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(-) Description

Title :  PYRANOSE 2-OXIDASE V546C MUTANT WITH 3-FLUORINATED GLUCOSE
 
Authors :  T. C. Tan, O. Spadiut, R. Gandini, D. Haltrich, C. Divne
Date :  12 Sep 13  (Deposition) - 05 Feb 14  (Release) - 05 Feb 14  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.00
Chains :  Asym. Unit :  A
Biol. Unit 1:  A  (4x)
Keywords :  Gmc Oxidoreductase, Phbh Fold, Homotetramer, Fad-Binding, Substrate Complex, Flavinylation, Intracellular, Oxidoreductase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  T. C. Tan, O. Spadiut, R. Gandini, D. Haltrich, C. Divne
Structural Basis For Binding Of Fluorinated Glucose And Galactose To Trametes Multicolor Pyranose 2-Oxidase Variant With Improved Galactose Conversion.
Plos One V. 9 86736 2014
PubMed-ID: 24466218  |  Reference-DOI: 10.1371/JOURNAL.PONE.0086736

(-) Compounds

Molecule 1 - PYRANOSE 2-OXIDASE
    Chains: A
    EC Number: 1.1.3.10
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PET21(D+)
    Expression System Strain: BL21(DE3)
    Expression System Taxid: 469008
    Expression System Vector Type: PLASMID
    Gene: P2O
    Mutation: YES
    Organism Common: WHITE-ROT FUNGUS
    Organism Scientific: TRAMETES OCHRACEA
    Organism Taxid: 230624
    Synonym: PYRANOSE OXIDASE

 Structural Features

(-) Chains, Units

  1
Asymmetric Unit : A
Biological Unit 1 (4x): A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 2)

Asymmetric Unit (2, 2)
No.NameCountTypeFull Name
1FDA1Ligand/IonDIHYDROFLAVINE-ADENINE DINUCLEOTIDE
2G3F1Ligand/Ion3-DEOXY-3-FLUORO-BETA-D-GLUCOPYRANOSE
Biological Unit 1 (2, 8)
No.NameCountTypeFull Name
1FDA4Ligand/IonDIHYDROFLAVINE-ADENINE DINUCLEOTIDE
2G3F4Ligand/Ion3-DEOXY-3-FLUORO-BETA-D-GLUCOPYRANOSE

(-) Sites  (2, 2)

Asymmetric Unit (2, 2)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREGLY A:53 , GLY A:55 , PRO A:56 , ILE A:57 , ASP A:76 , ILE A:77 , THR A:158 , ARG A:159 , VAL A:160 , GLY A:163 , MET A:164 , HIS A:167 , TRP A:168 , THR A:169 , CYS A:170 , ALA A:171 , VAL A:281 , CYS A:283 , THR A:319 , ALA A:320 , HIS A:324 , LEU A:547 , ASN A:593 , THR A:595 , G3F A:802 , HOH A:917 , HOH A:936 , HOH A:941 , HOH A:1056 , HOH A:1105 , HOH A:1114 , HOH A:1133 , HOH A:1283BINDING SITE FOR RESIDUE FDA A 801
2AC2SOFTWARETHR A:169 , GLN A:448 , HIS A:450 , ASP A:452 , PHE A:454 , TYR A:456 , ARG A:472 , CYS A:546 , HIS A:548 , ASN A:593 , FDA A:801 , HOH A:1305BINDING SITE FOR RESIDUE G3F A 802

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4MOG)

(-) Cis Peptide Bonds  (1, 1)

Asymmetric Unit
No.Residues
1Arg A:265 -Pro A:266

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

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(-) PROSITE Motifs  (0, 0)

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(-) Exons   (0, 0)

(no "Exon" information available for 4MOG)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
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SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:573
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeee..hhhhhhhhhhhhhh..eeeee.................hhhhhhhhhhhhhhhhh..ee.................................hhhhh....ee....hhhhhh........hhhhh......hhhhhhhhhhhhhhhhhhhhhee......hhhhhhhhhhhhhhh......ee..eeeeeee..eeee.hhhhhh....eee..eeeeeeeee..eeeeeeee......eeeeeeee.....eeee.eeeeee.hhhhhhhhhhhh.............................eeeeeeeehhhhhhhhh...eee........eee..........hhhhhhhhhhhhhhh..............eee........eeeeee.............hhh.eeeeeeee........eeeeeeeee.....eeeeee.....hhhhhhhhhhhhhhhhhhh..eee......ee.....................................eee.hhhhh.......hhhhhhhhhhhhhhhhhhhh..... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4mog A  46 KYDVVIVGSGPIGCTYARELVGAGYKVAMFDIGEIDSGLKIGAHKKNTVEYQKNIDKFVNVIQGQLMSVSVPVNTLVVDTLSPTSWQASTFFVRNGSNPEQDPLRNLSGQAVTRVVGGMSTHWTCATPRFDREQRPLLVKDDADADDAEWDRLYTKAESYFQTGTDQFKESIRHNLVLNKLTEEYKGQRDFQQIPLAATRRSPTFVEWSSANTVFDLQNRPNTDAPEERFNLFPAVACERVVRNALNSEIESLHIHDLISGDRFEIKADVYVLTAGAVHNTQLLVNSGFGQLGRPNPANPPELLPSLGSYITEQSLVFCQTVMSTELIDSVKSDMTIRGTPGELTYSVTYTPGASTNKHPDWWNEKVKNHMMQHQEDPLPIPFEDPEPQVTTLFQPSHPWHTQIHRDAFSYGAVQQSIDSRLIVDWRFFGRTEPKEENKLWFSDKITDAYNMPQPTFDFRFPAGRTSKEAEDMMTDMCVMSAKIGGFLPGSLPQFMEPGLCLHLGGTHRMGFDEKEDNCCVNTDSRVFGFKNLFLGGCGNIPTAYGANPTLTAMSLAIKSCEYIKQNFTPSPF 618
                                    55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215       225       235       245       255       265       275       285       295       305       315       325       335       345       355       365       375       385       395       405       415       425       435       445       455       465       475       485       495       505       515       525       535       545       555       565       575       585       595       605       615
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 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4MOG)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4MOG)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4MOG)

(-) Gene Ontology  (6, 6)

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/TrEMBL
        Q7ZA32_TRAOC | Q7ZA32: 1tt0 2igk 2igm 2ign 2igo 3bg6 3bg7 3bly 3fdy 3k4b 3k4c 3k4j 3k4k 3k4l 3k4m 3k4n 3lsh 3lsi 3lsk 3lsm 3pl8 4moe 4mof 4moh 4moi 4moj 4mok 4mol 4mom 4moo 4mop 4moq 4mor 4mos

(-) Related Entries Specified in the PDB File

1tt0 2igo 3pl8 4moe 4mof 4moh 4moi 4moj 4mok 4mol 4mom 4moo 4mop 4moq 4mor 4mos