Show PDB file:   
         Plain Text   HTML   (compressed file size)
QuickSearch:   
by PDB,NDB,UniProt,PROSITE Code or Search Term(s)  
(-)Asymmetric Unit
(-)Asym. Unit - sites
(-)Biological Unit 1
(-)Biol. Unit 1 - sites
(-)Biological Unit 2
collapse expand < >
Image Asymmetric Unit
Asymmetric Unit  (Jmol Viewer)
Image Asym. Unit - sites
Asym. Unit - sites  (Jmol Viewer)
Image Biological Unit 1
Biological Unit 1  (Jmol Viewer)
Image Biol. Unit 1 - sites
Biol. Unit 1 - sites  (Jmol Viewer)
Image Biological Unit 2
Biological Unit 2  (Jmol Viewer)

(-) Description

Title :  CRYSTAL STRUCTURE OF DYP-TYPE PEROXIDASE (SCO3963) FROM STREPTOMYCES COELICOLOR
 
Authors :  T. Lukk, A. M. A. Hetta, A. Jones, J. Solbiati, S. Majumdar, J. E. Cronan, J. A. Gerlt, S. K. Nair
Date :  28 Aug 12  (Deposition) - 11 Sep 13  (Release) - 11 Sep 13  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.80
Chains :  Asym. Unit :  A,B,E,G
Biol. Unit 1:  A,B  (1x)
Biol. Unit 2:  E,G  (1x)
Keywords :  Ferridoxin-Like, Oxidoreductase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  T. Lukk, A. M. A. Hetta, A. Jones, J. Solbiati, S. Majumdar, J. E. Cronan J. A. Gerlt, S. K. Nair
Dyp-Type Peroxidases From Stretptomyces And Thermobifida Ca Modify Organosolv Lignin.
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - PUTATIVE UNCHARACTERIZED PROTEIN SCO3963
    Chains: B, A, E, G
    EC Number: 1.11.1.19
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PET15B
    Expression System Strain: BL21(DE3)
    Expression System Taxid: 469008
    Expression System Vector Type: PLASMID
    Gene: SCO3963
    Organism Scientific: STREPTOMYCES COELICOLOR
    Organism Taxid: 100226
    Strain: ATCC BAA-471 / A3(2) / M145
    Synonym: DYP-TYPE PEROXIDASE

 Structural Features

(-) Chains, Units

  1234
Asymmetric Unit : ABEG
Biological Unit 1 (1x): AB  
Biological Unit 2 (1x):   EG

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (4, 17)

Asymmetric Unit (4, 17)
No.NameCountTypeFull Name
1ACT1Ligand/IonACETATE ION
2GOL8Ligand/IonGLYCEROL
3HEM4Ligand/IonPROTOPORPHYRIN IX CONTAINING FE
4OXY4Ligand/IonOXYGEN MOLECULE
Biological Unit 1 (4, 9)
No.NameCountTypeFull Name
1ACT1Ligand/IonACETATE ION
2GOL4Ligand/IonGLYCEROL
3HEM2Ligand/IonPROTOPORPHYRIN IX CONTAINING FE
4OXY2Ligand/IonOXYGEN MOLECULE
Biological Unit 2 (3, 8)
No.NameCountTypeFull Name
1ACT-1Ligand/IonACETATE ION
2GOL4Ligand/IonGLYCEROL
3HEM2Ligand/IonPROTOPORPHYRIN IX CONTAINING FE
4OXY2Ligand/IonOXYGEN MOLECULE

(-) Sites  (17, 17)

Asymmetric Unit (17, 17)
No.NameEvidenceResiduesDescription
01AC1SOFTWAREASN B:245 , GLN B:249 , VAL B:250 , GLY B:252 , THR B:253 , ARG B:254 , ILE B:294 , MET B:296 , HIS B:353 , THR B:357 , ARG B:358 , PRO B:359 , ARG B:369 , PHE B:390 , PHE B:401 , GLN B:405 , LEU B:414 , OXY B:503 , HOH B:606 , HOH B:994 , HOH B:1046BINDING SITE FOR RESIDUE HEM B 501
02AC2SOFTWAREARG A:137 , ASP A:138 , HOH A:962 , HOH A:981 , GLU B:302 , LEU B:304 , LEU B:306 , GLN B:309 , HOH B:730 , HOH B:975BINDING SITE FOR RESIDUE GOL B 502
03AC3SOFTWAREASP B:251 , ARG B:369 , HEM B:501BINDING SITE FOR RESIDUE OXY B 503
04AC4SOFTWAREARG B:254 , GLU B:260 , ARG B:266BINDING SITE FOR RESIDUE ACT B 504
05AC5SOFTWAREGLY B:235 , ALA B:236 , THR B:237 , HOH B:772 , HOH B:849 , HOH B:932 , HOH B:944BINDING SITE FOR RESIDUE GOL B 505
06AC6SOFTWAREASN A:245 , GLN A:249 , VAL A:250 , GLY A:252 , THR A:253 , ARG A:254 , ILE A:294 , MET A:296 , HIS A:353 , THR A:357 , ARG A:358 , PRO A:359 , ARG A:369 , PHE A:390 , PHE A:401 , VAL A:404 , GLN A:405 , LEU A:414 , OXY A:503 , HOH A:614 , HOH A:701 , HOH A:874BINDING SITE FOR RESIDUE HEM A 501
07AC7SOFTWAREARG A:254 , ASN A:255 , GLU A:260 , ARG A:266 , PRO A:359 , HOH A:692 , HOH A:874BINDING SITE FOR RESIDUE GOL A 502
08AC8SOFTWAREASP A:251 , ARG A:369 , HEM A:501BINDING SITE FOR RESIDUE OXY A 503
09AC9SOFTWAREGLU A:302 , LEU A:304 , LEU A:306 , GLN A:309 , HOH A:660 , HOH A:721 , ARG B:137 , ASP B:138 , HOH B:854BINDING SITE FOR RESIDUE GOL A 504
10BC1SOFTWAREASN E:245 , GLN E:249 , VAL E:250 , GLY E:252 , THR E:253 , ARG E:254 , ILE E:294 , MET E:296 , HIS E:353 , THR E:357 , ARG E:358 , PRO E:359 , ARG E:369 , PHE E:390 , PHE E:401 , VAL E:404 , GLN E:405 , LEU E:408 , OXY E:504 , HOH E:668 , HOH E:669 , HOH E:683BINDING SITE FOR RESIDUE HEM E 501
11BC2SOFTWAREARG E:137 , ASP E:138 , HOH E:722 , HOH E:741 , HOH E:949 , HOH E:950 , GLU G:302 , LEU G:304 , LEU G:306 , GLN G:309BINDING SITE FOR RESIDUE GOL E 502
12BC3SOFTWAREARG E:254 , ASN E:255 , LYS E:257 , GLU E:260 , ARG E:266 , HOH E:668 , HOH E:761 , HOH E:984BINDING SITE FOR RESIDUE GOL E 503
13BC4SOFTWAREASP E:251 , ARG E:369 , HEM E:501BINDING SITE FOR RESIDUE OXY E 504
14BC5SOFTWAREGLU E:302 , LEU E:304 , LEU E:306 , GLN E:309 , HOH E:625 , HOH E:820 , HOH E:973 , ARG G:137 , ASP G:138 , HOH G:655BINDING SITE FOR RESIDUE GOL E 505
15BC6SOFTWAREASN G:245 , GLN G:249 , VAL G:250 , GLY G:252 , THR G:253 , ARG G:254 , ILE G:294 , MET G:296 , HIS G:353 , THR G:357 , ARG G:358 , PRO G:359 , ARG G:369 , PHE G:390 , PHE G:401 , VAL G:404 , GLN G:405 , OXY G:502 , HOH G:637 , HOH G:958 , HOH G:1024BINDING SITE FOR RESIDUE HEM G 501
16BC7SOFTWAREASP G:251 , ARG G:369 , HEM G:501BINDING SITE FOR RESIDUE OXY G 502
17BC8SOFTWAREPRO G:234 , GLY G:235 , ALA G:236 , THR G:237 , PRO G:240 , HOH G:692 , HOH G:883 , HOH G:886 , HOH G:906BINDING SITE FOR RESIDUE GOL G 503

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4GT2)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 4GT2)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4GT2)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4GT2)

(-) Exons   (0, 0)

(no "Exon" information available for 4GT2)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:371
                                                                                                                                                                                                                                                                                                                                                                                                                   
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....hhhhhh..................eeeeeeeee....hhhhhhhhhhhhhhhhhhhhh....................eeeeeeehhhhhhh.hhhhhhhhhh..........hhhhh...eeeeeee.hhhhhhhhhhhhhhhh...eeeeeeeeee...............................hhhhhhh.....hhhhh..eeeeeeeeeehhhhhh..hhhhhhhhhh.....................................hhhhhhhhhhh.....ee..eeeeeee.....eeeeeeeeeee.hhhhhhhhhhhhhhhhhhhhh.eeeeeeeeeee..........hhhhhh. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4gt2 A  69 ATPLTSLGSERAMFHGKHQPGITTPMQARGHLVAFDLAAGAGRKEAAALLRRWSDTARRLMAGEPAGSRDTDVARDAGPSSLTVTFGFGHSFFGRTGLEEQRPVALDPLPDFSSDHLDKNRSNGDLWVQIGADDALVAFHALRAIQRDAGAAARVRWQMNGFNRSPGATAHPMTARNLMGQVDGTRNPKPGEADFDRRIFVPEEGPAWMANGSYVVVRRIRMLLDDWEELSLKAQEDVIGRRKSDGAPLSGGSGATESTEMDLEKTDGSGELVVPINAHARITRPDQNGGAAMVRRPFSYHDGFDADGVPDAGLLFVCWQADPLRGFVPVQRKLDRGDALSQFIRHEASGLFAVPGGAAEGEYVGQRLLEG 445
                                    78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238       248       258       268   ||  284       294       304       314       324       334       344       354       364       374       384       394       404       414       424       434       444 
                                                                                                                                                                                                                                     272|                                                                                                                                                                      
                                                                                                                                                                                                                                      279                                                                                                                                                                      


Chain B from PDB  Type:PROTEIN  Length:369
                                                                                                                                                                                                                                                                                                                                                                                                                 
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....hhhhhh..................eeeeeeeee....hhhhhhhhhhhhhhhhhhhhh....................eeeeeeehhhhhhh.hhhhhhhhhh..........hhhhh...eeeeeee.hhhhhhhhhhhhhhhhh..eeeeeeeeee...............................hhhhhhh...hhhhh..eeeeeeeeeehhhhhh..hhhhhhhhhh.....................................hhhhhhhhhhh.....ee..eeeeeee.....eeeeeeeeeee.hhhhhhhhhhhhhhhhh.hhh.eeeeeeeeeee..........hhhhhh. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4gt2 B  69 ATPLTSLGSERAMFHGKHQPGITTPMQARGHLVAFDLAAGAGRKEAAALLRRWSDTARRLMAGEPAGSRDTDVARDAGPSSLTVTFGFGHSFFGRTGLEEQRPVALDPLPDFSSDHLDKNRSNGDLWVQIGADDALVAFHALRAIQRDAGAAARVRWQMNGFNRSPGATAHPMTARNLMGQVDGTRNPKPGEADFDRRIFVPEPAWMANGSYVVVRRIRMLLDDWEELSLKAQEDVIGRRKSDGAPLSGGSGATESTEMDLEKTDGSGELVVPINAHARITRPDQNGGAAMVRRPFSYHDGFDADGVPDAGLLFVCWQADPLRGFVPVQRKLDRGDALSQFIRHEASGLFAVPGGAAEGEYVGQRLLEG 445
                                    78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238       248       258       268  ||   286       296       306       316       326       336       346       356       366       376       386       396       406       416       426       436         
                                                                                                                                                                                                                                    271|                                                                                                                                                                     
                                                                                                                                                                                                                                     280                                                                                                                                                                     


Chain E from PDB  Type:PROTEIN  Length:370
                                                                                                                                                                                                                                                                                                                                                                                                                  
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....hhhhhh..................eeeeeeeee....hhhhhhhhhhhhhhhhhhhhh....................eeeeeeehhhhhhhhhhhhhhhhhh..........hhhhh...eeeeeee.hhhhhhhhhhhhhhhhh..eeeeeeeeee............ee.....ee..........hhhhhhh....hhhhh..eeeeeeeeeehhhhhh..hhhhhhhhhh.....................................hhhhhhhhhhh.....ee..eeeeeee.....eeeeeeeeeee.hhhhhhhhhhhhhhhhhhhhh.eeeeeeeeeee..........hhhhhh. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4gt2 E  69 ATPLTSLGSERAMFHGKHQPGITTPMQARGHLVAFDLAAGAGRKEAAALLRRWSDTARRLMAGEPAGSRDTDVARDAGPSSLTVTFGFGHSFFGRTGLEEQRPVALDPLPDFSSDHLDKNRSNGDLWVQIGADDALVAFHALRAIQRDAGAAARVRWQMNGFNRSPGATAHPMTARNLMGQVDGTRNPKPGEADFDRRIFVPEEPAWMANGSYVVVRRIRMLLDDWEELSLKAQEDVIGRRKSDGAPLSGGSGATESTEMDLEKTDGSGELVVPINAHARITRPDQNGGAAMVRRPFSYHDGFDADGVPDAGLLFVCWQADPLRGFVPVQRKLDRGDALSQFIRHEASGLFAVPGGAAEGEYVGQRLLEG 445
                                    78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238       248       258       268   ||  285       295       305       315       325       335       345       355       365       375       385       395       405       415       425       435       445
                                                                                                                                                                                                                                     272|                                                                                                                                                                     
                                                                                                                                                                                                                                      280                                                                                                                                                                     


Chain G from PDB  Type:PROTEIN  Length:369
                                                                                                                                                                                                                                                                                                                                                                                                                 
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....hhhhhh..................eeeeeeeee....hhhhhhhhhhhhhhhhhhhhh....................eeeeeeehhhhhhh.hhhhhhhhhh..........hhhhh...eeeeeee.hhhhhhhhhhhhhhhhh..eeeeeeeeee...............................hhhhhhh...hhhhh..eeeeeeeeeehhhhhh..hhhhhhhhhh.....................................hhhhhhhhhhh.....ee..eeeeeee.....eeeeeeeeeee.hhhhhhhhhhhhhhhhh.hhh.eeeeeeeeeee..........hhhhhh. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4gt2 G  69 ATPLTSLGSERAMFHGKHQPGITTPMQARGHLVAFDLAAGAGRKEAAALLRRWSDTARRLMAGEPAGSRDTDVARDAGPSSLTVTFGFGHSFFGRTGLEEQRPVALDPLPDFSSDHLDKNRSNGDLWVQIGADDALVAFHALRAIQRDAGAAARVRWQMNGFNRSPGATAHPMTARNLMGQVDGTRNPKPGEADFDRRIFVPEPAWMANGSYVVVRRIRMLLDDWEELSLKAQEDVIGRRKSDGAPLSGGSGATESTEMDLEKTDGSGELVVPINAHARITRPDQNGGAAMVRRPFSYHDGFDADGVPDAGLLFVCWQADPLRGFVPVQRKLDRGDALSQFIRHEASGLFAVPGGAAEGEYVGQRLLEG 445
                                    78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238       248       258       268  ||   286       296       306       316       326       336       346       356       366       376       386       396       406       416       426       436         
                                                                                                                                                                                                                                    271|                                                                                                                                                                     
                                                                                                                                                                                                                                     280
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4GT2)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4GT2)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4GT2)

(-) Gene Ontology  (8, 8)

Asymmetric Unit(hide GO term definitions)

 Visualization

(-) Interactive Views

Asymmetric Unit
  Complete Structure
    Jena3D(integrated viewing of ligand, site, SAP, PROSITE, SCOP information)
    WebMol | AstexViewer[tm]@PDBe
(Java Applets, require no local installation except for Java; loading may be slow)
    STRAP
(Java WebStart application, automatic local installation, requires Java; full application with system access!)
    RasMol
(require local installation)
    Molscript (VRML)
(requires installation of a VRML viewer; select preferred view via VRML and generate a mono or stereo PDF format file)
 
  Ligands, Modified Residues, Ions
    ACT  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
    GOL  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
    HEM  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
    OXY  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
 
  Sites
    AC1  [ RasMol ]  +environment [ RasMol ]
    AC2  [ RasMol ]  +environment [ RasMol ]
    AC3  [ RasMol ]  +environment [ RasMol ]
    AC4  [ RasMol ]  +environment [ RasMol ]
    AC5  [ RasMol ]  +environment [ RasMol ]
    AC6  [ RasMol ]  +environment [ RasMol ]
    AC7  [ RasMol ]  +environment [ RasMol ]
    AC8  [ RasMol ]  +environment [ RasMol ]
    AC9  [ RasMol ]  +environment [ RasMol ]
    BC1  [ RasMol ]  +environment [ RasMol ]
    BC2  [ RasMol ]  +environment [ RasMol ]
    BC3  [ RasMol ]  +environment [ RasMol ]
    BC4  [ RasMol ]  +environment [ RasMol ]
    BC5  [ RasMol ]  +environment [ RasMol ]
    BC6  [ RasMol ]  +environment [ RasMol ]
    BC7  [ RasMol ]  +environment [ RasMol ]
    BC8  [ RasMol ]  +environment [ RasMol ]
 
  Cis Peptide Bonds
(no "Cis Peptide Bonds" information available for 4gt2)
 
Biological Units
  Complete Structure
    Biological Unit 1  [ Jena3D ]
    Biological Unit 2  [ Jena3D ]

(-) Still Images

Jmol
  protein: cartoon or spacefill or dots and stick; nucleic acid: cartoon and stick; ligands: spacefill; active site: stick
[ Asym. Unit PNG format | Asym. Unit - sites PNG format | Biol. Unit 1 PNG format | Biol. Unit 1 - sites PNG format | Biol. Unit 2 PNG format ](automatic orientation, automatically generated)
Molscript
  protein, nucleic acid: cartoon; ligands: spacefill; active site: ball and stick
[ mono PDF format | stereo PDF format ](default orientation, automatically generated)

 Databases and Analysis Tools

(-) Databases

Access by PDB/NDB ID
  4gt2
    Family and Domain Information: ProDom | SYSTERS
    General Structural Information: GlycoscienceDB | MMDB | NDB | OCA | PDB | PDBe | PDBj | PDBsum | PDBWiki | PQS | PROTEOPEDIA
    Orientation in Membranes: OPM
    Protein Surface: SURFACE
    Secondary Structure: DSSP (structure derived) | HSSP (homology derived)
    Structural Genomics: GeneCensus
    Structural Neighbours: CE | VAST
    Structure Classification: CATH | Dali | SCOP
    Validation and Original Data: BMRB Data View | BMRB Restraints Grid | EDS | PROCHECK | RECOORD | WHAT_CHECK
 
Access by UniProt ID/Accession number
  Q9ZBW9_STRCO | Q9ZBW9
    Comparative Protein Structure Models: ModBase
    Genomic Information: Ensembl
    Protein-protein Interaction: DIP
    Sequence, Family and Domain Information: InterPro | Pfam | SMART | UniProtKB/TrEMBL
 
Access by Enzyme Classificator   (EC Number)
  1.11.1.19
    General Enzyme Information: BRENDA | EC-PDB | Enzyme | IntEnz
    Pathway: KEGG | MetaCyc
 
Access by Disease Identifier   (MIM ID)
  (no 'MIM ID' available)
    Disease Information: OMIM
 
Access by GenAge ID
  (no 'GenAge ID' available)
    Age Related Information: GenAge

(-) Analysis Tools

Access by PDB/NDB ID
    Domain Information: XDom
    Interatomic Contacts of Structural Units: CSU
    Ligand-protein Contacts: LPC
    Protein Cavities: castP
    Sequence and Secondary Structure: PDBCartoon
    Structure Alignment: STRAP(Java WebStart application, automatic local installation, requires Java; full application with system access!)
    Structure and Sequence Browser: STING
 
Access by UniProt ID/Accession number
  Q9ZBW9_STRCO | Q9ZBW9
    Protein Disorder Prediction: DisEMBL | FoldIndex | GLOBPLOT (for more information see DisProt)

 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

(no "Entries Sharing at Least One Protein Chain" available for 4GT2)

(-) Related Entries Specified in the PDB File

4grc 4gs1 4gu7