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(-) Description

Title :  CRYSTAL STRUCTURE OF THE ARSENITE OXIDASE PROTEIN COMPLEX FROM RHIZOBIUM SPECIES STRAIN NT-26
 
Authors :  M. Oke, J. M. Santini, J. H. Naismith
Date :  05 Dec 11  (Deposition) - 12 Dec 12  (Release) - 12 Mar 14  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.70
Chains :  Asym. Unit :  A,B,C,D,E,F,G,H
Biol. Unit 1:  C,D,E,F  (1x)
Biol. Unit 2:  A (1x),B (1x),G (1x),H (1x)
Biol. Unit 3:  A (1x),B (1x),G (1x),H (1x)
Keywords :  Oxidoreductase, Rieske, Iron Sulfur, Molybdopterin (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  T. P. Warelow, M. Oke, B. Schoepp-Cothenet, J. U. Dahl, N. Bruselat, G. N. Sivalingam, S. Leimkuhler, K. Thalassinos, U. Kappler, J. H. Naismith, J. M. Santini
The Respiratory Arsenite Oxidase: Structure And The Role Of Residues Surrounding The Rieske Cluster.
Plos One V. 8 72535 2013
PubMed-ID: 24023621  |  Reference-DOI: 10.1371/JOURNAL.PONE.0072535

(-) Compounds

Molecule 1 - AROA
    Chains: A, C, E, G
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PPROEX
    Expression System Strain: BL21(DE3)
    Expression System Taxid: 469008
    Organism Scientific: ARSENITE-OXIDISING BACTERIUM NT-26
    Organism Taxid: 97708
    Synonym: ARSENITE OXIDASE SUBUNIT A
 
Molecule 2 - AROB
    Chains: B, D, F, H
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PPROEX
    Expression System Strain: BL21(DE3)
    Expression System Taxid: 469008
    Organism Scientific: ARSENITE-OXIDISING BACTERIUM NT-26
    Organism Taxid: 97708
    Synonym: ARSENITE OXIDASE SUBUNIT B

 Structural Features

(-) Chains, Units

  12345678
Asymmetric Unit : ABCDEFGH
Biological Unit 1 (1x):   CDEF  
Biological Unit 2 (1x): A (1x)B (1x)    G (1x)H (1x)
Biological Unit 3 (1x): A (1x)B (1x)    G (1x)H (1x)

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (5, 24)

Asymmetric Unit (5, 24)
No.NameCountTypeFull Name
14MO4Ligand/IonMOLYBDENUM(IV) ION
2F3S4Ligand/IonFE3-S4 CLUSTER
3FES4Ligand/IonFE2/S2 (INORGANIC) CLUSTER
4MGD8Ligand/Ion2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE
5O4Ligand/IonOXYGEN ATOM
Biological Unit 1 (4, 10)
No.NameCountTypeFull Name
14MO2Ligand/IonMOLYBDENUM(IV) ION
2F3S2Ligand/IonFE3-S4 CLUSTER
3FES2Ligand/IonFE2/S2 (INORGANIC) CLUSTER
4MGD4Ligand/Ion2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE
5O-1Ligand/IonOXYGEN ATOM
Biological Unit 2 (4, 5)
No.NameCountTypeFull Name
14MO1Ligand/IonMOLYBDENUM(IV) ION
2F3S1Ligand/IonFE3-S4 CLUSTER
3FES1Ligand/IonFE2/S2 (INORGANIC) CLUSTER
4MGD2Ligand/Ion2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE
5O-1Ligand/IonOXYGEN ATOM
Biological Unit 3 (4, 5)
No.NameCountTypeFull Name
14MO1Ligand/IonMOLYBDENUM(IV) ION
2F3S1Ligand/IonFE3-S4 CLUSTER
3FES1Ligand/IonFE2/S2 (INORGANIC) CLUSTER
4MGD2Ligand/Ion2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE
5O-1Ligand/IonOXYGEN ATOM

(-) Sites  (24, 24)

Asymmetric Unit (24, 24)
No.NameEvidenceResiduesDescription
01AC1SOFTWAREGLY A:174 , HIS A:199 , ASN A:200 , LYS A:413 , TRP A:417 , GLY A:486 , CYS A:487 , ASP A:488 , THR A:492 , VAL A:543 , ASP A:544 , ILE A:545 , ILE A:546 , THR A:548 , ALA A:560 , ALA A:561 , THR A:562 , ASP A:593 , ASN A:718 , ARG A:720 , GLN A:726 , SER A:727 , TYR A:729 , PHE A:792 , GLN A:799 , TYR A:815 , LYS A:816 , MGD A:2002 , O A:2003 , 4MO A:2004BINDING SITE FOR RESIDUE MGD A2001
02AC2SOFTWAREARG A:104 , GLY A:236 , THR A:237 , ASN A:238 , GLU A:241 , THR A:242 , GLN A:243 , VAL A:280 , ASP A:281 , PRO A:282 , ARG A:283 , THR A:285 , GLY A:308 , ASP A:310 , GLU A:412 , LYS A:413 , GLY A:414 , GLY A:449 , GLY A:450 , HIS A:451 , ASN A:717 , GLY A:719 , ARG A:720 , ALA A:721 , ASN A:722 , VAL A:724 , TRP A:725 , GLN A:726 , LYS A:816 , GLN A:817 , MGD A:2001 , O A:2003 , 4MO A:2004BINDING SITE FOR RESIDUE MGD A2002
03AC3SOFTWAREASN A:200 , GLU A:207 , LYS A:413 , MGD A:2001 , MGD A:2002 , 4MO A:2004BINDING SITE FOR RESIDUE O A2003
04AC4SOFTWARELYS A:413 , ARG A:720 , MGD A:2001 , MGD A:2002 , O A:2003BINDING SITE FOR RESIDUE 4MO A2004
05AC5SOFTWARECYS A:24 , CYS A:27 , GLY A:30 , CYS A:31 , TYR A:33 , SER A:102 , ARG A:104 , GLY A:105 , ASN A:245BINDING SITE FOR RESIDUE F3S A2005
06AC6SOFTWARECYS B:103 , HIS B:105 , LYS B:106 , CYS B:121 , HIS B:124 , SER B:126BINDING SITE FOR RESIDUE FES B2006
07AC7SOFTWAREGLY C:174 , HIS C:199 , ASN C:200 , LYS C:413 , TRP C:417 , GLY C:486 , CYS C:487 , ASP C:488 , THR C:492 , VAL C:543 , ASP C:544 , ILE C:545 , ILE C:546 , THR C:548 , ALA C:560 , ALA C:561 , THR C:562 , ASP C:593 , ASN C:718 , ARG C:720 , GLN C:726 , SER C:727 , TYR C:729 , PHE C:792 , GLN C:799 , TYR C:815 , LYS C:816 , MGD C:2002 , O C:2003 , 4MO C:2004BINDING SITE FOR RESIDUE MGD C2001
08AC8SOFTWAREARG C:104 , GLY C:236 , THR C:237 , ASN C:238 , GLU C:241 , THR C:242 , GLN C:243 , VAL C:280 , ASP C:281 , PRO C:282 , ARG C:283 , THR C:285 , GLY C:308 , ASP C:310 , GLU C:412 , LYS C:413 , GLY C:414 , GLY C:449 , GLY C:450 , HIS C:451 , ASN C:717 , GLY C:719 , ARG C:720 , ALA C:721 , ASN C:722 , VAL C:724 , TRP C:725 , GLN C:726 , LYS C:816 , GLN C:817 , MGD C:2001 , O C:2003 , 4MO C:2004BINDING SITE FOR RESIDUE MGD C2002
09AC9SOFTWAREASN C:200 , GLU C:207 , LYS C:413 , MGD C:2001 , MGD C:2002 , 4MO C:2004BINDING SITE FOR RESIDUE O C2003
10BC1SOFTWARELYS C:413 , ARG C:720 , MGD C:2001 , MGD C:2002 , O C:2003BINDING SITE FOR RESIDUE 4MO C2004
11BC2SOFTWARECYS C:24 , CYS C:27 , GLY C:30 , CYS C:31 , TYR C:33 , SER C:102 , ARG C:104 , ASN C:245BINDING SITE FOR RESIDUE F3S C2005
12BC3SOFTWARECYS D:103 , HIS D:105 , LYS D:106 , CYS D:121 , HIS D:124 , SER D:126BINDING SITE FOR RESIDUE FES D2006
13BC4SOFTWAREGLY E:174 , HIS E:199 , ASN E:200 , LYS E:413 , TRP E:417 , GLY E:486 , CYS E:487 , ASP E:488 , THR E:492 , VAL E:543 , ASP E:544 , ILE E:545 , ILE E:546 , THR E:548 , ALA E:560 , ALA E:561 , THR E:562 , ASP E:593 , ASN E:718 , ARG E:720 , GLN E:726 , SER E:727 , TYR E:729 , PHE E:792 , GLN E:799 , TYR E:815 , LYS E:816 , MGD E:2002 , O E:2003 , 4MO E:2004BINDING SITE FOR RESIDUE MGD E2001
14BC5SOFTWAREARG E:104 , GLY E:236 , THR E:237 , ASN E:238 , GLU E:241 , THR E:242 , GLN E:243 , VAL E:280 , ASP E:281 , PRO E:282 , ARG E:283 , THR E:285 , GLY E:308 , ASP E:310 , GLU E:412 , LYS E:413 , GLY E:414 , GLY E:449 , GLY E:450 , HIS E:451 , ASN E:717 , GLY E:719 , ARG E:720 , ALA E:721 , ASN E:722 , VAL E:724 , TRP E:725 , GLN E:726 , LYS E:816 , GLN E:817 , MGD E:2001 , O E:2003 , 4MO E:2004BINDING SITE FOR RESIDUE MGD E2002
15BC6SOFTWAREHIS E:199 , ASN E:200 , HIS E:451 , MGD E:2001 , MGD E:2002 , 4MO E:2004BINDING SITE FOR RESIDUE O E2003
16BC7SOFTWARELYS E:413 , ARG E:720 , MGD E:2001 , MGD E:2002 , O E:2003BINDING SITE FOR RESIDUE 4MO E2004
17BC8SOFTWARECYS E:24 , CYS E:27 , GLY E:30 , CYS E:31 , TYR E:33 , SER E:102 , ARG E:104 , GLY E:105 , ASN E:245BINDING SITE FOR RESIDUE F3S E2005
18BC9SOFTWARECYS F:103 , HIS F:105 , LYS F:106 , CYS F:121 , HIS F:124 , SER F:126BINDING SITE FOR RESIDUE FES F2006
19CC1SOFTWAREGLY G:174 , HIS G:199 , ASN G:200 , LYS G:413 , TRP G:417 , GLY G:486 , CYS G:487 , ASP G:488 , THR G:492 , VAL G:543 , ASP G:544 , ILE G:545 , THR G:548 , ALA G:560 , ALA G:561 , THR G:562 , ASP G:593 , ASN G:718 , ARG G:720 , GLN G:726 , SER G:727 , TYR G:729 , PHE G:792 , GLN G:799 , TYR G:815 , LYS G:816 , MGD G:2002 , O G:2003 , 4MO G:2004BINDING SITE FOR RESIDUE MGD G2001
20CC2SOFTWAREARG G:104 , GLY G:236 , THR G:237 , ASN G:238 , GLU G:241 , THR G:242 , GLN G:243 , VAL G:280 , ASP G:281 , PRO G:282 , ARG G:283 , THR G:285 , GLY G:308 , ASP G:310 , GLU G:412 , LYS G:413 , GLY G:414 , GLY G:449 , GLY G:450 , HIS G:451 , ASN G:717 , GLY G:719 , ARG G:720 , ALA G:721 , ASN G:722 , VAL G:724 , TRP G:725 , GLN G:726 , LYS G:816 , GLN G:817 , MGD G:2001 , O G:2003 , 4MO G:2004BINDING SITE FOR RESIDUE MGD G2002
21CC3SOFTWAREASN G:200 , LYS G:413 , MGD G:2001 , MGD G:2002 , 4MO G:2004BINDING SITE FOR RESIDUE O G2003
22CC4SOFTWARELYS G:413 , ARG G:720 , MGD G:2001 , MGD G:2002 , O G:2003BINDING SITE FOR RESIDUE 4MO G2004
23CC5SOFTWARECYS G:24 , CYS G:27 , GLY G:30 , CYS G:31 , TYR G:33 , SER G:102 , ARG G:104 , GLY G:105 , ASN G:245BINDING SITE FOR RESIDUE F3S G2005
24CC6SOFTWARECYS H:103 , HIS H:105 , LYS H:106 , CYS H:121 , HIS H:124 , SER H:126BINDING SITE FOR RESIDUE FES H2006

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4AAY)

(-) Cis Peptide Bonds  (16, 16)

Asymmetric Unit
No.Residues
1Tyr A:347 -Pro A:348
2Arg A:465 -Pro A:466
3Glu A:661 -Pro A:662
4Tyr B:70 -Pro B:71
5Tyr C:347 -Pro C:348
6Arg C:465 -Pro C:466
7Glu C:661 -Pro C:662
8Tyr D:70 -Pro D:71
9Tyr E:347 -Pro E:348
10Arg E:465 -Pro E:466
11Glu E:661 -Pro E:662
12Tyr F:70 -Pro F:71
13Tyr G:347 -Pro G:348
14Arg G:465 -Pro G:466
15Glu G:661 -Pro G:662
16Tyr H:70 -Pro H:71

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4AAY)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4AAY)

(-) Exons   (0, 0)

(no "Exon" information available for 4AAY)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:843
 aligned with Q6VAL8_9RHIZ | Q6VAL8 from UniProtKB/TrEMBL  Length:845

    Alignment length:843
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441       451       461       471       481       491       501       511       521       531       541       551       561       571       581       591       601       611       621       631       641       651       661       671       681       691       701       711       721       731       741       751       761       771       781       791       801       811       821       831       841   
         Q6VAL8_9RHIZ     2 AFKRHIDRLPIIPADAKKHNVTCHFCIVGCGYHAYTWPINKQGGTDPQNNIFGVDLSEQQQAESDAWYSPSMYNVVKQDGRDVHVVIKPDHECVVNSGLGSVRGARMAETSFSEARNTQQQRLTDPLVWRYGQMQPTSWDDALDLVARVTAKIVKEKGEDALIVSAFDHGGAGGGYENTWGTGKLYFEAMKVKNIRIHNRPAYNSEVHGTRDMGVGELNNCYEDAELADTIVAVGTNALETQTNYFLNHWIPNLRGESLGKKKELMPEEPHEAGRIIIVDPRRTVTVNACEQTAGADNVLHLAINSGTDLALFNALFTYIADKGWVDRDFIDKSTLREGTARPPLYPARGVSEANPGHLSSFEDAVEGCRMSIEEAAEITGLDAAQIIKAAEWIGMPKEGGKRRRVMFGYEKGLIWGNDNYRTNGALVNLALATGNIGRPGGGVVRLGGHQEGYVRPSDAHVGRPAAYVDQLLIGGQGGVHHIWGCDHYKTTLNAHEFKRVYKKRTDMVKDAMSAAPYGDREAMVNAIVDAINQGGLFAVNVDIIPTKIGEACHVILPAATSGEMNLTSMNGERRMRLTERYMDPPGQSMPDCLIAARLANTMERVLTEMGDVGYAAQFKGFDWQTEEDAFMDGYNKNAHGGEFVTYERLSAMGTNGFQEPATGFTDGKIEGTQRLYTDGVFSTDDGKARFMDAPWRGLQAPGKQQQKDSHKYLINNGRANVVWQSAYLDQENDFVMDRFPYPFIEMNPEDMAEAGLKEGDLVEIYNDAGATQAMAYPTPTARRGETFMLFGFPTGVQGNVTSAGTNELIIPNYKQTWGNIRKISDAPRNVAHLSFKSKEYQS 844
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ................eeeeee........eeeeeeee.......hhhhh..................hhh.eeeeee..eeeeeeeee.............hhhhh...................eeee..eeee.hhhhhhhhhhhhhhhhhhhhh...eeeee........hhhhhhhhhhhhhh......eee.........hhhhhhh........hhhhhhh.eeeee..hhhhhhhhhhhhhhhhhhh..hhhhhhhhh........eeeee....hhhhhhhhhhhh...eeee.....hhhhhhhhhhhhhhhhh..hhhhhhhhh......................eeehhhhhhhhhh.hhhhhhhhhh.hhhhhhhhhhhhhh.........eeeeehhhhhh..hhhhhhhhhhhhhhhh.........eee............hhhhh....hhhhhhhh....eeeee..hhhhhh.hhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhh...eeeeee....hhhhhh.eeeeee......eeee....eeeee..........eehhhhhhhhhhhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhee....eee..eee...................eee.........hhhhhhhh..eeeeee..........hhhhhhhhhhhh...eeeehhhhhhhhh.....eeeee....eeeeeeee.......eeeee......hhhhhh...............eeeeeeee..hhhhh........... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4aay A   2 AFKRHIDRLPIIPADAKKHNVTCHFCIVGCGYHAYTWPINKQGGTDPQNNIFGVDLSEQQQAESDAWYSPSMYNVVKQDGRDVHVVIKPDHECVVNSGLGSVRGARMAETSFSEARNTQQQRLTDPLVWRYGQMQPTSWDDALDLVARVTAKIVKEKGEDALIVSAFDHGGAGGGYENTWGTGKLYFEAMKVKNIRIHNRPAYNSEVHGTRDMGVGELNNCYEDAELADTIVAVGTNALETQTNYFLNHWIPNLRGESLGKKKELMPEEPHEAGRIIIVDPRRTVTVNACEQTAGADNVLHLAINSGTDLALFNALFTYIADKGWVDRDFIDKSTLREGTARPPLYPARGVSEANPGHLSSFEDAVEGCRMSIEEAAEITGLDAAQIIKAAEWIGMPKEGGKRRRVMFGYEKGLIWGNDNYRTNGALVNLALATGNIGRPGGGVVRLGGHQEGYVRPSDAHVGRPAAYVDQLLIGGQGGVHHIWGCDHYKTTLNAHEFKRVYKKRTDMVKDAMSAAPYGDREAMVNAIVDAINQGGLFAVNVDIIPTKIGEACHVILPAATSGEMNLTSMNGERRMRLTERYMDPPGQSMPDCLIAARLANTMERVLTEMGDVGYAAQFKGFDWQTEEDAFMDGYNKNAHGGEFVTYERLSAMGTNGFQEPATGFTDGKIEGTQRLYTDGVFSTDDGKARFMDAPWRGLQAPGKQQQKDSHKYLINNGRANVVWQSAYLDQENDFVMDRFPYPFIEMNPEDMAEAGLKEGDLVEIYNDAGATQAMAYPTPTARRGETFMLFGFPTGVQGNVTSAGTNELIIPNYKQTWGNIRKISDAPRNVAHLSFKSKEYQS 844
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441       451       461       471       481       491       501       511       521       531       541       551       561       571       581       591       601       611       621       631       641       651       661       671       681       691       701       711       721       731       741       751       761       771       781       791       801       811       821       831       841   


Chain B from PDB  Type:PROTEIN  Length:132
 aligned with Q6VAL9_9RHIZ | Q6VAL9 from UniProtKB/TrEMBL  Length:175

    Alignment length:132
                                    53        63        73        83        93       103       113       123       133       143       153       163       173  
         Q6VAL9_9RHIZ    44 AAGVEYPANRLANISELTLNEPLDVAYPDEDAAGVLLKLGTRVEGGVGPDGDIVGFSTICPHKGFPLSYSADNKTFNCPGHFSVFDPEKGGQQVWGQATQNLPQYVLRVADNGDIFAEGVDELIYGRLSNVL 175
               SCOP domains d4aayb_ B: automated matches                                                                                                         SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ........eeeee.hhh.....eeee......eeeeee..............eeeee..........eee....eee......ee.hhhh..eee.........eeeee....eeeeeee............ Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 4aay B  44 AAGVEYPANRLANISELTLNEPLDVAYPDEDAAGVLLKLGTRVEGGVGPDGDIVGFSTICPHKGFPLSYSADNKTFNCPGHFSVFDPEKGGQQVWGQATQNLPQYVLRVADNGDIFAEGVDELIYGRLSNVL 175
                                    53        63        73        83        93       103       113       123       133       143       153       163       173  


Chain C from PDB  Type:PROTEIN  Length:843
 aligned with Q6VAL8_9RHIZ | Q6VAL8 from UniProtKB/TrEMBL  Length:845

    Alignment length:843
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441       451       461       471       481       491       501       511       521       531       541       551       561       571       581       591       601       611       621       631       641       651       661       671       681       691       701       711       721       731       741       751       761       771       781       791       801       811       821       831       841   
         Q6VAL8_9RHIZ     2 AFKRHIDRLPIIPADAKKHNVTCHFCIVGCGYHAYTWPINKQGGTDPQNNIFGVDLSEQQQAESDAWYSPSMYNVVKQDGRDVHVVIKPDHECVVNSGLGSVRGARMAETSFSEARNTQQQRLTDPLVWRYGQMQPTSWDDALDLVARVTAKIVKEKGEDALIVSAFDHGGAGGGYENTWGTGKLYFEAMKVKNIRIHNRPAYNSEVHGTRDMGVGELNNCYEDAELADTIVAVGTNALETQTNYFLNHWIPNLRGESLGKKKELMPEEPHEAGRIIIVDPRRTVTVNACEQTAGADNVLHLAINSGTDLALFNALFTYIADKGWVDRDFIDKSTLREGTARPPLYPARGVSEANPGHLSSFEDAVEGCRMSIEEAAEITGLDAAQIIKAAEWIGMPKEGGKRRRVMFGYEKGLIWGNDNYRTNGALVNLALATGNIGRPGGGVVRLGGHQEGYVRPSDAHVGRPAAYVDQLLIGGQGGVHHIWGCDHYKTTLNAHEFKRVYKKRTDMVKDAMSAAPYGDREAMVNAIVDAINQGGLFAVNVDIIPTKIGEACHVILPAATSGEMNLTSMNGERRMRLTERYMDPPGQSMPDCLIAARLANTMERVLTEMGDVGYAAQFKGFDWQTEEDAFMDGYNKNAHGGEFVTYERLSAMGTNGFQEPATGFTDGKIEGTQRLYTDGVFSTDDGKARFMDAPWRGLQAPGKQQQKDSHKYLINNGRANVVWQSAYLDQENDFVMDRFPYPFIEMNPEDMAEAGLKEGDLVEIYNDAGATQAMAYPTPTARRGETFMLFGFPTGVQGNVTSAGTNELIIPNYKQTWGNIRKISDAPRNVAHLSFKSKEYQS 844
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ................eeeeee........eeeeeeee.......hhhhh..................hhh.eeeeee..eeeeeeeee.............hhhhh...................eeee..eeee.hhhhhhhhhhhhhhhhhhhhh...eeeee........hhhhhhhhhhhhhh......eee.........hhhhhhh........hhhhhhh.eeeee..hhhhhhhhhhhhhhhhhhh..hhhhhhhhh........eeeee....hhhhhhhhhhhh...eeee.....hhhhhhhhhhhhhhhhh..hhhhhhhhh......................eeehhhhhhhhhh.hhhhhhhhhh.hhhhhhhhhhhhhh.........eeeeehhhhhh..hhhhhhhhhhhhhhhh.........eee............hhhhh....hhhhhhhh....eeeee..hhhhhh.hhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhh...eeeeee....hhhhhh.eeeeee......eeee....eeeee..........eehhhhhhhhhhhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhee....eee..eee...................eee.........hhhhhhhh..eeeeee..........hhhhhhhhhhhh...eeeehhhhhhhh......eeeee....eeeeeeee.......eeeee......hhhhhh...............eeeeeeee..hhhhh........... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4aay C   2 AFKRHIDRLPIIPADAKKHNVTCHFCIVGCGYHAYTWPINKQGGTDPQNNIFGVDLSEQQQAESDAWYSPSMYNVVKQDGRDVHVVIKPDHECVVNSGLGSVRGARMAETSFSEARNTQQQRLTDPLVWRYGQMQPTSWDDALDLVARVTAKIVKEKGEDALIVSAFDHGGAGGGYENTWGTGKLYFEAMKVKNIRIHNRPAYNSEVHGTRDMGVGELNNCYEDAELADTIVAVGTNALETQTNYFLNHWIPNLRGESLGKKKELMPEEPHEAGRIIIVDPRRTVTVNACEQTAGADNVLHLAINSGTDLALFNALFTYIADKGWVDRDFIDKSTLREGTARPPLYPARGVSEANPGHLSSFEDAVEGCRMSIEEAAEITGLDAAQIIKAAEWIGMPKEGGKRRRVMFGYEKGLIWGNDNYRTNGALVNLALATGNIGRPGGGVVRLGGHQEGYVRPSDAHVGRPAAYVDQLLIGGQGGVHHIWGCDHYKTTLNAHEFKRVYKKRTDMVKDAMSAAPYGDREAMVNAIVDAINQGGLFAVNVDIIPTKIGEACHVILPAATSGEMNLTSMNGERRMRLTERYMDPPGQSMPDCLIAARLANTMERVLTEMGDVGYAAQFKGFDWQTEEDAFMDGYNKNAHGGEFVTYERLSAMGTNGFQEPATGFTDGKIEGTQRLYTDGVFSTDDGKARFMDAPWRGLQAPGKQQQKDSHKYLINNGRANVVWQSAYLDQENDFVMDRFPYPFIEMNPEDMAEAGLKEGDLVEIYNDAGATQAMAYPTPTARRGETFMLFGFPTGVQGNVTSAGTNELIIPNYKQTWGNIRKISDAPRNVAHLSFKSKEYQS 844
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441       451       461       471       481       491       501       511       521       531       541       551       561       571       581       591       601       611       621       631       641       651       661       671       681       691       701       711       721       731       741       751       761       771       781       791       801       811       821       831       841   


Chain D from PDB  Type:PROTEIN  Length:132
 aligned with Q6VAL9_9RHIZ | Q6VAL9 from UniProtKB/TrEMBL  Length:175

    Alignment length:132
                                    53        63        73        83        93       103       113       123       133       143       153       163       173  
         Q6VAL9_9RHIZ    44 AAGVEYPANRLANISELTLNEPLDVAYPDEDAAGVLLKLGTRVEGGVGPDGDIVGFSTICPHKGFPLSYSADNKTFNCPGHFSVFDPEKGGQQVWGQATQNLPQYVLRVADNGDIFAEGVDELIYGRLSNVL 175
               SCOP domains d4aayd_ D: automated matches                                                                                                         SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ........eeeee.hhh.....eeee......eeeeee..............eeeee..........eee....eee......ee.hhhh..eee.........eeeee....eeeeeee............ Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 4aay D  44 AAGVEYPANRLANISELTLNEPLDVAYPDEDAAGVLLKLGTRVEGGVGPDGDIVGFSTICPHKGFPLSYSADNKTFNCPGHFSVFDPEKGGQQVWGQATQNLPQYVLRVADNGDIFAEGVDELIYGRLSNVL 175
                                    53        63        73        83        93       103       113       123       133       143       153       163       173  


Chain E from PDB  Type:PROTEIN  Length:843
 aligned with Q6VAL8_9RHIZ | Q6VAL8 from UniProtKB/TrEMBL  Length:845

    Alignment length:843
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441       451       461       471       481       491       501       511       521       531       541       551       561       571       581       591       601       611       621       631       641       651       661       671       681       691       701       711       721       731       741       751       761       771       781       791       801       811       821       831       841   
         Q6VAL8_9RHIZ     2 AFKRHIDRLPIIPADAKKHNVTCHFCIVGCGYHAYTWPINKQGGTDPQNNIFGVDLSEQQQAESDAWYSPSMYNVVKQDGRDVHVVIKPDHECVVNSGLGSVRGARMAETSFSEARNTQQQRLTDPLVWRYGQMQPTSWDDALDLVARVTAKIVKEKGEDALIVSAFDHGGAGGGYENTWGTGKLYFEAMKVKNIRIHNRPAYNSEVHGTRDMGVGELNNCYEDAELADTIVAVGTNALETQTNYFLNHWIPNLRGESLGKKKELMPEEPHEAGRIIIVDPRRTVTVNACEQTAGADNVLHLAINSGTDLALFNALFTYIADKGWVDRDFIDKSTLREGTARPPLYPARGVSEANPGHLSSFEDAVEGCRMSIEEAAEITGLDAAQIIKAAEWIGMPKEGGKRRRVMFGYEKGLIWGNDNYRTNGALVNLALATGNIGRPGGGVVRLGGHQEGYVRPSDAHVGRPAAYVDQLLIGGQGGVHHIWGCDHYKTTLNAHEFKRVYKKRTDMVKDAMSAAPYGDREAMVNAIVDAINQGGLFAVNVDIIPTKIGEACHVILPAATSGEMNLTSMNGERRMRLTERYMDPPGQSMPDCLIAARLANTMERVLTEMGDVGYAAQFKGFDWQTEEDAFMDGYNKNAHGGEFVTYERLSAMGTNGFQEPATGFTDGKIEGTQRLYTDGVFSTDDGKARFMDAPWRGLQAPGKQQQKDSHKYLINNGRANVVWQSAYLDQENDFVMDRFPYPFIEMNPEDMAEAGLKEGDLVEIYNDAGATQAMAYPTPTARRGETFMLFGFPTGVQGNVTSAGTNELIIPNYKQTWGNIRKISDAPRNVAHLSFKSKEYQS 844
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ................eeeeee........eeeeeeee.......hhhhh..................hhh.eeeeee..eeeeeeeee.............hhhhh...................eeee..eeee.hhhhhhhhhhhhhhhhhhhhh...eeeee........hhhhhhhhhhhhhh......eee.........hhhhhhh........hhhhhhh.eeeee..hhhhhhhhhhhhhhhhhhh..hhhhhhhhh........eeeee....hhhhhhhhhhhh...eeee.....hhhhhhhhhhhhhhhhh..hhhhhhhhh......................eeehhhhhhhhhh.hhhhhhhhhh.hhhhhhhhhhhhhh.........eeeeehhhhhh..hhhhhhhhhhhhhhhh.........eee............hhhhh....hhhhhhhh....eeeee..hhhhhh.hhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhh...eeeeee....hhhhhh.eeeeee......eeee....eeeee..........eehhhhhhhhhhhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhee....eee..eee...................eee.........hhhhhhhhh.eeeeee..........hhhhhhhhhhhh...eeeehhhhhhhh......eeeee....eeeeeeee.......eeeee......hhhhhh...............eeeeeeee..hhhhh........... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4aay E   2 AFKRHIDRLPIIPADAKKHNVTCHFCIVGCGYHAYTWPINKQGGTDPQNNIFGVDLSEQQQAESDAWYSPSMYNVVKQDGRDVHVVIKPDHECVVNSGLGSVRGARMAETSFSEARNTQQQRLTDPLVWRYGQMQPTSWDDALDLVARVTAKIVKEKGEDALIVSAFDHGGAGGGYENTWGTGKLYFEAMKVKNIRIHNRPAYNSEVHGTRDMGVGELNNCYEDAELADTIVAVGTNALETQTNYFLNHWIPNLRGESLGKKKELMPEEPHEAGRIIIVDPRRTVTVNACEQTAGADNVLHLAINSGTDLALFNALFTYIADKGWVDRDFIDKSTLREGTARPPLYPARGVSEANPGHLSSFEDAVEGCRMSIEEAAEITGLDAAQIIKAAEWIGMPKEGGKRRRVMFGYEKGLIWGNDNYRTNGALVNLALATGNIGRPGGGVVRLGGHQEGYVRPSDAHVGRPAAYVDQLLIGGQGGVHHIWGCDHYKTTLNAHEFKRVYKKRTDMVKDAMSAAPYGDREAMVNAIVDAINQGGLFAVNVDIIPTKIGEACHVILPAATSGEMNLTSMNGERRMRLTERYMDPPGQSMPDCLIAARLANTMERVLTEMGDVGYAAQFKGFDWQTEEDAFMDGYNKNAHGGEFVTYERLSAMGTNGFQEPATGFTDGKIEGTQRLYTDGVFSTDDGKARFMDAPWRGLQAPGKQQQKDSHKYLINNGRANVVWQSAYLDQENDFVMDRFPYPFIEMNPEDMAEAGLKEGDLVEIYNDAGATQAMAYPTPTARRGETFMLFGFPTGVQGNVTSAGTNELIIPNYKQTWGNIRKISDAPRNVAHLSFKSKEYQS 844
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441       451       461       471       481       491       501       511       521       531       541       551       561       571       581       591       601       611       621       631       641       651       661       671       681       691       701       711       721       731       741       751       761       771       781       791       801       811       821       831       841   


Chain F from PDB  Type:PROTEIN  Length:132
 aligned with Q6VAL9_9RHIZ | Q6VAL9 from UniProtKB/TrEMBL  Length:175

    Alignment length:132
                                    53        63        73        83        93       103       113       123       133       143       153       163       173  
         Q6VAL9_9RHIZ    44 AAGVEYPANRLANISELTLNEPLDVAYPDEDAAGVLLKLGTRVEGGVGPDGDIVGFSTICPHKGFPLSYSADNKTFNCPGHFSVFDPEKGGQQVWGQATQNLPQYVLRVADNGDIFAEGVDELIYGRLSNVL 175
               SCOP domains d4aayf_ F: automated matches                                                                                                         SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ........eeeee.hhh.....eeee......eeeeee..............eeeee..........eee....eee......ee.hhhh..eee.........eeeee....eeeeeee............ Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 4aay F  44 AAGVEYPANRLANISELTLNEPLDVAYPDEDAAGVLLKLGTRVEGGVGPDGDIVGFSTICPHKGFPLSYSADNKTFNCPGHFSVFDPEKGGQQVWGQATQNLPQYVLRVADNGDIFAEGVDELIYGRLSNVL 175
                                    53        63        73        83        93       103       113       123       133       143       153       163       173  


Chain G from PDB  Type:PROTEIN  Length:843
 aligned with Q6VAL8_9RHIZ | Q6VAL8 from UniProtKB/TrEMBL  Length:845

    Alignment length:843
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441       451       461       471       481       491       501       511       521       531       541       551       561       571       581       591       601       611       621       631       641       651       661       671       681       691       701       711       721       731       741       751       761       771       781       791       801       811       821       831       841   
         Q6VAL8_9RHIZ     2 AFKRHIDRLPIIPADAKKHNVTCHFCIVGCGYHAYTWPINKQGGTDPQNNIFGVDLSEQQQAESDAWYSPSMYNVVKQDGRDVHVVIKPDHECVVNSGLGSVRGARMAETSFSEARNTQQQRLTDPLVWRYGQMQPTSWDDALDLVARVTAKIVKEKGEDALIVSAFDHGGAGGGYENTWGTGKLYFEAMKVKNIRIHNRPAYNSEVHGTRDMGVGELNNCYEDAELADTIVAVGTNALETQTNYFLNHWIPNLRGESLGKKKELMPEEPHEAGRIIIVDPRRTVTVNACEQTAGADNVLHLAINSGTDLALFNALFTYIADKGWVDRDFIDKSTLREGTARPPLYPARGVSEANPGHLSSFEDAVEGCRMSIEEAAEITGLDAAQIIKAAEWIGMPKEGGKRRRVMFGYEKGLIWGNDNYRTNGALVNLALATGNIGRPGGGVVRLGGHQEGYVRPSDAHVGRPAAYVDQLLIGGQGGVHHIWGCDHYKTTLNAHEFKRVYKKRTDMVKDAMSAAPYGDREAMVNAIVDAINQGGLFAVNVDIIPTKIGEACHVILPAATSGEMNLTSMNGERRMRLTERYMDPPGQSMPDCLIAARLANTMERVLTEMGDVGYAAQFKGFDWQTEEDAFMDGYNKNAHGGEFVTYERLSAMGTNGFQEPATGFTDGKIEGTQRLYTDGVFSTDDGKARFMDAPWRGLQAPGKQQQKDSHKYLINNGRANVVWQSAYLDQENDFVMDRFPYPFIEMNPEDMAEAGLKEGDLVEIYNDAGATQAMAYPTPTARRGETFMLFGFPTGVQGNVTSAGTNELIIPNYKQTWGNIRKISDAPRNVAHLSFKSKEYQS 844
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ................eeeeee........eeeeeeee.......hhhhh..................hhh.eeeeee..eeeeeeeee.............hhhhh...................eeee..eeee.hhhhhhhhhhhhhhhhhhhhh...eeeee........hhhhhhhhhhhhhh......eee.........hhhhhhh........hhhhhhh.eeeee..hhhhhhhhhhhhhhhhhhh..hhhhhhhhh........eeeee....hhhhhhhhhhhh...eeee.....hhhhhhhhhhhhhhhhh..hhhhhhhhh......................eeehhhhhhhhhh.hhhhhhhhhh.hhhhhhhhhhhhhh.........eeeeehhhhhh..hhhhhhhhhhhhhhhh.........eee............hhhhh....hhhhhhhh....eeeee..hhhhhh.hhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhh...eeeeee....hhhhhh.eeeeee......eeee....eeeee..........eehhhhhhhhhhhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhee....eee..eee...................eee.........hhhhhhhhh.eeeeee..........hhhhhhhhhhhh...eeeehhhhhhhh......eeeee....eeeeeeee.......eeeee......hhhhhh...............eeeeeeee..hhhhh........... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4aay G   2 AFKRHIDRLPIIPADAKKHNVTCHFCIVGCGYHAYTWPINKQGGTDPQNNIFGVDLSEQQQAESDAWYSPSMYNVVKQDGRDVHVVIKPDHECVVNSGLGSVRGARMAETSFSEARNTQQQRLTDPLVWRYGQMQPTSWDDALDLVARVTAKIVKEKGEDALIVSAFDHGGAGGGYENTWGTGKLYFEAMKVKNIRIHNRPAYNSEVHGTRDMGVGELNNCYEDAELADTIVAVGTNALETQTNYFLNHWIPNLRGESLGKKKELMPEEPHEAGRIIIVDPRRTVTVNACEQTAGADNVLHLAINSGTDLALFNALFTYIADKGWVDRDFIDKSTLREGTARPPLYPARGVSEANPGHLSSFEDAVEGCRMSIEEAAEITGLDAAQIIKAAEWIGMPKEGGKRRRVMFGYEKGLIWGNDNYRTNGALVNLALATGNIGRPGGGVVRLGGHQEGYVRPSDAHVGRPAAYVDQLLIGGQGGVHHIWGCDHYKTTLNAHEFKRVYKKRTDMVKDAMSAAPYGDREAMVNAIVDAINQGGLFAVNVDIIPTKIGEACHVILPAATSGEMNLTSMNGERRMRLTERYMDPPGQSMPDCLIAARLANTMERVLTEMGDVGYAAQFKGFDWQTEEDAFMDGYNKNAHGGEFVTYERLSAMGTNGFQEPATGFTDGKIEGTQRLYTDGVFSTDDGKARFMDAPWRGLQAPGKQQQKDSHKYLINNGRANVVWQSAYLDQENDFVMDRFPYPFIEMNPEDMAEAGLKEGDLVEIYNDAGATQAMAYPTPTARRGETFMLFGFPTGVQGNVTSAGTNELIIPNYKQTWGNIRKISDAPRNVAHLSFKSKEYQS 844
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441       451       461       471       481       491       501       511       521       531       541       551       561       571       581       591       601       611       621       631       641       651       661       671       681       691       701       711       721       731       741       751       761       771       781       791       801       811       821       831       841   


Chain H from PDB  Type:PROTEIN  Length:132
 aligned with Q6VAL9_9RHIZ | Q6VAL9 from UniProtKB/TrEMBL  Length:175

    Alignment length:132
                                    53        63        73        83        93       103       113       123       133       143       153       163       173  
         Q6VAL9_9RHIZ    44 AAGVEYPANRLANISELTLNEPLDVAYPDEDAAGVLLKLGTRVEGGVGPDGDIVGFSTICPHKGFPLSYSADNKTFNCPGHFSVFDPEKGGQQVWGQATQNLPQYVLRVADNGDIFAEGVDELIYGRLSNVL 175
               SCOP domains d4aayh_ H: automated matches                                                                                                         SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ........eeeee.hhh.....eeee......eeeeee..............eeeee..........eee....eee......ee.hhhh..eee.........eeeee....eeeeeee............ Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 4aay H  44 AAGVEYPANRLANISELTLNEPLDVAYPDEDAAGVLLKLGTRVEGGVGPDGDIVGFSTICPHKGFPLSYSADNKTFNCPGHFSVFDPEKGGQQVWGQATQNLPQYVLRVADNGDIFAEGVDELIYGRLSNVL 175
                                    53        63        73        83        93       103       113       123       133       143       153       163       173
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 4)

Asymmetric Unit
(-)
Class: All beta proteins (24004)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4AAY)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4AAY)

(-) Gene Ontology  (7, 11)

Asymmetric Unit(hide GO term definitions)
Chain A,C,E,G   (Q6VAL8_9RHIZ | Q6VAL8)
molecular function
    GO:0051538    3 iron, 4 sulfur cluster binding    Interacting selectively and non-covalently with a 3 iron, 4 sulfur (3Fe-4S) cluster; this cluster consists of three iron atoms, with the inorganic sulfur atoms found between the irons and acting as bridging ligands. It is essentially a 4Fe-4S cluster with one iron missing.
    GO:0051536    iron-sulfur cluster binding    Interacting selectively and non-covalently with an iron-sulfur cluster, a combination of iron and sulfur atoms.
    GO:0046872    metal ion binding    Interacting selectively and non-covalently with any metal ion.
    GO:0030151    molybdenum ion binding    Interacting selectively and non-covalently with molybdenum (Mo) ions.
    GO:0016491    oxidoreductase activity    Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
biological process
    GO:0055114    oxidation-reduction process    A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.

Chain B,D,F,H   (Q6VAL9_9RHIZ | Q6VAL9)
molecular function
    GO:0051537    2 iron, 2 sulfur cluster binding    Interacting selectively and non-covalently with a 2 iron, 2 sulfur (2Fe-2S) cluster; this cluster consists of two iron atoms, with two inorganic sulfur atoms found between the irons and acting as bridging ligands.
    GO:0051536    iron-sulfur cluster binding    Interacting selectively and non-covalently with an iron-sulfur cluster, a combination of iron and sulfur atoms.
    GO:0046872    metal ion binding    Interacting selectively and non-covalently with any metal ion.
    GO:0016491    oxidoreductase activity    Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
biological process
    GO:0055114    oxidation-reduction process    A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.

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  4aay
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  Q6VAL8_9RHIZ | Q6VAL8
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  Q6VAL9_9RHIZ | Q6VAL9
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  Q6VAL8_9RHIZ | Q6VAL8
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  Q6VAL9_9RHIZ | Q6VAL9
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

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