4PEI - JenaLib

Asymmetric Unit (Jmol Viewer)

Asym. Unit - sites (Jmol Viewer)

Biological Unit 1 (Jmol Viewer)

Biol. Unit 1 - sites (Jmol Viewer)

Biological Unit 2 (Jmol Viewer)

Biological Unit 3 (Jmol Viewer)

Biological Unit 4 (Jmol Viewer)

Biological Unit 5 (Jmol Viewer)

Title :   DBR1 IN COMPLEX WITH SYNTHETIC BRANCHED RNA ANALOG

Authors :   E. J. Montemayor, A. Katolik, N. E. Clark, A. B. Taylor, J. P. Schuermann D. J. Combs, R. Johnsson, S. P. Holloway, S. W. Stevens, M. J. Damha, P. J

Date :   23 Apr 14 (Deposition) - 27 Aug 14 (Release) - 25 Feb 15 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   1.95

Chains :   Asym. Unit : A,B,C,D,E,Q,R,S,T,U,V,W,X,Y,Z
Biol. Unit 1: A,Q,V  (1x)
Biol. Unit 2: B,R,W  (1x)
Biol. Unit 3: C,S,X  (1x)
Biol. Unit 4: D,T,Y  (1x)
Biol. Unit 5: E,U,Z  (1x)

Keywords :   Nuclease, Phosphodiesterase, Metallohydrolase, Metallophosphoesterase, Lariat Rna, Hydrolase, Metalloenzyme, Hydrolase-Rna Complex (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   E. J. Montemayor, A. Katolik, N. E. Clark, A. B. Taylor, J. P. Schuermann, D. J. Combs, R. Johnsson, S. P. Holloway, S. W. Stevens, M. J. Damha, P. J. Hart
Structural Basis Of Lariat Rna Recognition By The Intron Debranching Enzyme Dbr1.
Nucleic Acids Res. V. 42 10845 2014
PubMed-ID: 25123664 | Reference-DOI: 10.1093/NAR/GKU725

Molecule 1 - RNA LARIAT DEBRANCHING ENZYME, PUTATIVE
	Chains	:	A, B, C, D, E
	Engineered	:	YES
	Expression System	:	SACCHAROMYCES CEREVISIAE
	Expression System Plasmid	:	YEP351
	Expression System Taxid	:	4932
	Expression System Vector Type	:	PLASMID
	Gene	:	EHI_062730
	Mutation	:	YES
	Organism Scientific	:	ENTAMOEBA HISTOLYTICA
	Organism Taxid	:	5759

*Molecule 2 - RNA (5'-R(UPAPAPCPA)-3')**
	Chains	:	V, W, X, Y, Z
	Engineered	:	YES
	Organism Scientific	:	SYNTHETIC CONSTRUCT
	Organism Taxid	:	32630
	Synthetic	:	YES

*Molecule 3 - RNA (5'-R((G46)PU)-3')*
	Chains	:	Q, R, S, T, U
	Engineered	:	YES
	Organism Scientific	:	SYNTHETIC CONSTRUCT
	Organism Taxid	:	32630
	Synthetic	:	YES

		1	2	3	4	5	6	7	8	9	10	11	12	13	14	15
Asymmetric Unit	:	A	B	C	D	E	Q	R	S	T	U	V	W	X	Y	Z
Biological Unit 1 (1x)	:	A					Q					V
Biological Unit 2 (1x)	:		B					R					W
Biological Unit 3 (1x)	:			C					S					X
Biological Unit 4 (1x)	:				D					T					Y
Biological Unit 5 (1x)	:					E					U					Z

Summary Information (see also Sequences/Alignments below)

Asymmetric Unit (5, 22)

No.	Name	Count	Type	Full Name
1	G46	5	Mod. Nucleotide	GUANOSINE-5'-MONOTHIOPHOSPHATE
2	GOL	6	Ligand/Ion	GLYCEROL
3	NI	5	Ligand/Ion	NICKEL (II) ION
4	PG4	1	Ligand/Ion	TETRAETHYLENE GLYCOL
5	SO4	5	Ligand/Ion	SULFATE ION

Biological Unit 1 (3, 4)

No.	Name	Count	Type	Full Name
1	G46	1	Mod. Nucleotide	GUANOSINE-5'-MONOTHIOPHOSPHATE
2	GOL	2	Ligand/Ion	GLYCEROL
3	NI	-1	Ligand/Ion	NICKEL (II) ION
4	PG4	-1	Ligand/Ion	TETRAETHYLENE GLYCOL
5	SO4	1	Ligand/Ion	SULFATE ION

Biological Unit 2 (3, 3)

No.	Name	Count	Type	Full Name
1	G46	1	Mod. Nucleotide	GUANOSINE-5'-MONOTHIOPHOSPHATE
2	GOL	-1	Ligand/Ion	GLYCEROL
3	NI	-1	Ligand/Ion	NICKEL (II) ION
4	PG4	1	Ligand/Ion	TETRAETHYLENE GLYCOL
5	SO4	1	Ligand/Ion	SULFATE ION

Biological Unit 3 (3, 4)

No.	Name	Count	Type	Full Name
1	G46	1	Mod. Nucleotide	GUANOSINE-5'-MONOTHIOPHOSPHATE
2	GOL	2	Ligand/Ion	GLYCEROL
3	NI	-1	Ligand/Ion	NICKEL (II) ION
4	PG4	-1	Ligand/Ion	TETRAETHYLENE GLYCOL
5	SO4	1	Ligand/Ion	SULFATE ION

Biological Unit 4 (3, 4)

No.	Name	Count	Type	Full Name
1	G46	1	Mod. Nucleotide	GUANOSINE-5'-MONOTHIOPHOSPHATE
2	GOL	2	Ligand/Ion	GLYCEROL
3	NI	-1	Ligand/Ion	NICKEL (II) ION
4	PG4	-1	Ligand/Ion	TETRAETHYLENE GLYCOL
5	SO4	1	Ligand/Ion	SULFATE ION

Biological Unit 5 (2, 2)

No.	Name	Count	Type	Full Name
1	G46	1	Mod. Nucleotide	GUANOSINE-5'-MONOTHIOPHOSPHATE
2	GOL	-1	Ligand/Ion	GLYCEROL
3	NI	-1	Ligand/Ion	NICKEL (II) ION
4	PG4	-1	Ligand/Ion	TETRAETHYLENE GLYCOL
5	SO4	1	Ligand/Ion	SULFATE ION

Asymmetric Unit (17, 17)

No.	Name	Evidence	Residues	Description
01	AC1	SOFTWARE	ASP A:45 , ASN A:90 , HIS A:180 , HIS A:230 , HOH A:550 , G46 Q:510	binding site for residue NI A 401
02	AC2	SOFTWARE	ARG A:50 , ASN A:95 , HIS A:99 , PRO A:146 , HOH A:508 , HOH A:524 , HOH A:703 , HOH A:737 , HOH A:744 , HOH A:813	binding site for residue SO4 A 402
03	AC3	SOFTWARE	GLY A:68 , ASP A:69 , HIS A:71 , LEU A:72 , HOH A:512 , HOH D:507	binding site for residue GOL A 403
04	AC4	SOFTWARE	TYR A:133 , ASP A:181 , LEU A:209 , GLY A:210 , SER A:211 , HOH A:670 , HOH A:791 , G46 Q:510 , HOH Q:601	binding site for residue GOL A 404
05	AC5	SOFTWARE	ASP B:45 , ASN B:90 , HIS B:180 , HIS B:230 , HOH B:511 , G46 R:510	binding site for residue NI B 401
06	AC6	SOFTWARE	ARG B:50 , ASN B:95 , HIS B:99 , HOH B:532 , HOH B:543 , HOH B:638 , HOH B:641 , HOH B:649	binding site for residue SO4 B 402
07	AC7	SOFTWARE	LEU B:98 , LYS B:140 , PRO B:141 , TYR B:142 , THR B:143 , ASP B:150 , LEU B:154 , GLN B:291 , HOH B:534	binding site for residue PG4 B 403
08	AC8	SOFTWARE	ASP C:45 , ASN C:90 , HIS C:180 , HIS C:230 , HOH C:825 , A X:503	binding site for residue NI C 401
09	AC9	SOFTWARE	ARG C:50 , ASN C:95 , HIS C:99 , PRO C:146 , HOH C:505 , HOH C:522 , HOH C:648 , HOH C:685 , HOH C:703	binding site for residue SO4 C 402
10	AD1	SOFTWARE	SER C:38 , LEU C:83 , ASN C:122 , LYS C:266 , THR C:267 , HOH C:625 , HOH C:701 , HOH C:770 , HOH C:799	binding site for residue GOL C 403
11	AD2	SOFTWARE	GLY C:190 , ASN C:191 , TYR C:192 , LYS C:193	binding site for residue GOL C 404
12	AD3	SOFTWARE	ASP D:45 , ASN D:90 , HIS D:180 , HIS D:230 , HOH D:800 , G46 T:510	binding site for residue NI D 401
13	AD4	SOFTWARE	ARG D:50 , ASN D:95 , HIS D:99 , PRO D:146 , HOH D:517 , HOH D:653 , HOH D:738	binding site for residue SO4 D 402
14	AD5	SOFTWARE	GLY D:68 , ASP D:69 , HIS D:71 , HOH D:505 , HOH D:523	binding site for residue GOL D 403
15	AD6	SOFTWARE	THR C:338 , PHE C:342 , TYR C:343 , HOH C:535 , HIS D:71 , GLU D:75 , LYS D:77 , HOH D:526	binding site for residue GOL D 404
16	AD7	SOFTWARE	ASP E:45 , ASN E:90 , HIS E:180 , HIS E:230 , HOH E:777 , A Z:503	binding site for residue NI E 401
17	AD8	SOFTWARE	ARG E:50 , ASN E:95 , HIS E:99 , HOH E:557 , HOH E:584 , HOH E:627 , HOH E:673 , HOH E:688 , HOH E:768	binding site for residue SO4 E 402

(no "SS Bond" information available for 4PEI)

Asymmetric Unit

No.	Residues
1	Tyr A:144	-	Pro A:145
2	Phe A:292	-	Pro A:293
3	Tyr B:144	-	Pro B:145
4	Phe B:292	-	Pro B:293
5	Tyr C:144	-	Pro C:145
6	Phe C:292	-	Pro C:293
7	Tyr D:144	-	Pro D:145
8	Phe D:292	-	Pro D:293
9	Tyr E:144	-	Pro E:145
10	Phe E:292	-	Pro E:293

(no "SAP(SNP)/Variant" information available for 4PEI)

(no "PROSITE Motif" information available for 4PEI)

(no "Exon" information available for 4PEI)

Asymmetric Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain A from PDB  Type:PROTEIN  Length:349
                                                                                                                                                                                                                                                                                                                                                                                             
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeee.....hhhhhhhhhhhhhhhhh..eeeeee........hhhhhhhh..hhhhh...hhhhhhh........eee......hhhhhhhh...eeee..eee...eeeeee..eeeeee....hhhhh...ee...hhhhhhh.....hhhhhhhh.........eeee.....hhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhh..eeee......eeeee..eeeee.....hhh.eeeeeee.......eehhhhhhhhhhhhhhhh...ee.....hhhhhhhh.hhhhhhhhhhhhhhhh.........hhhhhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4pei A   5 QIQHIAIVGSVHGKYREMYRQLSEYEKSTGKEISFVICTGDMQTLRYEADLVYLKVPPKYKQMGDFHLYYEGKEKAPYLTLFIGGNHESSNVLLHLYNGGFVCFNMYYLGVCSCININGLRIVGVSGIYKSFDEKKPYTYPPSPNDVVSLFHTRNYVIQMLSNLSQSSQIDISLSHDWPQGIVMKGNYKQLYRFQPGFKKDGASLGSPINKVILNTLKPKYWISGHMHCEYHAEEGPTHFIALGKIGYKNAISYLDLPLKQKTDLEYDKDWVCNLIMTWPAFSNKAQFPDLSYSISELLSKRTKELDKKIIELWEKYIGLKIIYDSDTFDIQFTSRRFYIEKIYNELNI 353
                                    14        24        34        44        54        64        74        84        94       104       114       124       134       144       154       164       174       184       194       204       214       224       234       244       254       264       274       284       294       304       314       324       334       344

Chain B from PDB  Type:PROTEIN  Length:349
                                                                                                                                                                                                                                                                                                                                                                                             
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeee.....hhhhhhhhhhhhhhhhh..eeeeee........hhhhhhhh..hhhhh...hhhhhhh........eee......hhhhhhhh...eeee..eee...eeeeee..eeeeee....hhhhh...ee...hhhhhhh......hhhhhhh.........eeee.....hhhhhhhhhhhhhhh.hhhhhhhhh.hhhhhhhhhhhh..eeee......eeeee..eeeee.....hhh.eeeeeee.......eehhhhhhhhhhhhhhh....ee.....hhhhhhhh.hhhhhhhhhhhhhhhh.........hhhhhhhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4pei B   5 QIQHIAIVGSVHGKYREMYRQLSEYEKSTGKEISFVICTGDMQTLRYEADLVYLKVPPKYKQMGDFHLYYEGKEKAPYLTLFIGGNHESSNVLLHLYNGGFVCFNMYYLGVCSCININGLRIVGVSGIYKSFDEKKPYTYPPSPNDVVSLFHTRNYVIQMLSNLSQSSQIDISLSHDWPQGIVMKGNYKQLYRFQPGFKKDGASLGSPINKVILNTLKPKYWISGHMHCEYHAEEGPTHFIALGKIGYKNAISYLDLPLKQKTDLEYDKDWVCNLIMTWPAFSNKAQFPDLSYSISELLSKRTKELDKKIIELWEKYIGLKIIYDSDTFDIQFTSRRFYIEKIYNELNI 353
                                    14        24        34        44        54        64        74        84        94       104       114       124       134       144       154       164       174       184       194       204       214       224       234       244       254       264       274       284       294       304       314       324       334       344

Chain C from PDB  Type:PROTEIN  Length:349
                                                                                                                                                                                                                                                                                                                                                                                             
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeee.....hhhhhhhhhhhhhhhhh..eeeeee........hhhhhhhh..hhhhh...hhhhhhh........eee......hhhhhhhh...eeee..eee...eeeeee..eeeeee....hhhhh...ee...hhhhhhh......hhhhhhh.........eeee.....hhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhh..eeee......eeeee..eeeee.........eeeeeee.......eehhhhhhhhhhhhhhhh...ee.....hhhhhhhh.hhhhhhhhhhhhhhhh.........hhhhhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4pei C   5 QIQHIAIVGSVHGKYREMYRQLSEYEKSTGKEISFVICTGDMQTLRYEADLVYLKVPPKYKQMGDFHLYYEGKEKAPYLTLFIGGNHESSNVLLHLYNGGFVCFNMYYLGVCSCININGLRIVGVSGIYKSFDEKKPYTYPPSPNDVVSLFHTRNYVIQMLSNLSQSSQIDISLSHDWPQGIVMKGNYKQLYRFQPGFKKDGASLGSPINKVILNTLKPKYWISGHMHCEYHAEEGPTHFIALGKIGYKNAISYLDLPLKQKTDLEYDKDWVCNLIMTWPAFSNKAQFPDLSYSISELLSKRTKELDKKIIELWEKYIGLKIIYDSDTFDIQFTSRRFYIEKIYNELNI 353
                                    14        24        34        44        54        64        74        84        94       104       114       124       134       144       154       164       174       184       194       204       214       224       234       244       254       264       274       284       294       304       314       324       334       344

Chain D from PDB  Type:PROTEIN  Length:349
                                                                                                                                                                                                                                                                                                                                                                                             
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeee.....hhhhhhhhhhhhhhhhh..eeeeee........hhhhhhhh..hhhhh...hhhhhhh........eee......hhhhhhhh...eeee..eee...eeeeee..eeeeee....hhhhh...ee...hhhhh........hhhhhhh.........eeee.....hhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhh..eeee......eeeee..eeeee.....hhh.eeeeeee.......eehhhhhhhhhhhhhhhh...ee.....hhhhhhh..hhhhhhhhhhhhhhhh.........hhhhhhhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4pei D   5 QIQHIAIVGSVHGKYREMYRQLSEYEKSTGKEISFVICTGDMQTLRYEADLVYLKVPPKYKQMGDFHLYYEGKEKAPYLTLFIGGNHESSNVLLHLYNGGFVCFNMYYLGVCSCININGLRIVGVSGIYKSFDEKKPYTYPPSPNDVVSLFHTRNYVIQMLSNLSQSSQIDISLSHDWPQGIVMKGNYKQLYRFQPGFKKDGASLGSPINKVILNTLKPKYWISGHMHCEYHAEEGPTHFIALGKIGYKNAISYLDLPLKQKTDLEYDKDWVCNLIMTWPAFSNKAQFPDLSYSISELLSKRTKELDKKIIELWEKYIGLKIIYDSDTFDIQFTSRRFYIEKIYNELNI 353
                                    14        24        34        44        54        64        74        84        94       104       114       124       134       144       154       164       174       184       194       204       214       224       234       244       254       264       274       284       294       304       314       324       334       344

Chain E from PDB  Type:PROTEIN  Length:348
                                                                                                                                                                                                                                                                                                                                                                                            
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .eeeeeee.....hhhhhhhhhhhhhhhhh..eeeeee........hhhhhhhh..hhhhh...hhhhhhh........eee......hhhhhhhh...eeee..eee...eeeeee..eeeeee....hhhhh...ee...hhhhh........hhhhhhhhhhh.....eeee.....hhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhh..eeee......eeeee..eeeee.....hhh.eeeeeee.......eehhhhhhhhhhhhhhhh...ee.....hhhhhhhh.hhhhhhhhhhhhhhhh.........hhhhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 4pei E   5 QIQHIAIVGSVHGKYREMYRQLSEYEKSTGKEISFVICTGDMQTLRYEADLVYLKVPPKYKQMGDFHLYYEGKEKAPYLTLFIGGNHESSNVLLHLYNGGFVCFNMYYLGVCSCININGLRIVGVSGIYKSFDEKKPYTYPPSPNDVVSLFHTRNYVIQMLSNLSQSSQIDISLSHDWPQGIVMKGNYKQLYRFQPGFKKDGASLGSPINKVILNTLKPKYWISGHMHCEYHAEEGPTHFIALGKIGYKNAISYLDLPLKQKTDLEYDKDWVCNLIMTWPAFSNKAQFPDLSYSISELLSKRTKELDKKIIELWEKYIGLKIIYDSDTFDIQFTSRRFYIEKIYNELN 352
                                    14        24        34        44        54        64        74        84        94       104       114       124       134       144       154       164       174       184       194       204       214       224       234       244       254       264       274       284       294       304       314       324       334       344

Chain Q from PDB  Type:RNA  Length:1
                                 
                 4pei Q   5 x 510
                                                                                                                                                                                                                                                                                                                                                                                        |
                                                                                                                                                                                                                                                                                                                                                                                      510-G46

Chain R from PDB  Type:RNA  Length:1
                                 
                 4pei R   5 x 510
                             |
                             |
                           510-G46

Chain S from PDB  Type:DNA  Length:1
                                 
                 4pei S   5 x 510
                             |
                             |
                           510-G46

Chain T from PDB  Type:DNA  Length:1
                                 
                 4pei T   5 x 510
                             |
                             |
                           510-G46

Chain U from PDB  Type:DNA  Length:1
                                 
                 4pei U   5 x 501
                             |
                             |
                           501-G46

Chain V from PDB  Type:DNA/RNA  Length:3
                                   
                 4pei V 501 ACA 503

Chain W from PDB  Type:DNA/RNA  Length:3
                                   
                 4pei W 501 ACA 503

Chain X from PDB  Type:DNA/RNA  Length:3
                                   
                 4pei X 501 ACA 503

Chain Y from PDB  Type:DNA  Length:2
                                  
                 4pei Y 500 AA 501

Chain Z from PDB  Type:DNA/RNA  Length:3
                                   
                 4pei Z 501 ACA 503

Legend:		→ Mismatch	(orange background)
	-	→ Gap	(green background, '-', border residues have a numbering label)
		→ Modified Residue	(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

(no "SCOP Domain" information available for 4PEI)

(no "CATH Domain" information available for 4PEI)

(no "Pfam Domain" information available for 4PEI)

Asymmetric Unit(hide GO term definitions)

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	Ligands, Modified Residues, Ions
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	Cis Peptide Bonds
		Phe A:292 - Pro A:293	[ RasMol ]
		Phe B:292 - Pro B:293	[ RasMol ]
		Phe C:292 - Pro C:293	[ RasMol ]
		Phe D:292 - Pro D:293	[ RasMol ]
		Phe E:292 - Pro E:293	[ RasMol ]
		Tyr A:144 - Pro A:145	[ RasMol ]
		Tyr B:144 - Pro B:145	[ RasMol ]
		Tyr C:144 - Pro C:145	[ RasMol ]
		Tyr D:144 - Pro D:145	[ RasMol ]
		Tyr E:144 - Pro E:145	[ RasMol ]

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	4pei
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	C4M1P9_ENTHI \| C4M1P9
		Protein Disorder Prediction	:	DisEMBL \| FoldIndex \| GLOBPLOT (for more information see DisProt)

UniProtKB/TrEMBL
	C4M1P9_ENTHI \| C4M1P9	:	4pef 4peg 4peh 5k71 5k73 5k77 5k78

Description

Compounds

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (5, 22)

Sites (17, 17)

SS Bonds (0, 0)

Cis Peptide Bonds (10, 10)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (0, 0)

PROSITE Motifs (0, 0)

Exons (0, 0)

Sequences/Alignments

Classification and Annotation

SCOP Domains (0, 0)

CATH Domains (0, 0)

Pfam Domains (0, 0)

Gene Ontology (6, 6)

Visualization

Interactive Views

Still Images

Databases and Analysis Tools

Databases

Analysis Tools

Related Entries

Entries Sharing at Least One Protein Chain (UniProt ID)

Related Entries Specified in the PDB File