4KE9 - JenaLib

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Biological Unit 4 (Jmol Viewer)

Title :   CRYSTAL STRUCTURE OF MONOGLYCERIDE LIPASE FROM BACILLUS SP. H257 IN COMPLEX WITH AN 1-STEARYOL GLYCEROL ANALOGUE

Authors :   S. Rengachari, P. Aschauer, K. Gruber, I. Dreveny, M. Oberer

Date :   25 Apr 13 (Deposition) - 18 Sep 13 (Release) - 20 Nov 13 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   2.20

Chains :   Asym. Unit : A,B,C,D
Biol. Unit 1: A  (1x)
Biol. Unit 2: B  (1x)
Biol. Unit 3: C  (1x)
Biol. Unit 4: D  (1x)

Keywords :   Alpha/Beta Hydrolase Fold, Monoglyceride Lipase, Hydrolase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   S. Rengachari, P. Aschauer, M. Schittmayer, N. Mayer, K. Gruber, R. Breinbauer, R. Birner-Gruenberger, I. Dreveny, M. Oberer
Conformational Plasticity And Ligand Binding Of Bacterial Monoacylglycerol Lipase.
J. Biol. Chem. V. 288 31093 2013
PubMed-ID: 24014019 | Reference-DOI: 10.1074/JBC.M113.491415

Molecule 1 - THERMOSTABLE MONOACYLGLYCEROL LIPASE
	Chains	:	A, B, C, D
	EC Number	:	3.1.1.23
	Engineered	:	YES
	Expression System	:	ESCHERICHIA COLI
	Expression System Strain	:	BL21(DE3)
	Expression System Taxid	:	469008
	Expression System Vector Type	:	PET28A(+)
	Organism Scientific	:	BACILLUS SP.
	Organism Taxid	:	129908
	Strain	:	H-257
	Synonym	:	MGLP

		1	2	3	4
Asymmetric Unit	:	A	B	C	D
Biological Unit 1 (1x)	:	A
Biological Unit 2 (1x)	:		B
Biological Unit 3 (1x)	:			C
Biological Unit 4 (1x)	:				D

Summary Information (see also Sequences/Alignments below)

Asymmetric Unit (1, 4)

No.	Name	Count	Type	Full Name
1	1R1	4	Ligand/Ion	HEXADECYL HYDROGEN (R)-(3-AZIDOPROPYL)PHOSPHONATE

Biological Unit 1 (1, 1)

No.	Name	Count	Type	Full Name
1	1R1	1	Ligand/Ion	HEXADECYL HYDROGEN (R)-(3-AZIDOPROPYL)PHOSPHONATE

Biological Unit 2 (1, 1)

No.	Name	Count	Type	Full Name
1	1R1	1	Ligand/Ion	HEXADECYL HYDROGEN (R)-(3-AZIDOPROPYL)PHOSPHONATE

Biological Unit 3 (1, 1)

No.	Name	Count	Type	Full Name
1	1R1	1	Ligand/Ion	HEXADECYL HYDROGEN (R)-(3-AZIDOPROPYL)PHOSPHONATE

Biological Unit 4 (1, 1)

No.	Name	Count	Type	Full Name
1	1R1	1	Ligand/Ion	HEXADECYL HYDROGEN (R)-(3-AZIDOPROPYL)PHOSPHONATE

Asymmetric Unit (4, 4)

No.	Name	Evidence	Residues	Description
1	AC1	SOFTWARE	PHE A:29 , SER A:97 , MET A:98 , ILE A:128 , MET A:132 , LEU A:142 , LEU A:168 , LEU A:170 , HIS A:226 , HOH A:451	BINDING SITE FOR RESIDUE 1R1 A 301
2	AC2	SOFTWARE	GLY B:28 , PHE B:29 , SER B:97 , MET B:98 , ILE B:128 , MET B:132 , LEU B:138 , LEU B:142 , ILE B:145 , LEU B:168 , VAL B:198 , HIS B:226	BINDING SITE FOR RESIDUE 1R1 B 301
3	AC3	SOFTWARE	GLY C:28 , PHE C:29 , THR C:30 , SER C:97 , MET C:98 , ALA C:127 , ILE C:128 , GLY C:131 , MET C:132 , LEU C:142 , ILE C:145 , GLY C:146 , THR C:164 , LEU C:167 , LEU C:170 , HIS C:226 , VAL C:227	BINDING SITE FOR RESIDUE 1R1 C 301
4	AC4	SOFTWARE	GLY D:28 , PHE D:29 , SER D:97 , MET D:98 , ILE D:128 , PRO D:139 , LEU D:142 , ILE D:145 , GLY D:146 , SER D:147 , ASP D:148 , GLU D:156 , LEU D:170 , HIS D:226	BINDING SITE FOR RESIDUE 1R1 D 301

(no "SS Bond" information available for 4KE9)

(no "Cis Peptide Bond" information available for 4KE9)

(no "SAP(SNP)/Variant" information available for 4KE9)

(no "PROSITE Motif" information available for 4KE9)

(no "Exon" information available for 4KE9)

Asymmetric Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain A from PDB  Type:PROTEIN  Length:247
                                                                                                                                                                                                                                                                                       
               SCOP domains d4ke9a_ A: automated matches                                                                                                                                                                                                                            SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...........eee....eeeeee.....hhhhhhhhhhhhhhh..eeee........hhhhhh..hhhhhhhhhhhhhhhhhh...eeeeeeehhhhhhhhhhhh....eeeeeee.....hhhhhhhh........eee.................eeehhhhhhhhhhhhhhhhhhhhh...eeeeee........hhhhhhhhhh....eeeeee...........hhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4ke9 A   3 EQYPVLSGAEPFYAENGPVGVLLVHGFTGTPHSMRPLAEAYAKAGYTVCLPRLKGHGTHYEDMERTTFHDWVASVEEGYGWLKQRCQTIFVTGLSMGGTLTLYLAEHHPDICGIVPINAAVDIPAIAAGMTGGGELPRYLDSIGSDLKNPDVKELAYEKTPTASLLQLARLMAQTKAKLDRIVCPALIFVSDEDHVVPPGNADIIFQGISSTEKEIVRLRNSYHVATLDYDQPMIIERSLEFFAKHA 249
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242

Chain B from PDB  Type:PROTEIN  Length:247
                                                                                                                                                                                                                                                                                       
               SCOP domains d4ke9b_ B: automated matches                                                                                                                                                                                                                            SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...........eee....eeeeee.....hhhhhhhhhhhhhhh..eeee........hhhhhh..hhhhhhhhhhhhhhhhhh...eeeeeeehhhhhhhhhhhhhh....eeeee.....hhhhhhhhh.......eee.................eeehhhhhhhhhhhhhhhhhhhhh...eeeeee.......hhhhhhhhhhh....eeeeee.....hhhhh.hhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4ke9 B   3 EQYPVLSGAEPFYAENGPVGVLLVHGFTGTPHSMRPLAEAYAKAGYTVCLPRLKGHGTHYEDMERTTFHDWVASVEEGYGWLKQRCQTIFVTGLSMGGTLTLYLAEHHPDICGIVPINAAVDIPAIAAGMTGGGELPRYLDSIGSDLKNPDVKELAYEKTPTASLLQLARLMAQTKAKLDRIVCPALIFVSDEDHVVPPGNADIIFQGISSTEKEIVRLRNSYHVATLDYDQPMIIERSLEFFAKHA 249
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242

Chain C from PDB  Type:PROTEIN  Length:246
                                                                                                                                                                                                                                                                                      
               SCOP domains d4ke9c_ C: automated matches                                                                                                                                                                                                                           SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ..........eee....eeeeee.....hhhhhhhhhhhhhhh..eeee........hhhhhh..hhhhhhhhhhhhhhhhhh...eeeeeeehhhhhhhhhhhhhh....eeeee.....hhhhhhhhh.......eee.................eeehhhhhhhhhhhhhhhhhhhhh...eeeeee........hhhhhhhhhh....eeeeee...........hhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 4ke9 C   4 QYPVLSGAEPFYAENGPVGVLLVHGFTGTPHSMRPLAEAYAKAGYTVCLPRLKGHGTHYEDMERTTFHDWVASVEEGYGWLKQRCQTIFVTGLSMGGTLTLYLAEHHPDICGIVPINAAVDIPAIAAGMTGGGELPRYLDSIGSDLKNPDVKELAYEKTPTASLLQLARLMAQTKAKLDRIVCPALIFVSDEDHVVPPGNADIIFQGISSTEKEIVRLRNSYHVATLDYDQPMIIERSLEFFAKHA 249
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243

Chain D from PDB  Type:PROTEIN  Length:247
                                                                                                                                                                                                                                                                                       
               SCOP domains d4ke9d_ D: automated matches                                                                                                                                                                                                                            SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...........eee....eeeeee.....hhhhhhhhhhhhhhh..eeee........hhhhhhh.hhhhhhhhhhhhhhhhhh...eeeeeeehhhhhhhhhhhhhh....eeeee.....hhhhhhhhh.......eee.................eeehhhhhhhhhhhhhhhhhhhhh...eeeeee........hhhhhhhhhh....eeeeee...........hhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4ke9 D   3 EQYPVLSGAEPFYAENGPVGVLLVHGFTGTPHSMRPLAEAYAKAGYTVCLPRLKGHGTHYEDMERTTFHDWVASVEEGYGWLKQRCQTIFVTGLSMGGTLTLYLAEHHPDICGIVPINAAVDIPAIAAGMTGGGELPRYLDSIGSDLKNPDVKELAYEKTPTASLLQLARLMAQTKAKLDRIVCPALIFVSDEDHVVPPGNADIIFQGISSTEKEIVRLRNSYHVATLDYDQPMIIERSLEFFAKHA 249
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242

Legend:		→ Mismatch	(orange background)
	-	→ Gap	(green background, '-', border residues have a numbering label)
		→ Modified Residue	(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

Asymmetric Unit

Classes(

)

Folds(

)

Superfamilies( (-)

)

Families(

)

Protein Domains( (-)

)

Organisms( (-)

)

Class: Alpha and beta proteins (a/b) (23833)

Fold: alpha/beta-Hydrolases (971)

Superfamily: alpha/beta-Hydrolases (971)

Family: automated matches (184)

Protein domain: automated matches (184)

Bacillus sp. [TaxId: 129908] (7)

1a	d4ke9a_	A:
1b	d4ke9b_	B:
1c	d4ke9c_	C:
1d	d4ke9d_	D:

(no "CATH Domain" information available for 4KE9)

(no "Pfam Domain" information available for 4KE9)

Asymmetric Unit(hide GO term definitions)

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	MGLP_BAC25 \| P82597	:	3rli 3rm3 4ke6 4ke7 4ke8 4kea 4lhe

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