4QIB - JenaLib

Title :   OXIDATION-MEDIATED INHIBITION OF THE PEPTIDYL-PROLYL ISOMERASE PIN1

Authors :   B. T. Innes, M. A. Sowole, L. Konermann, D. W. Litchfield, C. J. Brandl, B. H. Shilton

Date :   30 May 14 (Deposition) - 04 Feb 15 (Release) - 04 Mar 15 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   1.86

Chains :   Asym./Biol. Unit : A

Keywords :   Cis-Trans Isomerization, Oxidation Of Active Site Cysteine, Cysteine Sulfenic-Sulfinic Acid Redox Regulation, Parvulin, Isomerase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   B. T. Innes, M. A. Sowole, L. Gyenis, M. Dubinsky, L. Konermann, D. W. Litchfield, C. J. Brandl, B. H. Shilton
Peroxide-Mediated Oxidation And Inhibition Of The Peptidyl-Prolyl Isomerase Pin1.
Biochim. Biophys. Acta V. 1852 905 2015
PubMed-ID: 25595659 | Reference-DOI: 10.1016/J.BBADIS.2014.12.025

Compounds

Molecule 1 - PEPTIDYL-PROLYL CIS-TRANS ISOMERASE NIMA-INTERACTING 1
	Chains	:	A
	EC Number	:	5.2.1.8
	Engineered	:	YES
	Expression System	:	ESCHERICHIA COLI
	Expression System Plasmid	:	PPROEX-HTA PIN1
	Expression System Strain	:	BL21(DE3)
	Expression System Taxid	:	562
	Expression System Vector Type	:	PLASMID
	Gene	:	PIN1
	Mutation	:	YES
	Organism Common	:	HUMAN
	Organism Scientific	:	HOMO SAPIENS
	Organism Taxid	:	9606
	Synonym	:	PEPTIDYL-PROLYL CIS-TRANS ISOMERASE PIN1, PPIASE PIN1, ROTAMASE PIN1

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (3, 6)

Sites (5, 5)

Asymmetric Unit (5, 5)

No.	Name	Evidence	Residues	Description
1	AC1	SOFTWARE	TYR A:23 , ASN A:30 , ALA A:31 , SER A:32 , TRP A:34 , ILE A:93 , LYS A:97 , SER A:98 , MET A:146 , SER A:147 , GLY A:148 , HOH A:323 , HOH A:351 , HOH A:454 , HOH A:456	BINDING SITE FOR RESIDUE PE4 A 201
2	AC2	SOFTWARE	ARG A:80 , LEU A:88 , HOH A:322 , HOH A:446 , HOH A:452	BINDING SITE FOR RESIDUE SO4 A 202
3	AC3	SOFTWARE	LYS A:63 , ARG A:68 , ARG A:69 , SER A:154 , HOH A:459	BINDING SITE FOR RESIDUE SO4 A 203
4	AC4	SOFTWARE	ARG A:142 , THR A:143 , ARG A:161 , HOH A:426 , HOH A:450	BINDING SITE FOR RESIDUE SO4 A 204
5	AC5	SOFTWARE	SER A:72 , TRP A:73 , CSD A:113 , SER A:114 , HOH A:470	BINDING SITE FOR RESIDUE SO4 A 205

SS Bonds (0, 0)

Cis Peptide Bonds (0, 0)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (0, 0)

PROSITE Motifs (0, 0)

Exons (0, 0)

Sequences/Alignments

Asymmetric/Biological Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

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Chain A from PDB  Type:PROTEIN  Length:145
                                                                                                                                                                                 
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....eeeee......eeeee.....ee.........eeeeeeee..................hhhhhhhhhhhhhhhhhh...hhhhhhhhhh.hhhhhhh.eeeee.....hhhhhhhhhhh........eee..eeeeeee.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4qib A   7 LPPGWEKAMSRSSGRVYYFNHITNASQWERPSEPARVRCSHLLVKHSQSRRPSSWRQEKITRTKEEALELINGYIQKIKSGEEDFESLASQFSDcSSAKARGDLGAFSRGQMQKPFEDASFALRTGEMSGPVFTDSGIHIILRTE 163
                                    16        26        36 ||     58        68        78        88        98       108    |  118       128       138       148       158     
                                                          38|                                                           113-CSD                                              
                                                           51

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	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

Classification and Annotation

SCOP Domains (0, 0)

CATH Domains (0, 0)

Pfam Domains (0, 0)

Gene Ontology (42, 42)

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