEWIVRMMGTGIADLFMRPYNFKVWAVPTTKMQCAWLGERVAAPNLKAVTTNVILGKTAGNWGPNATFRFPARGGTGGIWIAVANTLPKEKTRFGEKGKVTKVNANNKTVTLQDGTTIGYKKLVSTMAVDFLAEAMNDQELVGLTKQLFYSSTHVIGVGVRGSRPERIGDKCWLYFPEDNCPFYRATIFSNYSPYNQPEASAALPTMQLADGSRPQSTEAKEGPYWSIMLEVSESSMKPVNQETILADCIQGLVNTEMLKPTDEIVSTYHRRFDHGYPTPTLEREGTLTQILPKLQDKDIWSRGRFGSWRYEVGNQDHSFMLGVEAVDNIVNGAVELTLNYPDFVNGRQNTERRLVDGAQVFAKS 507
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352       362       372       382       392       402       412       422       432       442       452       462       472       482       492       502
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 3UTG)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 3UTG)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 3UTG)

(-) Gene Ontology  (5, 5)

Asymmetric/Biological Unit(hide GO term definitions)
Chain A,B,C,D   (Q4W1X2_ASPFM | Q4W1X2)
molecular function
    GO:0008767    UDP-galactopyranose mutase activity    Catalysis of the reaction: UDP-D-galactopyranose = UDP-D-galacto-1,4-furanose.
    GO:0016853    isomerase activity    Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5.
    GO:0000166    nucleotide binding    Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.
    GO:0016491    oxidoreductase activity    Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
biological process
    GO:0055114    oxidation-reduction process    A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.

 Visualization

(-) Interactive Views

Asymmetric/Biological Unit
  Complete Structure
    Jena3D(integrated viewing of ligand, site, SAP, PROSITE, SCOP information)
    WebMol | AstexViewer[tm]@PDBe
(Java Applets, require no local installation except for Java; loading may be slow)
    STRAP
(Java WebStart application, automatic local installation, requires Java; full application with system access!)
    RasMol
(require local installation)
    Molscript (VRML)
(requires installation of a VRML viewer; select preferred view via VRML and generate a mono or stereo PDF format file)
 
  Ligands, Modified Residues, Ions
    FDA  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
    SO4  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
    UDP  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
 
  Sites
    AC1  [ RasMol ]  +environment [ RasMol ]
    AC2  [ RasMol ]  +environment [ RasMol ]
    AC3  [ RasMol ]  +environment [ RasMol ]
    AC4  [ RasMol ]  +environment [ RasMol ]
    AC5  [ RasMol ]  +environment [ RasMol ]
    AC6  [ RasMol ]  +environment [ RasMol ]
    AC7  [ RasMol ]  +environment [ RasMol ]
    AC8  [ RasMol ]  +environment [ RasMol ]
    AC9  [ RasMol ]  +environment [ RasMol ]
    BC1  [ RasMol ]  +environment [ RasMol ]
    BC2  [ RasMol ]  +environment [ RasMol ]
    BC3  [ RasMol ]  +environment [ RasMol ]
    BC4  [ RasMol ]  +environment [ RasMol ]
    BC5  [ RasMol ]  +environment [ RasMol ]
    BC6  [ RasMol ]  +environment [ RasMol ]
    BC7  [ RasMol ]  +environment [ RasMol ]
    BC8  [ RasMol ]  +environment [ RasMol ]
    BC9  [ RasMol ]  +environment [ RasMol ]
    CC1  [ RasMol ]  +environment [ RasMol ]
    CC2  [ RasMol ]  +environment [ RasMol ]
    CC3  [ RasMol ]  +environment [ RasMol ]
    CC4  [ RasMol ]  +environment [ RasMol ]
    CC5  [ RasMol ]  +environment [ RasMol ]
    CC6  [ RasMol ]  +environment [ RasMol ]
 
  Cis Peptide Bonds
    Gly A:365 - Pro A:366   [ RasMol ]  
    Gly B:365 - Pro B:366   [ RasMol ]  
    Gly C:365 - Pro C:366   [ RasMol ]  
    Gly D:365 - Pro D:366   [ RasMol ]  
    Tyr A:104 - Pro A:105   [ RasMol ]  
    Tyr B:104 - Pro B:105   [ RasMol ]  
    Tyr C:104 - Pro C:105   [ RasMol ]  
    Tyr D:104 - Pro D:105   [ RasMol ]  
 

(-) Still Images

Jmol
  protein: cartoon or spacefill or dots and stick; nucleic acid: cartoon and stick; ligands: spacefill; active site: stick
[ Asym./Biol. Unit PNG format | Asym./Biol. Unit - sites PNG format ](automatic orientation, automatically generated)
Molscript
  protein, nucleic acid: cartoon; ligands: spacefill; active site: ball and stick
[ mono PDF format | stereo PDF format ](default orientation, automatically generated)

 Databases and Analysis Tools

(-) Databases

Access by PDB/NDB ID
  3utg
    Family and Domain Information: ProDom | SYSTERS
    General Structural Information: GlycoscienceDB | MMDB | NDB | OCA | PDB | PDBe | PDBj | PDBsum | PDBWiki | PQS | PROTEOPEDIA
    Orientation in Membranes: OPM
    Protein Surface: SURFACE
    Secondary Structure: DSSP (structure derived) | HSSP (homology derived)
    Structural Genomics: GeneCensus
    Structural Neighbours: CE | VAST
    Structure Classification: CATH | Dali | SCOP
    Validation and Original Data: BMRB Data View | BMRB Restraints Grid | EDS | PROCHECK | RECOORD | WHAT_CHECK
 
Access by UniProt ID/Accession number
  Q4W1X2_ASPFM | Q4W1X2
    Comparative Protein Structure Models: ModBase
    Genomic Information: Ensembl
    Protein-protein Interaction: DIP
    Sequence, Family and Domain Information: InterPro | Pfam | SMART | UniProtKB/TrEMBL
 
Access by Enzyme Classificator   (EC Number)
  5.4.99.9
    General Enzyme Information: BRENDA | EC-PDB | Enzyme | IntEnz
    Pathway: KEGG | MetaCyc
 
Access by Disease Identifier   (MIM ID)
  (no 'MIM ID' available)
    Disease Information: OMIM
 
Access by GenAge ID
  (no 'GenAge ID' available)
    Age Related Information: GenAge

(-) Analysis Tools

Access by PDB/NDB ID
    Domain Information: XDom
    Interatomic Contacts of Structural Units: CSU
    Ligand-protein Contacts: LPC
    Protein Cavities: castP
    Sequence and Secondary Structure: PDBCartoon
    Structure Alignment: STRAP(Java WebStart application, automatic local installation, requires Java; full application with system access!)
    Structure and Sequence Browser: STING
 
Access by UniProt ID/Accession number
  Q4W1X2_ASPFM | Q4W1X2
    Protein Disorder Prediction: DisEMBL | FoldIndex | GLOBPLOT (for more information see DisProt)

 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        Q4W1X2_ASPFM | Q4W1X2: 5vwt 5vwu
UniProtKB/TrEMBL
        Q4W1X2_ASPFM | Q4W1X2: 3uka 3ukf 3ukh 3ukk 3ukl 3ukp 3ukq 3ute 3utf 3uth 4gdc 4gdd 4gde 4u8i 4u8j 4u8k 4u8l 4u8m 4u8n 4u8o 4u8p 4wx1 5hhf

(-) Related Entries Specified in the PDB File

3ute 3utf 3uth