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(-) Description

Title :  TUBULIN ACETYLTRANSFERASE MUTANT
 
Authors :  A. Roll-Mecak, V. Kizub, A. Szyk
Date :  19 Sep 12  (Deposition) - 07 Nov 12  (Release) - 22 Jul 15  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.45
Chains :  Asym./Biol. Unit :  A,B
Keywords :  Transferase, Tubulin Acetyltransferase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  V. Kormendi, A. Szyk, G. Piszczek, A. Roll-Mecak
Crystal Structures Of Tubulin Acetyltransferase Reveal A Conserved Catalytic Core And The Plasticity Of The Essentia N Terminus.
J. Biol. Chem. V. 287 41569 2012
PubMed-ID: 23105108  |  Reference-DOI: 10.1074/JBC.C112.421222

(-) Compounds

Molecule 1 - ALPHA-TUBULIN N-ACETYLTRANSFERASE
    Chains: A, B
    EC Number: 2.3.1.108
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Mutation: YES
    Organism Common: LEOPARD DANIO,ZEBRA DANIO,ZEBRA FISH
    Organism Scientific: DANIO RERIO
    Organism Taxid: 7955
    Synonym: ALPHA-TAT, TAT, ACETYLTRANSFERASE MEC-17 HOMOLOG

 Structural Features

(-) Chains, Units

  12
Asymmetric/Biological Unit : AB

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (3, 4)

Asymmetric/Biological Unit (3, 4)
No.NameCountTypeFull Name
1ACO2Ligand/IonACETYL COENZYME *A
2K1Ligand/IonPOTASSIUM ION
3PO41Ligand/IonPHOSPHATE ION

(-) Sites  (4, 4)

Asymmetric Unit (4, 4)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREALA A:117 , PHE A:118 , TYR A:119 , VAL A:120 , GLN A:125 , ARG A:126 , HIS A:127 , GLY A:128 , TYR A:129 , GLY A:130 , SER A:131 , ASP A:151 , PRO A:153 , SER A:154 , LYS A:156 , PHE A:157 , SER A:159 , PHE A:160 , LYS A:163 , ARG A:164 , HOH A:301 , HOH A:306 , THR B:40BINDING SITE FOR RESIDUE ACO A 201
2AC2SOFTWAREASP A:19 , LYS A:76 , ASP B:43BINDING SITE FOR RESIDUE K A 202
3AC3SOFTWAREHIS A:70 , LYS A:92 , HOH A:328 , HIS B:70 , LYS B:92BINDING SITE FOR RESIDUE PO4 A 203
4AC4SOFTWAREALA B:117 , PHE B:118 , TYR B:119 , VAL B:120 , GLN B:125 , ARG B:126 , HIS B:127 , GLY B:128 , TYR B:129 , GLY B:130 , SER B:131 , HIS B:140 , ASP B:151 , PRO B:153 , SER B:154 , LYS B:156 , PHE B:157 , SER B:159 , PHE B:160 , LYS B:163 , HOH B:305BINDING SITE FOR RESIDUE ACO B 201

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4H6U)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 4H6U)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4H6U)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4H6U)

(-) Exons   (0, 0)

(no "Exon" information available for 4H6U)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:165
                                                                                                                                                                                                     
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeeehhhhhhh..eeeeeehhhhhhhhhh........eeee..ee.....eeeeeee......eeeeeeeeee..eeee.....eeee..eeeeeeee.hhhh..hhhhhhhhhhhhhhh.hhhhheee..hhhhhhhhhhhh...........ee.hhhhh Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4h6u A  -3 SFTMDFPYDLNALFPERISVLDSNLSAGRKAHGRPDPLPQVTTVIDELGKNRHHLYLLKDGEGGRGVIVGFLKVGYKKLFLLDQRGAHLETEPLCVLAFYVTETLQRHGYGSELFDFMLKHKQVEPAQMAYDRPSPKFLSFLEKRYDLRNSVPQVNNFVVFAGFF 184
                              ||     7        17        27        37        47|       77 ||     89        99       109       119       129       139       149       159       169       179     
                             -1|                                            47|         79|                                                                                                      
                               1                                             68          82                                                                                                      


Chain B from PDB  Type:PROTEIN  Length:161
                                                                                                                                                                                                 
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....eeeehhhhhh...eeeeee.......eeee..ee........eeeeeee........eeeeeeeeee..eeee.....eeee..eeeeeeee.hhhh..hhhhhhhhhhhhhhh.hhhhheee..hhhhhhhhhhhhh..........ee.hhhhh. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4h6u B  -4 GSFTMDFPYDLNALFPERISVLDSNDPLPQVTTVIDELGKAQANRHHLYLLKDGEQNGGRGVIVGFLKVGYKKLFLLDQRGAHLETEPLCVLAFYVTETLQRHGYGSELFDFMLKHKQVEPAQMAYDRPSPKFLSFLEKRYDLRNSVPQVNNFVVFAGFFQ 185
                               ||    6        16    ||  37        47||      74        84        94       104       114       124       134       144       154       164       174       184 
                              -1|                  21|             48|                                                                                                                       
                                1                   33              66
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4H6U)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4H6U)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4H6U)

(-) Gene Ontology  (16, 16)

Asymmetric/Biological Unit(hide GO term definitions)

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  4h6u
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        ATAT_DANRE | Q6PH17: 4h6z 4hkf 4yrh

(-) Related Entries Specified in the PDB File

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