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(-) Description

Title :  CRYSTAL STRUCTURE OF PRK1 CATALYTIC DOMAIN
 
Authors :  P. P. Chamberlain, S. Delker, Pagarigan B. , A. Mahmoudi, P. Jackson, M. Abbassian, J. Muir, N. Raheja, B. Cathers
Date :  13 Feb 14  (Deposition) - 27 Aug 14  (Release) - 27 Aug 14  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.00
Chains :  Asym./Biol. Unit :  A
Keywords :  Prk1, Pkn1, Protein Kinase C Related Kinase 1, Kinase, Protein Kinase, Atp Binding, Phosphorylation, Transferase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  P. Chamberlain, S. Delker, B. Pagarigan, A. Mahmoudi, P. Jackson, M. Abbasian, J. Muir, N. Raheja, B. Cathers
Crystal Structures Of Prk1 In Complex With The Clinical Compounds Lestaurtinib And Tofacitinib Reveal Ligand Induce Conformational Changes.
Plos One V. 9 03638 2014
PubMed-ID: 25111382  |  Reference-DOI: 10.1371/JOURNAL.PONE.0103638

(-) Compounds

Molecule 1 - SERINE/THREONINE-PROTEIN KINASE N1
    Chains: A
    EC Number: 2.7.11.13
    Engineered: YES
    Expression System: TRICHOPLUSIA NI
    Expression System Taxid: 7111
    Fragment: UNP RESIDUES 605-942
    Gene: PKN1, PAK1, PKN, PRK1, PRKCL1
    Organism Common: HUMAN
    Organism Scientific: HOMO SAPIENS
    Organism Taxid: 9606
    Synonym: PROTEASE-ACTIVATED KINASE 1, PAK-1, PROTEIN KINASE C-LIKE 1, PROTEIN KINASE C-LIKE PKN, PROTEIN KINASE PKN-ALPHA, PROTEIN-KINASE C-RELATED KINASE 1, SERINE-THREONINE PROTEIN KINASE N

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 2)

Asymmetric/Biological Unit (2, 2)
No.NameCountTypeFull Name
1SEP1Mod. Amino AcidPHOSPHOSERINE
2TPO1Mod. Amino AcidPHOSPHOTHREONINE

(-) Sites  (0, 0)

(no "Site" information available for 4OTD)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4OTD)

(-) Cis Peptide Bonds  (1, 1)

Asymmetric/Biological Unit
No.Residues
1Leu A:883 -Gly A:884

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4OTD)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4OTD)

(-) Exons   (0, 0)

(no "Exon" information available for 4OTD)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
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SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:336
                                                                                                                                                                                                                                                                                                                                                                                
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ......hhh.eeeeeeee.....eeeeeee.....eeeeeeeehhhhhhh.hhhhhhhhhhhhhhhhhhh......eeeeee...eeeeeee....eehhhhh.....hhhhhhhhhhhhhhhhhhhhhh.......hhh.eee.....eee.....................hhhhhhhhhhhh.....hhhhhhhhhhhhhhhhh.......hhhhhhhhhhhh........hhhhhhhhhhhh..hhhhh......hhhhhhhhhhhh..hhhhhhh....................hhhhhh..............hhhhhhh.....ee.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 4otd A 611 LRKSPLTLEDFKFLAVLGRGHFGKVLLSEFRPSGELFAIKALKKGDIVARDEVESLMCEKRILAAVTSAGHPFLVNLFGCFQTPEHVCFVMEYSAGGDLMLHIHSDVFSEPRAIFYSACVVLGLQFLHEHKIVYRDLKLDNLLLDTEGYVKIADFGLCKEGMGYGDRTStFCGTPEFLAPEVLTDTSYTRAVDWWGLGVLLYEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSAEAIGIMRRLLRRNPERRLGSSERDAEDVKKQPFFRTLGWEALLARRLPPPFVPTLSGRTDVSNFDEEFTGEAPTLsPPRDARPLTAAEQAAFLDFDFVAG 946
                                   620       630       640       650       660       670       680       690       700       710       720       730       740       750       760       770       780       790       800       810       820       830       840       850       860       870       880       890       900       910       920 |     930       940      
                                                                                                                                                                                                   780-TPO                                                                                                                                       922-SEP
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4OTD)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4OTD)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4OTD)

(-) Gene Ontology  (48, 48)

Asymmetric/Biological Unit(hide GO term definitions)

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  Cis Peptide Bonds
    Leu A:883 - Gly A:884   [ RasMol ]  
 

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        PKN1_HUMAN | Q16512: 1cxz 1urf 2rmk 4nkg 4otg 4oth 4oti

(-) Related Entries Specified in the PDB File

4otg 4oth 4oti