4LQH - JenaLib

Title :   HIGH RESOLUTION STRUCTURE OF NATIVE FROG M FERRITIN

Authors :   S. Mangani, F. Di Pisa, C. Pozzi, P. Turano, D. Lalli

Date :   18 Jul 13 (Deposition) - 23 Jul 14 (Release) - 15 Apr 15 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   1.16

Chains :   Asym. Unit : A
Biol. Unit 1: A  (24x)

Keywords :   Four Helix Bundle, Oxidoreductase, Ferroxidase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   C. Pozzi, F. Di Pisa, D. Lalli, C. Rosa, E. Theil, P. Turano, S. Mangani
Time-Lapse Anomalous X-Ray Diffraction Shows How Fe(2+) Substrate Ions Move Through Ferritin Protein Nanocages To Oxidoreductase Sites.
Acta Crystallogr. , Sect. D V. 71 941 2015
PubMed-ID: 25849404 | Reference-DOI: 10.1107/S1399004715002333

Compounds

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (2, 25)

Sites (24, 24)

Asymmetric Unit (24, 24)

No.	Name	Evidence	Residues	Description
01	AC1	SOFTWARE	HOH A:423 , HOH A:479 , HOH A:485 , HOH A:508 , HOH A:593 , HOH A:618	BINDING SITE FOR RESIDUE MG A 201
02	AC2	SOFTWARE	GLU A:136 , GLN A:137 , ASP A:140 , MG A:209 , HOH A:365 , HOH A:610 , HOH A:627 , HOH A:628	BINDING SITE FOR RESIDUE MG A 202
03	AC3	SOFTWARE	GLU A:57 , GLU A:136 , ASP A:140 , HOH A:606 , HOH A:623 , HOH A:629	BINDING SITE FOR RESIDUE MG A 203
04	AC4	SOFTWARE	SER A:10 , HOH A:355 , HOH A:395 , HOH A:404 , HOH A:603 , HOH A:617	BINDING SITE FOR RESIDUE MG A 204
05	AC5	SOFTWARE	HOH A:349 , HOH A:359 , HOH A:431 , HOH A:438	BINDING SITE FOR RESIDUE MG A 205
06	AC6	SOFTWARE	HOH A:394 , HOH A:399 , HOH A:406 , HOH A:476 , HOH A:614 , HOH A:616	BINDING SITE FOR RESIDUE MG A 206
07	AC7	SOFTWARE	HOH A:583 , HOH A:632	BINDING SITE FOR RESIDUE MG A 207
08	AC8	SOFTWARE	HOH A:345 , HOH A:384	BINDING SITE FOR RESIDUE MG A 208
09	AC9	SOFTWARE	GLU A:58 , GLU A:103 , GLN A:137 , ASP A:140 , MG A:202 , HOH A:365 , HOH A:433 , HOH A:627 , HOH A:628	BINDING SITE FOR RESIDUE MG A 209
10	BC1	SOFTWARE	HIS A:169	BINDING SITE FOR RESIDUE CL A 210
11	BC2	SOFTWARE	ARG A:5 , ASN A:7 , TYR A:8 , HOH A:548	BINDING SITE FOR RESIDUE CL A 211
12	BC3	SOFTWARE	ASN A:17 , HOH A:391	BINDING SITE FOR RESIDUE CL A 212
13	BC4	SOFTWARE	LYS A:82 , CL A:224 , HOH A:342	BINDING SITE FOR RESIDUE CL A 213
14	BC5	SOFTWARE	SER A:131 , GLU A:132 , TYR A:133 , GLU A:135 , GLU A:136 , HOH A:399 , HOH A:464	BINDING SITE FOR RESIDUE CL A 214
15	BC6	SOFTWARE	GLN A:101 , LEU A:102 , THR A:105 , HOH A:489	BINDING SITE FOR RESIDUE CL A 215
16	BC7	SOFTWARE	ASP A:87 , GLU A:88 , HOH A:473	BINDING SITE FOR RESIDUE CL A 217
17	BC8	SOFTWARE	SER A:10 , HOH A:564	BINDING SITE FOR RESIDUE CL A 218
18	BC9	SOFTWARE	ASP A:112 , HOH A:330 , HOH A:545	BINDING SITE FOR RESIDUE CL A 219
19	CC1	SOFTWARE	ASN A:7 , GLN A:108 , HOH A:361 , HOH A:387	BINDING SITE FOR RESIDUE CL A 220
20	CC2	SOFTWARE	ASN A:150 , CL A:222	BINDING SITE FOR RESIDUE CL A 221
21	CC3	SOFTWARE	ASN A:150 , SER A:170 , CL A:221	BINDING SITE FOR RESIDUE CL A 222
22	CC4	SOFTWARE	ASN A:21 , HOH A:461	BINDING SITE FOR RESIDUE CL A 223
23	CC5	SOFTWARE	GLN A:79 , ASP A:80 , LYS A:82 , LYS A:83 , CL A:213 , HOH A:431	BINDING SITE FOR RESIDUE CL A 224
24	CC6	SOFTWARE	ARG A:86 , HOH A:374 , HOH A:422	BINDING SITE FOR RESIDUE CL A 225

SS Bonds (0, 0)

Cis Peptide Bonds (1, 1)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (0, 0)

PROSITE Motifs (0, 0)

Exons (0, 0)

Sequences/Alignments

Asymmetric Unit

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	UniProt sequence: complete aligned part

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Chain A from PDB  Type:PROTEIN  Length:174
                                                                                                                                                                                                              
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ........hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.................hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhh.... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 4lqh A   1 VSQVRQNYHSDCEAAVNRMLNLELYASYTYSSMYAFFDRDDVALHNVAEFFKEHSHEEREHAEKFMKYQNKRGGRVVLQDIKKPERDEWGNTLEAMQAALQLEKTVNQALLDLHKLATDKVDPHLCDFLESEYLEEQVKDIKRIGDFITNLKRLGLPENGMGEYLFDKHSVKES 174
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170

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	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

Classification and Annotation

SCOP Domains (0, 0)

CATH Domains (0, 0)

Pfam Domains (0, 0)

Gene Ontology (8, 8)

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		Leu A:156 - Pro A:157	[ RasMol ]

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