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(-) Description

Title :  PROTELOMERASE TELA MUTANT R255A COMPLEXED WITH CAAG HAIRPIN DNA
 
Authors :  K. Shi, H. Aihara
Date :  10 May 12  (Deposition) - 13 Jun 12  (Release) - 29 Aug 12  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.35
Chains :  Asym./Biol. Unit :  A,C
Keywords :  Recombination-Dna Complex (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  W. M. Huang, J. Dagloria, H. Fox, Q. Ruan, J. Tillou, K. Shi, H. Aihara, J. Aron, S. Casjens
Linear Chromosome-Generating System Of Agrobacterium Tumefaciens C58: Protelomerase Generates And Protects Hairpin Ends.
J. Biol. Chem. V. 287 25551 2012
PubMed-ID: 22582388  |  Reference-DOI: 10.1074/JBC.M112.369488

(-) Compounds

Molecule 1 - PROTELOMERASE
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Fragment: UNP RESIDUES 102-421
    Gene: TELA, ATU2523
    Mutation: YES
    Organism Scientific: AGROBACTERIUM TUMEFACIENS
    Organism Taxid: 176299
    Strain: C58/ATCC 33970
 
Molecule 2 - DNA HAIRPIN
    Chains: C
    Engineered: YES
    Synthetic: YES

 Structural Features

(-) Chains, Units

  12
Asymmetric/Biological Unit : AC

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 4F43)

(-) Sites  (0, 0)

(no "Site" information available for 4F43)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4F43)

(-) Cis Peptide Bonds  (1, 1)

Asymmetric/Biological Unit
No.Residues
1Asn A:282 -Gly A:283

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4F43)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4F43)

(-) Exons   (0, 0)

(no "Exon" information available for 4F43)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:320
                                                                                                                                                                                                                                                                                                                                                                
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .......hhhhhhhhhhhh.......hhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhh....hhhhhh..hhhhhhhhhhhhhhhhhhhhh..ee..hhhhhhhhhhhhh...hhhhhhhhhhhhhh.hhhhhhhh...eeeee..eeeeeeeee.................eeee...hhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhh............hhhhhhhhhhhhhhhh....hhhhhhhhhhh......hhhhhhh.eehhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4f43 A 102 DYPKTGVATSIVEKIERAEFNTAGRKPTVLLRIADFIAAMNGMDAKQDMQALWDAEIAIMNGRAQTTIISYITKYRNAIREAFGDDHPMLKIATGDAAMYDEARRVKMEKIANKHGALITFENYRQVLKICEDCLKSSDPLMIGIGLIGMTGRAPYEVFTQAEFSPAPYGKGVSKWSILFNGQAKTKQGEGTKFGITYEIPVLTRSETVLAAYKRLRESGQGKLWHGMSIDDFSSETRLLLRDTVFNLFEDVWPKEELPKPYGLRHLYAEVAYHNFAPPHVTKNSYFAAILGHNNNDLETSLSYMTYTLPEDRDNALARL 421
                                   111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421


Chain C from PDB  Type:DNA  Length:32
                                                                
                 4f43 C   1 CATAATAACAATATCAAGATATTGTTATTATG  32
                                    10        20        30
   Legend:   → Mismatch (orange background)
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  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4F43)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4F43)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4F43)

(-) Gene Ontology  (0, 0)

Asymmetric/Biological Unit(hide GO term definitions)
    (no "Gene Ontology" information available for 4F43)

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  Sites
(no "Sites" information available for 4f43)
 
  Cis Peptide Bonds
    Asn A:282 - Gly A:283   [ RasMol ]  
 

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  4f43
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  Q7CWV1_AGRFC | Q7CWV1
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/TrEMBL
        Q7CWV1_AGRFC | Q7CWV1: 4dwp 4e0g 4e0j 4e0p 4e0y 4e0z 4e10 4f41

(-) Related Entries Specified in the PDB File

4f41